prot_P-littoralis_Contig768.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig768.1.1
Unique Nameprot_P-littoralis_Contig768.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1195
Homology
BLAST of mRNA_P-littoralis_Contig768.1.1 vs. uniprot
Match: D7FYC3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYC3_ECTSI)

HSP 1 Score: 844 bits (2181), Expect = 5.440e-286
Identity = 567/1225 (46.29%), Postives = 714/1225 (58.29%), Query Frame = 0
Query:    9 FTQLKQRAR-SSFVGKHRLDVILHSRLQDGPKYVSMSSLKSAFGVAGLVLTEEEAEYLLKRFADNRKQVEWRKLTVALDVAAPVDFTDPDRSFLDNLPQPYRLIVSVLETEIVDRAWALIVERHPELDTSVADETRAAAEIDLKRSCPPSLLLENPHPPLLLGGARQVEAVTSVATANAKAVRVDKGESDADERRSPTQPTQGDDGDIIDANADADRSTDXXXXXXXXVALLQWDPVGELLFTGGRDGSVCLRVEGALDDIAVQVNSRGVAADA-SEGTEEKPAPSTVNFLSRPVGALRGGPSSVRIAVVVTPTEKYGGVEGENGESGKEHDGERGGVAAGETSNDPVVTPLTTRPSSCISVLEVALPEPKGNADNDDSTTNGS---PQRLRPSHTAGDSHSCSHGTKRPTLRAVCVVKLSSSEE---AVACALSPDGKRLAVSLSSGRIAIWVLPPFNPPSRGH--------------LLSAQPNVLCSRGGNSEDDPGEHSPAIKTTATYQNDGASLGESSTSLSGDDD---AATLAKAEAAAATEAAANGPPVQLRQPEFSIPHLPSPEELTYTNALHEYRRKVETGELQEPTSSPGMGDGEEEGTTPPPRPPQLSGCAHHFAHVAFLP--EGVVDGGGXXSDGGGLSVWRTNSNVWRLYRLPPPLVDEADGATRGQGEDAANGNGGGTAEVSCAVT-GGDAKVEGNTEVGGGCDIMMAARFDISSLPSAEWVLPSPITALAVSEDAAGEHFEQGGYEVHAATEGGAGGDWSCCSTQAAELLPLVAIGTENGGVYVCDAVLGTAREGLSRHRSRVTALAFYGKTFLVSGSADEMLQIHHVSIAAGADAAGGDGGGRGRCCTGGTPRLRCLHDARGSGIVRVACLRAAPLVFAEDISGRIVAYDLLSGSMLGVLALASDSVASATTTKPGNHGAGAAATAKTAVQKNGVVWAGGGNYLAAAVPAGKPAGKEALPRSLHGGGESLGVWSAADVMWELSPGMRSIAGGVRPLSPSDVAGMFFDLVPAQRKVNYLQVKTNLHQHNPYR-DSHSLRVGT--PTRAASATNSTNAHRYRTPAGXXXXXXXXIERGSRPSRANDVSXXXXXXXXRSAVSKMASTNDMMADDLEKTLRNYNHRPTLTEGNVARLPAVND------GKLRATGFSG--GEEGFGDSRVGVPWRREVGAVERVKRYMESRGGGRVARQARLDNVTQNLLHAL 1194
            F  L+QR R +SFVG        HSRL DGPKYVS+S+LKSAFGVAG+VLTE+E  YL+K+FADNR++++W++L +ALDV  P DFTDPDRSFLDNLPQPYRLIVSVLETEIVDRAW L+VERHPELDTS ADE RAAA+IDLKRSC P + L +PH PL    A  V+ V + A    +A+  D      D R S     +G      D N DAD            V+ +QWD  G+ LFTGGRDGSVC+R+ GA+ DI VQ+ S  +  +  SEG  +  A   V FLSRPVG+L G  SSVRIA VVT +    G  G   ++G    G++      ET  D    P    PSS +SVLE+ +P  +   +   S   GS    Q  R  H A  ++S +     P  R +C V+L S +E   AV+C LSPDG+RLAV+ +SGR++ W LPP + P   H              +   QP    +  G+  + P E     +        GA +GES   L+G DD                         QL QPEF+IPH+PSPEEL++  AL EYR++VE GE+QEPTS+               +PPQLSG AHH A V F+P  +G ++GGG  +  GGL+VWR+NSNV RL+RLPPP+ D  DG   GQ +    GN  G  E+S   T    +  E   + G G +  +AA++DIS LPS EWVLPSPIT LAV E+  G   +  G E         GG WSCC    A   PLVAIGTENGGVY+ DA LGT R GLSRHR+RVTALAF+GK FLVSGS DEM+QIHH+++A     AGGD     R C GGTPRLRCLHDARGSGIVR+AC R  PL  AED SGR+V YDLLSG+MLGVLAL  D++ S    +P  +G GAA + +T   K G++W+ GG  +A  +P  +     +  RS   GGE+LGVWSA+D+MWELSPGMR++ G  RPLSP DVA +F+ L+P  RK   + ++   HQ++P R D+  L  GT  P  A++ T +       T +G        ++R + P RA            + A S   STN +  +   +T  +Y H  TLTE NVARL           G L  TG  G  G++G        PW  EVGA  RVKRYME+R   R  RQARL+NVT+NLL AL
Sbjct:    5 FAHLRQRFRLASFVG-------WHSRLADGPKYVSLSALKSAFGVAGVVLTEDEVGYLVKKFADNRRRIDWKRLMIALDVGPPADFTDPDRSFLDNLPQPYRLIVSVLETEIVDRAWELVVERHPELDTSPADEARAAADIDLKRSCHPFVRLLDPHSPLP-AHAGDVKPVAAAAK-EGEAIAAD---GFLDGRGSSELLFEG-----KDRNGDADDDGGGGENDAGNVSTMQWDNRGQFLFTGGRDGSVCVRLAGAVKDIGVQIRSSSLCGETFSEGNAKSAA---VTFLSRPVGSLGGRSSSVRIAAVVTSSCPDSG-HGNPDQTGNREAGQQ------ETERDAGAEPRPACPSSAVSVLEMTVPRSRAGDEAGGSPARGSLEHHQGARSEHGADAANSGNRRNYAPAFRVICTVELHSEQENATAVSCTLSPDGRRLAVTTASGRVSTWSLPPVSAPLERHRNRSPQQSAREDDDVDGVQPGSSRTSAGHGRETPKEGMAGQQGGER----GAGVGESGAVLAGRDDDXXXXXXXXXXXXXXXXXXXXXXXTQLGQPEFTIPHVPSPEELSHAKALQEYRKRVEAGEIQEPTSTQEXXXXXXXXXXX--KPPQLSGLAHHLARVDFIPAADGRLNGGGGST--GGLAVWRSNSNVCRLFRLPPPVYD-GDG---GQRQTVEGGNNDGGVELSRTGTVAASSGFESADKTGIGSEGSLAAKYDISRLPSVEWVLPSPITVLAVCEEETGGEAQDDGREK--------GGGWSCCGGADAPA-PLVAIGTENGGVYLGDAALGTTRAGLSRHRARVTALAFHGKRFLVSGSDDEMIQIHHLTVAD-PTGAGGD-----RRCVGGTPRLRCLHDARGSGIVRLACFREMPLAVAEDTSGRVVVYDLLSGTMLGVLALKDDAITSVAADRPDRNGDGAAVSHETVAPKAGIIWSEGGECMAVVMPQEQETSVLSPTRS-DSGGETLGVWSASDLMWELSPGMRAMVGEERPLSPRDVAELFYGLLPRYRKDPEIMLQNMSHQYDPGRGDTAPLTTGTTNPDPASTRTKAGGRSSRGTGSGSGR-----LDRSNTPQRA----AGRDRVAAKKAPSNTVSTN-VTRNPTTRTPPHYQHPTTLTERNVARLLGAGGRGGPMGGVLACTGEGGAVGKDGP------APWGMEVGAAARVKRYMEARHTERAVRQARLENVTRNLLQAL 1158          
BLAST of mRNA_P-littoralis_Contig768.1.1 vs. uniprot
Match: A0A7S2RZG0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZG0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.040e-7
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   53 AGLVLTEEEAEYLLKRFADNRKQVEWRKLTVALDVAAPVDFTDPDRSFLDNLPQPYRLIVSVLETEIVDRAWALIVERHPEL 134
            +G+ L E +   +   FAD +  V++RK   +L +A P D++DP   F D LPQPYR+I+ V+E EI++ AW  +  RHPEL
Sbjct:   91 SGIRLQEADCTAITMVFADWQGDVDYRKWWRSLQIAKPSDYSDPALHF-DTLPQPYRMILKVMEQEILEPAWEELCVRHPEL 171          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig768.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYC3_ECTSI5.440e-28646.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RZG0_9STRA1.040e-742.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 222..261
e-value: 15.0
score: 9.6
coord: 784..822
e-value: 3.4
score: 13.6
coord: 416..454
e-value: 2.6
score: 14.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 348..877
e-value: 2.7E-8
score: 35.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 567..604
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1053..1090
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 497..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..409
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 224..645
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 231..906

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig768contigP-littoralis_Contig768:6127..12863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig768.1.1mRNA_P-littoralis_Contig768.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig768 6127..12863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig768.1.1 ID=prot_P-littoralis_Contig768.1.1|Name=mRNA_P-littoralis_Contig768.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1195bp
MTSSSGRVFTQLKQRARSSFVGKHRLDVILHSRLQDGPKYVSMSSLKSAF
GVAGLVLTEEEAEYLLKRFADNRKQVEWRKLTVALDVAAPVDFTDPDRSF
LDNLPQPYRLIVSVLETEIVDRAWALIVERHPELDTSVADETRAAAEIDL
KRSCPPSLLLENPHPPLLLGGARQVEAVTSVATANAKAVRVDKGESDADE
RRSPTQPTQGDDGDIIDANADADRSTDSGGGGGGGVALLQWDPVGELLFT
GGRDGSVCLRVEGALDDIAVQVNSRGVAADASEGTEEKPAPSTVNFLSRP
VGALRGGPSSVRIAVVVTPTEKYGGVEGENGESGKEHDGERGGVAAGETS
NDPVVTPLTTRPSSCISVLEVALPEPKGNADNDDSTTNGSPQRLRPSHTA
GDSHSCSHGTKRPTLRAVCVVKLSSSEEAVACALSPDGKRLAVSLSSGRI
AIWVLPPFNPPSRGHLLSAQPNVLCSRGGNSEDDPGEHSPAIKTTATYQN
DGASLGESSTSLSGDDDAATLAKAEAAAATEAAANGPPVQLRQPEFSIPH
LPSPEELTYTNALHEYRRKVETGELQEPTSSPGMGDGEEEGTTPPPRPPQ
LSGCAHHFAHVAFLPEGVVDGGGGGSDGGGLSVWRTNSNVWRLYRLPPPL
VDEADGATRGQGEDAANGNGGGTAEVSCAVTGGDAKVEGNTEVGGGCDIM
MAARFDISSLPSAEWVLPSPITALAVSEDAAGEHFEQGGYEVHAATEGGA
GGDWSCCSTQAAELLPLVAIGTENGGVYVCDAVLGTAREGLSRHRSRVTA
LAFYGKTFLVSGSADEMLQIHHVSIAAGADAAGGDGGGRGRCCTGGTPRL
RCLHDARGSGIVRVACLRAAPLVFAEDISGRIVAYDLLSGSMLGVLALAS
DSVASATTTKPGNHGAGAAATAKTAVQKNGVVWAGGGNYLAAAVPAGKPA
GKEALPRSLHGGGESLGVWSAADVMWELSPGMRSIAGGVRPLSPSDVAGM
FFDLVPAQRKVNYLQVKTNLHQHNPYRDSHSLRVGTPTRAASATNSTNAH
RYRTPAGGGGGGAAAIERGSRPSRANDVSGGGGGGGGRSAVSKMASTNDM
MADDLEKTLRNYNHRPTLTEGNVARLPAVNDGKLRATGFSGGEEGFGDSR
VGVPWRREVGAVERVKRYMESRGGGRVARQARLDNVTQNLLHAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf