prot_P-littoralis_Contig77.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.9.1
Unique Nameprot_P-littoralis_Contig77.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length229
Homology
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: D7G6X6_ECTSI (RL10P_insert domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X6_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 6.510e-141
Identity = 207/227 (91.19%), Postives = 213/227 (93.83%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEADDMIT 227
            MPRSQRNQKVSLTKT+KKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVR+DFR+DSRFFMGKNKVM+LALGKSEQDEYQDNLRQVSKRLKGQVGLLFT RP EEV TYFKALAVADHAPPGFVH ETIPLPTGSLG+WPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIA F M LLCRWS G FE LAE   D M+T
Sbjct:    1 MPRSQRNQKVSLTKTSKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRLDFREDSRFFMGKNKVMILALGKSEQDEYQDNLRQVSKRLKGQVGLLFTRRPAEEVKTYFKALAVADHAPPGFVHDETIPLPTGSLGDWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIATFTMSLLCRWSEGEFEALAEGTDDAMVT 227          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: A0A835Z2W2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W2_9STRA)

HSP 1 Score: 236 bits (602), Expect = 3.950e-75
Identity = 121/222 (54.50%), Postives = 162/222 (72.97%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEA 222
            MP+S+RN+ VSLT TAKKGR LKQ ++ ++R  +D +  ++VF + N+RS+L+K+VR+DFR DSRFFMGKN +M  ALG S +DEY DNLRQVS+ ++GQ GLL T+R +E V +YF  LAV + A  GF   ETI LP G   +WPV MM+Q RKLG+ VEV++  L  RK  +MC  G+ ++PE AKLL L+D+KI++FK+KL CRWS G FE  A  +A
Sbjct:    1 MPKSKRNKTVSLTSTAKKGRTLKQAVIKDIRDHIDSHQRLFVFRYDNMRSRLMKDVRLDFRGDSRFFMGKNTIMQRALGTSVEDEYSDNLRQVSRHIRGQCGLLVTNRSQEAVLSYFADLAVPEFANAGFFAQETITLPVGPT-QWPVGMMDQLRKLGLQVEVQDSQLWLRKECDMCKKGQALTPEQAKLLTLHDRKISVFKIKLTCRWSEGDFEEYAAPDA 221          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: H3GA64_PHYRM (Ribosome assembly factor mrt4 n=24 Tax=Phytophthora TaxID=4783 RepID=H3GA64_PHYRM)

HSP 1 Score: 209 bits (531), Expect = 1.690e-64
Identity = 109/223 (48.88%), Postives = 155/223 (69.51%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEAD 223
            MP+S+R +   LT+  KKG ELKQ +V  +R  VD Y S YVFSF N+R+   K+VRMDF KDSRFF+GKNKVM LALG+S+++EY +NL ++SK + G  GLLFT++P EEV  YF  L+V+DH   GFV TET+ +P G L ++  SM+E  R LG+ V+++ GV+V  +   +C  G+ ++PE AKLL  +D K+A FK+ +L  WS   ++ +A E+A+
Sbjct:    1 MPKSKRQRTKPLTQANKKGNELKQNVVEAIRNAVDTYASAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGSTGLLFTNKPHEEVVAYFAKLSVSDHPRSGFVATETVTIPEGPLPQFIGSMLESLRGLGLPVDLKNGVIVLSRNYTICKPGQTLTPEQAKLLVHFDHKMAEFKLVMLSLWSKDKYQRIAAEDAN 222          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: M4C3P0_HYAAE (Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3P0_HYAAE)

HSP 1 Score: 207 bits (526), Expect = 9.630e-64
Identity = 110/228 (48.25%), Postives = 159/228 (69.74%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEADDMITS 228
            MP+S+R +  +LT+  KKG ELK+ +V  +R  VD Y S YVFSF N+R+   K+VRMDF KDSRFF+GKNKVM LALG+S++DEY +NL ++SK + G  GLLFT++P +EV  YF  L+V+D+   GFV T+TI +P G L ++  SM+E  R LG+ V+++ GV++  +   +C +G+ ++PE AKLL  +D K+A FK+ +L  WS   +E L+   ADD +TS
Sbjct:    1 MPKSKRQRTKTLTQANKKGNELKKNVVEAIRNAVDTYESAYVFSFQNMRTSHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEDEYAENLFRLSKDVSGNTGLLFTNKPRDEVVDYFAKLSVSDYPRAGFVATDTITIPEGPLPQFIGSMLESLRGLGLPVDLKNGVVMLSRNYTICKSGQTLTPEQAKLLVHFDHKLAEFKLVMLSVWSKDTYERLS---ADDAVTS 224          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: A0A3M6VK82_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VK82_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.930e-63
Identity = 109/222 (49.10%), Postives = 152/222 (68.47%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEA 222
            MP+S+R +   LT+  KKGRELK+ +V  +R  VD Y S Y FS+ N+R+   K VRMDF KDSRFF+GKNKVM LALG+S+++EY +NL ++SK + G  GLLFT++P EEV  YF  L+V+DH   GFV TET+ +P G L ++  SMME  R LG+ V+++ G +V  +   +C  G+ ++PE AKLL  +D K+A FK+ +L  WS   +E LA E+A
Sbjct:    1 MPKSKRQRTKPLTQANKKGRELKKNVVDSIRNAVDTYESAYAFSYQNMRTNHFKNVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLYRLSKDVSGNTGLLFTNKPHEEVMDYFVKLSVSDHPRSGFVATETVTIPEGPLPQFIGSMMESLRGLGLPVDLKNGAIVLSRNYTICKPGQTLTPEQAKLLVHFDHKMAEFKLVMLSVWSKDKYERLATEDA 221          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: A0A3F2RLT2_9STRA (Ribosome assembly factor mrt4 n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLT2_9STRA)

HSP 1 Score: 205 bits (522), Expect = 4.400e-63
Identity = 109/222 (49.10%), Postives = 156/222 (70.27%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEA 222
            MP+S+R +  +LT+  KKG  LKQ +V  VR  VD Y S YVFSF N+R+   K+VRMDF KDSRFF+GKNKVM LALG+S+++EY +NL ++SK + G  GLLFT++P EEV  YF  L+V+D+   GFV TET+ +P G L ++  SM+E  R LG+ V++++GV+V  +   +C  G+ ++PE AKLL  +D+K+A FK+ +L  WS   ++ LA E+A
Sbjct:    1 MPKSKRQRTKALTQADKKGNALKQNVVDAVRNAVDTYTSAYVFSFQNMRTNHFKDVRMDF-KDSRFFLGKNKVMKLALGRSKEEEYAENLFRLSKDVSGNTGLLFTNKPHEEVLDYFSKLSVSDYPRSGFVVTETVTVPEGPLPQFIGSMIESLRGLGLPVDLKKGVVVLSQNYTICKTGQAVTPEQAKLLVHFDRKMAEFKLVVLSVWSKDKYQRLASEDA 221          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: A0A662WXB9_9STRA (Ribosome assembly factor mrt4 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WXB9_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.500e-63
Identity = 110/222 (49.55%), Postives = 155/222 (69.82%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEA 222
            MP+S+R +   LT+  KKG ELKQ +V  VR  VD Y S +VFSF N+R+   KEVRMDF KDSRFFMGKNKVM LALG+S+++EY D+L ++S  + G  GLLFT++P +EV  YF  L+V+D+   GFV TE + +  G L ++  SM+E  R LG+ V++++GV+V  +   +C  G+ ++PE AKLL  +D+K+A FK+ +L  WS GA+E LA E+A
Sbjct:    1 MPKSKRQRSKPLTQANKKGNELKQSVVEAVRNAVDTYASAFVFSFQNMRTNHFKEVRMDF-KDSRFFMGKNKVMKLALGRSKEEEYADDLFRLSNDVSGNSGLLFTNKPHDEVLAYFAKLSVSDYPRSGFVATEVVTISEGPLPQFIGSMVESLRGLGLPVDLKKGVVVLSQDYTICKVGQTLTPEQAKLLVHFDRKMAEFKLVMLSVWSKGAYERLAAEDA 221          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: A0A484EG03_BRELC (Ribosome assembly factor mrt4 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG03_BRELC)

HSP 1 Score: 204 bits (520), Expect = 7.790e-63
Identity = 107/223 (47.98%), Postives = 152/223 (68.16%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEAD 223
            MP+S+R +   LTK  KKG ELK+ +V  +R  V+ Y S++VF+F N+RS   K+VRM+F KDSRFF+GKNKVM LALG+S+++EY  NL  +S  + G  GLLFTS+P +EVTTYF  L++ D    GFV TET+ +P G L ++  SM+E  R LG+ V++ +G +V  +   +C AG+ ++PE AKLL  +D+K+A FK+ LL  WS   +  +A E AD
Sbjct:    1 MPKSKRQRTKPLTKANKKGNELKKSVVDAIRNAVNTYDSIFVFTFQNMRSNHFKDVRMEF-KDSRFFLGKNKVMKLALGRSKEEEYAQNLHCLSNDVSGNTGLLFTSKPYDEVTTYFAKLSIRDFPRSGFVATETVSIPEGPLSQFTGSMLESLRGLGLPVDLRKGTIVLSQNYTICKAGQSLTPEQAKLLVHFDRKMADFKLVLLSGWSNDKYRRIAVESAD 222          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: K3WRY3_GLOUD (Ribosome assembly factor mrt4 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRY3_GLOUD)

HSP 1 Score: 201 bits (511), Expect = 1.680e-61
Identity = 106/219 (48.40%), Postives = 153/219 (69.86%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAE 219
            MP+S+R +  +LTK  KK  +LKQ +V  VR+ VD Y +++ FSFVN+R+   KEVRMDFR DSRFF+GKNKVM +ALG++E +EY DNL ++S+ L G VGLLFT + E+EVT YF  L+  D A  GFV TET+ +P G L ++  SM+E  R LG+ V++++G +V  +   +C  G+ ++PE  KLL  +D+K+A FK+ +L  WS G ++ LA+
Sbjct:    1 MPKSKRQRTKALTKVDKKTSDLKQKVVESVREAVDSYATLFAFSFVNMRTNHFKEVRMDFR-DSRFFLGKNKVMKVALGRTEAEEYADNLSKISRDLNGNVGLLFTDKTEDEVTEYFNKLSEKDFARSGFVATETVQVPQGPLPQFIGSMVESLRTLGLPVDLKKGNVVLNQDYTICKEGQTLTPEQCKLLVHFDRKMAEFKLVMLSSWSKGEYKRLAD 218          
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Match: A0A8K1CRH8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRH8_PYTOL)

HSP 1 Score: 199 bits (506), Expect = 9.590e-61
Identity = 107/225 (47.56%), Postives = 152/225 (67.56%), Query Frame = 0
Query:    1 MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRSKLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQVGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSMMEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAIFKMKLLCRWSGGAFETLAEEEADDM 225
            MPRS+R +   LTK+ KKG ELKQ +V  +R+ VD Y S Y FSF N+R+   KEVR+DFR DSRFF+GKNKVM LALG+++++EY D+L +++  + G VGL FT+R  +EV  YF  L+  D A  GFV TE + +P G L ++  S +E  R LG+ V++++GV+V R+   +C  G+ ++PE A+LL  +D+K+A FK+  L  WS G+FE LAE     M
Sbjct:    1 MPRSRRQRVKPLTKSEKKGSELKQRVVDSIREAVDTYESAYAFSFQNMRTNHFKEVRLDFR-DSRFFLGKNKVMKLALGRTKEEEYADDLFKLAADVNGSVGLFFTNRDRQEVIDYFNKLSFTDFARSGFVATEAVSVPEGPLPQFIGSQLESLRTLGLPVDLKKGVVVLRQDYTICKEGQTLTPEQARLLQHFDRKMATFKLTPLSVWSKGSFERLAENPEAGM 224          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X6_ECTSI6.510e-14191.19RL10P_insert domain-containing protein n=2 Tax=Ect... [more]
A0A835Z2W2_9STRA3.950e-7554.50Ribosome assembly factor mrt4 n=1 Tax=Tribonema mi... [more]
H3GA64_PHYRM1.690e-6448.88Ribosome assembly factor mrt4 n=24 Tax=Phytophthor... [more]
M4C3P0_HYAAE9.630e-6448.25Ribosome assembly factor mrt4 n=1 Tax=Hyaloperonos... [more]
A0A3M6VK82_9STRA1.930e-6349.10Ribosome assembly factor mrt4 n=1 Tax=Peronospora ... [more]
A0A3F2RLT2_9STRA4.400e-6349.10Ribosome assembly factor mrt4 n=1 Tax=Phytophthora... [more]
A0A662WXB9_9STRA5.500e-6349.55Ribosome assembly factor mrt4 n=2 Tax=Nothophytoph... [more]
A0A484EG03_BRELC7.790e-6347.98Ribosome assembly factor mrt4 n=1 Tax=Bremia lactu... [more]
K3WRY3_GLOUD1.680e-6148.40Ribosome assembly factor mrt4 n=1 Tax=Globisporang... [more]
A0A8K1CRH8_PYTOL9.590e-6147.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR04063760S ribosomal protein L10P, insertion domainPFAMPF17777RL10P_insertcoord: 128..193
e-value: 1.7E-10
score: 40.7
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 19..120
e-value: 2.0E-21
score: 76.0
IPR043141Ribosomal protein L10-like domain superfamilyGENE3D3.30.70.1730coord: 29..210
e-value: 1.9E-57
score: 195.8
IPR043141Ribosomal protein L10-like domain superfamilySUPERFAMILY160369Ribosomal protein L10-likecoord: 20..153
IPR04316450S ribosomal protein L10, insertion domain superfamilyGENE3D3.90.105.20coord: 125..198
e-value: 1.9E-57
score: 195.8
NoneNo IPR availablePANTHERPTHR45841MRNA TURNOVER PROTEIN 4 MRTO4coord: 1..222
IPR033867Ribosome assembly factor Mrt4CDDcd05796Ribosomal_P0_likecoord: 21..156
e-value: 9.37349E-59
score: 180.852

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:40022..42951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.9.1mRNA_P-littoralis_Contig77.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 39145..43239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.9.1 ID=prot_P-littoralis_Contig77.9.1|Name=mRNA_P-littoralis_Contig77.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp
MPRSQRNQKVSLTKTAKKGRELKQGIVSEVRKCVDEYPSVYVFSFVNLRS
KLLKEVRMDFRKDSRFFMGKNKVMMLALGKSEQDEYQDNLRQVSKRLKGQ
VGLLFTSRPEEEVTTYFKALAVADHAPPGFVHTETIPLPTGSLGEWPVSM
MEQFRKLGVVVEVEEGVLVNRKAINMCTAGEPISPEGAKLLALYDKKIAI
FKMKLLCRWSGGAFETLAEEEADDMITS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040637RL10P_insert
IPR001790Ribosomal_L10P
IPR043141Ribosomal_L10-like_sf
IPR043164RL10_insert_sf
IPR033867Mrt4