prot_P-littoralis_Contig754.6.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig754.6.2
Unique Nameprot_P-littoralis_Contig754.6.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length187
Homology
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: D8LJ72_ECTSI (Photosystem II 11 kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ72_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 5.710e-89
Identity = 148/186 (79.57%), Postives = 156/186 (83.87%), Query Frame = 0
Query:    3 PAATRSGATSVARP-ASSTVCMSMADEGVSRKNAIAAFSAGAAAMLGAAAVPAXXFXXXXXXXXXXXPAATS-DGPPKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            P A R+GATS     +SS VCMS+ DE +SRKNAIAAFSAGAAA+LGAAAVPA  F           PAA S DGPP DWGLTKQYYPDA+KMVRHMRYCTNMEKGDP M+DIA NCKKEMVEFVSNYRRS  INGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQE+TDIERAIKRQR
Sbjct:   23 PLAARTGATSXXXXXSSSAVCMSVGDEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPA--PAAVSEDGPPSDWGLTKQYYPDASKMVRHMRYCTNMEKGDPYMADIANNCKKEMVEFVSNYRRSSNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.320e-51
Identity = 78/110 (70.91%), Postives = 97/110 (88.18%), Query Frame = 0
Query:   77 PKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            P DWGLTK YY DA+K+V HMRY T+MEKG  N+ ++A NC++EM++FVS YRR P ++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL++E++ I++AIKRQR
Sbjct:   75 PVDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLMEEYSQIDKAIKRQR 184          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 169 bits (429), Expect = 3.120e-50
Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 0
Query:   69 PAATSDGP-PKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            PA    GP P DWGLTK YY DA+K+V HMRY T++EKG   +   A NC++EM++FVS YRR P ++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRLL+E+  IE+AIKRQR
Sbjct:   78 PAKAPLGPMPTDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLLEEYNQIEKAIKRQR 196          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 2.420e-48
Identity = 77/123 (62.60%), Postives = 96/123 (78.05%), Query Frame = 0
Query:   69 PAATSDGP-----PKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            P A ++ P     PKDWG+T  YY DAAK+V HMR  T++EKG PNM  IALNCKKEM++FVS YRR   ++GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QE+ ++E+ IK++R
Sbjct:   12 PPAEAEAPAPVEFPKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQEYAEVEKNIKKRR 134          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 6.190e-45
Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 0
Query:   69 PAATSDGPPK-DWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            PA+T  GPP  DWGL+ QYY DA ++V HMRY T M K  PN   IA NCKKEM++FVS YRR P + GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRLLQE+ +IE+ IKR R
Sbjct:   90 PASTELGPPPTDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQEYAEIEKNIKRSR 208          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.430e-44
Identity = 71/110 (64.55%), Postives = 88/110 (80.00%), Query Frame = 0
Query:   77 PKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            P DWGLT +YY DA ++V HMRY T+M KG PN  +IA +CKKEM++FVS YRR P + GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL QE+ +IE+ IKRQR
Sbjct:   95 PTDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQEYAEIEKNIKRQR 204          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 149 bits (377), Expect = 4.290e-42
Identity = 72/119 (60.50%), Postives = 93/119 (78.15%), Query Frame = 0
Query:   69 PAATSDGP-PKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            PA    GP P D+ +  +YYPDA  +V++MRY T M+KG PNM  I  + +K+MV+FV+ YRR+  +NG+LSYS LYTSI+VLAGHYASYGPKFPVPEKRRKRLLQE+ DIE+ +++ R
Sbjct:  100 PAKPDMGPVPTDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQEYNDIEKNMRKNR 218          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.000e-40
Identity = 68/110 (61.82%), Postives = 87/110 (79.09%), Query Frame = 0
Query:   77 PKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            P ++G+T+ YY DAAK+V HMR  T+++KG PN+  IA+  KKEM  FV+ YRR  T+ GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QE+ +IE+ IKR+R
Sbjct:   74 PTNYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYDEIEKNIKRKR 183          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: A0A6V1P1T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1T2_HETAK)

HSP 1 Score: 141 bits (356), Expect = 2.730e-39
Identity = 67/115 (58.26%), Postives = 90/115 (78.26%), Query Frame = 0
Query:   75 GPPKD---WGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            GP  D   + L  +YY DAA+MV++MRY T M+K  P+   IA++ KK+M++F+S YRR P ++GK+SYS LYTS++VLAGHYASYG KFPVPEKRRKRL QE+ +IE+ +K+QR
Sbjct:   75 GPAPDAASYKLKYEYYADAAQMVKNMRYATFMDKSTPDFEKIAISTKKQMIDFISYYRRFPNVSGKMSYSTLYTSVNVLAGHYASYGTKFPVPEKRRKRLAQEYAEIEKNLKKQR 189          
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.630e-39
Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 0
Query:   76 PPKDWGLTKQYYPDAAKMVRHMRYCTNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR 186
            PP ++ L+K+YY DAA++V HM+Y T M +  PN  +IA + K EM +FVS YRR   + GK S+S LYT+I+V+AGHYASYGPKFP+PEKRRKRL QEFT+I+R IKR R
Sbjct:   80 PPVNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQEFTEIDRNIKRNR 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig754.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ72_ECTSI5.710e-8979.57Photosystem II 11 kDa protein n=2 Tax=Ectocarpus T... [more]
A0A836C8X1_9STRA1.320e-5170.91Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A836CEQ5_9STRA3.120e-5068.91Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S3ZPN6_9STRA2.420e-4862.60Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U8B8_9STRA6.190e-4563.87Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XRA0_9STRA4.430e-4464.55Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UVY8_9STRA4.290e-4260.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3NKQ6_9STRA1.000e-4061.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6V1P1T2_HETAK2.730e-3958.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TYA6_9STRA5.630e-3960.36Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025585Photosystem II Pbs27PFAMPF13326PSII_Pbs27coord: 44..181
e-value: 3.0E-29
score: 102.1
IPR025585Photosystem II Pbs27PANTHERPTHR34041PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 19..186
IPR025585Photosystem II Pbs27HAMAPMF_01481PSII_Psb27coord: 41..182
score: 23.719017
IPR038450Photosystem II Pbs27 superfamilyGENE3D1.20.58.810Photosystem II Pbs27coord: 77..186
e-value: 1.2E-32
score: 114.5
NoneNo IPR availablePANTHERPTHR34041:SF1PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 19..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig754contigP-littoralis_Contig754:12145..17206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig754.6.2mRNA_P-littoralis_Contig754.6.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig754 10969..17210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig754.6.2 ID=prot_P-littoralis_Contig754.6.2|Name=mRNA_P-littoralis_Contig754.6.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=187bp
MAPAATRSGATSVARPASSTVCMSMADEGVSRKNAIAAFSAGAAAMLGAA
AVPAAVFAAEEAAAPAVAPAATSDGPPKDWGLTKQYYPDAAKMVRHMRYC
TNMEKGDPNMSDIALNCKKEMVEFVSNYRRSPTINGKLSYSNLYTSISVL
AGHYASYGPKFPVPEKRRKRLLQEFTDIERAIKRQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025585PSII_Pbs27
IPR038450PSII_Pbs27_sf