prot_P-littoralis_Contig750.8.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig750.8.1
Unique Nameprot_P-littoralis_Contig750.8.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length68
Homology
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: D7G993_ECTSI (Matrin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G993_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 7.890e-40
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI+LIQDARDLYAKIKDSLDKEQWN EDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  142 MRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 208          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: D7FUU5_ECTSI (Matrin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 4.530e-37
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI+LIQDARDLYAKIKDSLDKEQWN EDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  474 MRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 540          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A6V1NE02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE02_HETAK)

HSP 1 Score: 105 bits (261), Expect = 2.040e-27
Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI  I+DA+ LYAK+K  LD + W+    EEYED EGNVLNRRTYEDLARQGL+
Sbjct:   78 MRCLGIPNTKHFHDITTIEDAKALYAKLKAGLDGDAWDGAVEEEYEDSEGNVLNRRTYEDLARQGLL 144          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A7S2V2Q3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.150e-27
Identity = 52/67 (77.61%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI LI+DA  L+ KIKD L  E WNA+  EEYED EGNVLNRRTYEDLARQGL+
Sbjct:  248 MRCLGIPNTKHFHDITLIEDATALFDKIKDQLAGEMWNADMEEEYEDSEGNVLNRRTYEDLARQGLL 314          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A836CE40_9STRA (Matrin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA)

HSP 1 Score: 107 bits (268), Expect = 8.160e-26
Identity = 50/67 (74.63%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI LIQDA DLYAK+K  L+ E W  +  EE+ED EGNVLN+RTYEDLARQGL+
Sbjct:  476 MRCLGIPNTKHFHDITLIQDAMDLYAKLKGKLEVEAWTPDVGEEFEDSEGNVLNKRTYEDLARQGLL 542          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A1W0ABW6_9STRA (Splicing factor 3A n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABW6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.290e-25
Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI  + DA  LY K+K+ L++E WN  + EE+ED EGNVLN++TY+DL RQGL+
Sbjct:    1 MRCLGIPNTKHFHDITSMSDALALYEKLKEQLERETWNKANEEEFEDSEGNVLNKKTYQDLERQGLL 67          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A2D4BU83_PYTIN (C2H2-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU83_PYTIN)

HSP 1 Score: 107 bits (266), Expect = 1.970e-25
Identity = 49/67 (73.13%), Postives = 57/67 (85.07%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLGIPNTKHFHDI  +QDA  LY K+KD +D+E WNAE  EE+ED EGNVL+R+TYEDLARQGL+
Sbjct: 2171 MRCLGIPNTKHFHDITGMQDAIALYEKLKDQIDQENWNAEKEEEFEDSEGNVLSRKTYEDLARQGLL 2237          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A812TNG2_SYMMI (SF3A3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI)

HSP 1 Score: 105 bits (262), Expect = 2.110e-25
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCLG+PNTKHFHDI LI+DA  LY+KI+DSL KEQ+  +  EE+ED EGNVLNRRTYEDLARQGL+
Sbjct:  332 MRCLGVPNTKHFHDITLIEDALALYSKIRDSLKKEQFVEDVEEEFEDSEGNVLNRRTYEDLARQGLL 398          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A329SA63_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329SA63_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.640e-25
Identity = 48/67 (71.64%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCL IPNTKHFHDI L++DA  LY K+KD +D E WNA + EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  450 MRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDAESWNASNEEEFEDSEGNVLNRKTYEDLARQGLL 516          
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Match: A0A2P4X7F8_9STRA (Splicing factor 3A n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4X7F8_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.650e-25
Identity = 48/67 (71.64%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEGNVLNRRTYEDLARQGLM 67
            MRCL IPNTKHFHDI L++DA  LY K+KD +D E WNA + EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  451 MRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDAESWNASNEEEFEDSEGNVLNRKTYEDLARQGLL 517          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig750.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G993_ECTSI7.890e-4097.01Matrin-type domain-containing protein n=1 Tax=Ecto... [more]
D7FUU5_ECTSI4.530e-3797.01Matrin-type domain-containing protein n=2 Tax=Ecto... [more]
A0A6V1NE02_HETAK2.040e-2773.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V2Q3_9STRA3.150e-2777.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CE40_9STRA8.160e-2674.63Matrin-type domain-containing protein n=1 Tax=Trib... [more]
A0A1W0ABW6_9STRA1.290e-2564.18Splicing factor 3A n=1 Tax=Thraustotheca clavata T... [more]
A0A2D4BU83_PYTIN1.970e-2573.13C2H2-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A812TNG2_SYMMI2.110e-2574.63SF3A3 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A329SA63_9STRA2.640e-2571.64C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
A0A2P4X7F8_9STRA2.650e-2571.64Splicing factor 3A n=2 Tax=Phytophthora TaxID=4783... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024598Splicing factor SF3a60 /Prp9 subunit, C-terminalPFAMPF11931SF3a60_Prp9_Ccoord: 1..67
e-value: 1.2E-18
score: 67.7
IPR031776Splicing factor 3A subunit 3PANTHERPTHR12786:SF2SPLICING FACTOR 3A SUBUNIT 3coord: 1..66
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 1..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig750contigP-littoralis_Contig750:35416..36094 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig750.8.1mRNA_P-littoralis_Contig750.8.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig750 34529..48870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig750.8.1 ID=prot_P-littoralis_Contig750.8.1|Name=mRNA_P-littoralis_Contig750.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=68bp
MRCLGIPNTKHFHDIILIQDARDLYAKIKDSLDKEQWNAEDNEEYEDGEG
NVLNRRTYEDLARQGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024598SF3a60/Prp9_C
IPR031776SF3A3