prot_P-littoralis_Contig752.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig752.12.1
Unique Nameprot_P-littoralis_Contig752.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length508
Homology
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A6H5JXQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ5_9PHAE)

HSP 1 Score: 383 bits (983), Expect = 1.530e-125
Identity = 347/508 (68.31%), Postives = 368/508 (72.44%), Query Frame = 0
Query:    1 MKPGGGTGSEPAKPKFRPKAQAKXXXXXXXXXVTDYRGAAANYRAGRAGGAEVDGGGGGRXXXXXXXYGGREGGRGGRHWQGFRXXXXXXXXXXXXXXXXXXXXXRGGFIPVGQDFFVGGGGSGPTAYMPAGIS--VEDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFGVGAPVSNEKKXXXXXXXDVMGLTGGSGADIGRKPRSSKLPGMRVTGNVMSEDDSMRPVALPVTATAQAPGTRLFAQGDNQAELTEEEDSSLFFVQLPTKLPRPLPAFQRGKEDASSXXXXXXXXXXXXXXXXXXSSAGGLQVKEEMG---AGSAAGGGAXXXXXXXXAEKASGMAAENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGGSGSHGGGLDGGLQGAGSGVDDPGGPVK 503
            MKPG G GSE AKPKFRPKAQA+  XXXXXXXVTDYRGAAANYR+G   G                                             XXXXXXXXXX GGF+PVGQDFFVGGGGSGP AYMPAG++       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MFGVG  VS   K       DV+ L G   +D+GR+ RSSKLPGMRVTGNVMSEDDSMRPVALPVTATAQ PG+RLFAQ +NQAELTEEEDSSLFFVQLPTKLPRPL AFQRGK+ AS+                   + GG  VKEE G   AG       XXXX    AEKAS + A++ AFDQGLRRMR GKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDA++KTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGG     GG DG   GAG+G  D GGP +
Sbjct:    1 MKPGDGKGSERAKPKFRPKAQARKKXXXXXXXVTDYRGAAANYRSGGGAGXXXX-----------------------------------------XXXXXXXXXXXGGFVPVGQDFFVGGGGSGPAAYMPAGVTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENMFGVGESVS---KGGGGKEGDVLTLIG---SDVGRRSRSSKLPGMRVTGNVMSEDDSMRPVALPVTATAQTPGSRLFAQANNQAELTEEEDSSLFFVQLPTKLPRPLAAFQRGKDGASAPVRGKGKG----------KATGGPAVKEEAGESGAGXXXXXXXXXXXKGAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGG-----GGEDGFEGGAGAG-GDVGGPSE 445          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: D8LHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB7_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 1.600e-90
Identity = 330/492 (67.07%), Postives = 347/492 (70.53%), Query Frame = 0
Query:   33 VTDYRGAAANYRAGRAGGAEVDGGGGGRXXXXXXXYGGREGGRGGRHWQGF------RXXXXXXXXXXXXXXXXXXXXXRGGFIPVGQDFFVGGGGSGPTAYMPAGISVEDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MFGVGAPVSNEKKXXXXXXXDVMGLTGGSGADIGRKPRSSKLPGMRVTGNVMSEDDSMRPVALPVTATAQAPGTRLFAQGDNQAELTEEEDSSLFFVQLPTKLPRPLPAFQRGKEDASSXXXXXXXXXXXXXXXXXXSSAGGLQVKEEMG---AGSAAGGGAXXXXXXXXAEKASGMAAENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGG------SGSHGGGLDGGLQGAGSGVDDPGGPVKMEVA 507
            VTDYRGAAANYR+GR  GA  DGG  G    XXXX      GRG R WQG        XXXXXXXXXXXXXXXXXXXXXRGGF+PVGQDFFVGGGGSGP AYMPAG++     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  MFGVG  VS   K       DV+ L G   +D+GR+ RSSKLPGMR                                   NQAELTEEEDSSLFFVQLPTKLPRPL A QRGK+ AS+       XXXX        + GG  VKEE G   AG       XXXXXXXXAEKAS +AA++ AFD+GLRRMR GKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDA++KTFCSFGQVTKRAVCTPDFEQLYRRADEISGGG        G  GG   GG         D GGPVKMEVA
Sbjct:   84 VTDYRGAAANYRSGRGAGAGEDGGERGDVWGXXXXXXXXXRGRGDRPWQGTGGRDGRXXXXXXXXXXXXXXXXXXXXXXRGGFVPVGQDFFVGGGGSGPAAYMPAGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMFGVGESVS---KGGGGKGGDVLTLIG---SDVGRRSRSSKLPGMR-----------------------------------NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXX--------ATGGPAVKEEAGESGAGXXXXXXXXXXXXXXXAEKASEIAADDVAFDRGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGXXXXXXXDGFEGGXXXGG---------DVGGPVKMEVA 517          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A835ZEC9_9STRA (RNA polymerase III RPC4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC9_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.110e-22
Identity = 76/215 (35.35%), Postives = 109/215 (50.70%), Query Frame = 0
Query:  253 MRVTGNVMSEDDSMRPVALPVTATAQAPGTRLFAQGDNQAELTEEEDSSLFFVQLPTKLPRPLPAFQRGKEDASSXXXXXXXXXXXXXXXXXXSSAGGLQVKEEMGAGSAAGGGAXXXXXXXXAEKASGMAAENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQLYRR 467
            M+V GN     D +RP+ +P +         LFA+  + A L  EED  +FFVQLPT LPR  P       ++              XXXXX  + GG + +   GA +AA                SG A  +P +D  L  M  G+IGKL + +SG  +L++ GV+L V  G+P  FVE+   ++ ++KT   FGQVT+R VC P+FE L+ +
Sbjct:  251 MKVLGNAFQPHDVLRPIVIPFSKNTAVRPEDLFARPHDAAALQAEEDEGIFFVQLPTALPRVFP-------ESMEHPSQPTDGGGDGXXXXXHGAVGGTRAQ---GAKAAA--------------DTSGEADGSPGYDNSLTTMLPGRIGKLQIRRSGTVQLLLAGVALDVSAGMPCHFVEELTCVNPKQKTMSMFGQVTRRLVCAPNFEDLHEQ 441          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A7S2XXH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXH9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.400e-18
Identity = 40/85 (47.06%), Postives = 62/85 (72.94%), Query Frame = 0
Query:  385 ENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQLYRRAD 469
            E+   D+ LR++ +G++GKL +H+SGK +L IGG++  V PGLP  F +  ++ID  +K  C FG+V+KR VCTPDFEQL+++ +
Sbjct:   28 EDVIHDKSLRQLPSGRLGKLRIHRSGKVKLWIGGMAFEVSPGLPCRFAQDVIAIDKEQKKCCFFGEVSKRLVCTPDFEQLFQKRE 112          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A7S3UWU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWU6_HETAK)

HSP 1 Score: 89.0 bits (219), Expect = 8.780e-18
Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 0
Query:  381 GMAAENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQLYRRADE 470
            G   E+P  D GLRR+  G++G++ VH SG+ +L +G     V PGLP  FV+  V++DA   T C FGQ++KR VCTPDFE+L+   ++
Sbjct:    1 GEEEEDPVADGGLRRVAPGRVGRVRVHASGRVKLTLGDTVFDVAPGLPCHFVQDVVAVDAEGGTACFFGQLSKRVVCTPDFEKLFAEKEK 90          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: W4GQG3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQG3_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.730e-9
Identity = 53/166 (31.93%), Postives = 68/166 (40.96%), Query Frame = 0
Query:  299 DSSLFFVQLPTKLPRPLPAFQRGKEDASSXXXXXXXXXXXXXXXXXXSSAGGLQVKEEMGAGSAAGGGAXXXXXXXXAEKASGMAAENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQL 464
            + +LFFVQLPT LP   P    GKE AS                   SS  G + +                                  FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P SF E+ VSID + K     G V    V TPDF+ L
Sbjct:  226 NDTLFFVQLPTTLPYTAPLSGVGKETASK------------------SSENGTETR----------------------------------FDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPVATHLVITPDFDSL 339          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A6G0WW31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW31_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.360e-9
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0
Query:  384 AENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQLYR 466
            +++  FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P +F E+ VSID +++     G V+   V TPDFE L R
Sbjct:  248 SQDDLFDKSLHAMPGGFMGKINIHKSGKAVLVLGDKTFNIAPGHPPTFYEEAVSIDTKEELLSMLGPVSHHLVVTPDFEALLR 330          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A6A5AC38_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AC38_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.060e-9
Identity = 64/207 (30.92%), Postives = 84/207 (40.58%), Query Frame = 0
Query:  263 DDSMRPVALPVTATAQAPGTRLFAQGDNQAELTEE---EDSSLFFVQLPTKLPRPLPAFQRGKEDASSXXXXXXXXXXXXXXXXXXSSAGGL--QVKEEMGAGSAAGGGAXXXXXXXXAEKASGMAAENPAFDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQL 464
            + +M+P+ LP    +Q       A GD   + T      + +LFFVQLPT LP   P    GKE AS                   SS  G   Q    +  G                            FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P SF E+ VSID + K     G V    V TPDF+ L
Sbjct:  182 ESAMQPMELPFGRPSQHTND---AGGDVFCDETGAFVVGNDTLFFVQLPTTLPYTAPLSGDGKETASK------------------SSENGTLPQTPNRIYVG-----------------------LTETRFDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPVATHLVITPDFDSL 344          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A1W0AB28_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB28_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.680e-9
Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 0
Query:  389 FDQGLRRMRAGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQL 464
            FD  L  M +G +GK+ +H+SGKA LV+G  +  + P  P +F E+ VSID   +     GQ+T   V TPDFE L
Sbjct:  246 FDNALNNMPSGYLGKIQIHKSGKAVLVLGDKTFDIAPAQPPTFYEELVSIDTNDRVLSHLGQITNHLVITPDFESL 321          
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Match: A0A7S3VAP1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 6.990e-8
Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0
Query:  389 FDQGLRRMRAGKIGKLYVHQSGKARLVIGG-------VSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQVTKRAVCTPDFEQLY 465
            +D  L+   AGK GK+ +H+SGKA LV+GG       V +++  GLP  F++Q V+ID    ++   G+V K  V TPD E  +
Sbjct:  434 YDDTLKDSAAGKYGKIVIHKSGKAYLVVGGADSKTPQVKMMLTEGLPCGFLQQAVAIDPNNASYVPLGEVKKTLVATPDIESAF 517          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig752.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXQ5_9PHAE1.530e-12568.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHB7_ECTSI1.600e-9067.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZEC9_9STRA4.110e-2235.35RNA polymerase III RPC4-domain-containing protein ... [more]
A0A7S2XXH9_9STRA1.400e-1847.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3UWU6_HETAK8.780e-1845.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W4GQG3_9STRA2.730e-931.93Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0WW31_9STRA3.360e-940.96Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A5AC38_9STRA5.060e-930.92Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A1W0AB28_9STRA5.680e-943.42Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S3VAP1_9STRA6.990e-839.29Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007811DNA-directed RNA polymerase III subunit RPC4PFAMPF05132RNA_pol_Rpc4coord: 300..461
e-value: 4.8E-24
score: 85.4
IPR007811DNA-directed RNA polymerase III subunit RPC4PANTHERPTHR13408DNA-DIRECTED RNA POLYMERASE IIIcoord: 8..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig752contigP-littoralis_Contig752:70312..82049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig752.12.1mRNA_P-littoralis_Contig752.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig752 70206..82418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig752.12.1 ID=prot_P-littoralis_Contig752.12.1|Name=mRNA_P-littoralis_Contig752.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=508bp
MKPGGGTGSEPAKPKFRPKAQAKKKPAPPPPPVTDYRGAAANYRAGRAGG
AEVDGGGGGRGYGRGRGYGGREGGRGGRHWQGFRSGGGGGRDGRGGRGGR
GRGRGRGGFIPVGQDFFVGGGGSGPTAYMPAGISVEDGGGGGGGGRGGGD
TSESEDEQARKRLSRMSKTKKEDTKSGGGGGAAGAGRERKPLSSGAGGEG
DGMDDDEDMFGVGAPVSNEKKEDEEDEDDVMGLTGGSGADIGRKPRSSKL
PGMRVTGNVMSEDDSMRPVALPVTATAQAPGTRLFAQGDNQAELTEEEDS
SLFFVQLPTKLPRPLPAFQRGKEDASSSAAASAGSSKGKGKGKGKSSAGG
LQVKEEMGAGSAAGGGAAGAAGSGGAEKASGMAAENPAFDQGLRRMRAGK
IGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDARKKTFCSFGQ
VTKRAVCTPDFEQLYRRADEISGGGGSGSHGGGLDGGLQGAGSGVDDPGG
PVKMEVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007811RPC4