prot_P-littoralis_Contig750.25.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig750.25.3
Unique Nameprot_P-littoralis_Contig750.25.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length667
Homology
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A6H5JTK0_9PHAE (Replication protein A subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK0_9PHAE)

HSP 1 Score: 913 bits (2359), Expect = 0.000e+0
Identity = 475/681 (69.75%), Postives = 550/681 (80.76%), Query Frame = 0
Query:    1 MANLMSQGAIVTIMGGATGANGYNPVVQVISLKKMTSGGSDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEVSSGPTQKIGDPINIAEDSSAG-NPPMQQQPQQSNTGPYGGGAKPNAGQYGGG-DVKPKVSNNPYGP--KQTSNPYAGGGYGNNRSGGSNNSYGXXXX----------GATNNPYANRSGSGGGSNSGPVQRQSQDSMYVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDFAVINTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGN-DEMAKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEGCNKKVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKYN 666
            MANL+S+GAI  IMGGATGA GYNP VQV+SLKKMT+ G+DRWRLVLSDG+H+AQSMLATQQNEMIS+GDL+E+CII L+DYIVNVVQNKRLIILLKL+V+SGP  KIGDPIN +EDSSA   P +      +NTG YG  +KP         DVKPKV+NNPYG   KQ     AGGG         NN+Y XXXX          GA NNPYANR    G SNSGPVQRQSQDS Y+PISA+NPYQNRWTIKAR+T+KGDMR W+NA+G G LF +DLLDE GSEIKGTFFK+DADKWF +LQEGQVY+F+GG++KVANK++SS N+EYE+ FDSS QIN INDDSRISS TY+FVKLNEME ME NK+LD IAVVKS ED A   ++AGK+L+KRNL LVDDTCTEI LTLWG+ AKA+G RWEGNPV+AFKG+KLS+YNGRSL SLNSS+LVNDPDVPE A+L+ WF AAGGGSSFKSV++        DE+AKKD+S+RYTL SI + NLG+GEK DWAVVK TISFIKLD ++ PWYTACP EGCNKKV+ETMEG W CEKCNQTH EC RR++LNM ISD TGK WVTAFNDQAV LLDN+TADEL +MK+ G D E EE+F+EACFKTY+ TLR+K DM NDE R + T+QRM P+D+K EC A+LDAI+KYN
Sbjct:    1 MANLISRGAINQIMGGATGAAGYNPTVQVVSLKKMTNAGTDRWRLVLSDGQHFAQSMLATQQNEMISSGDLKELCIITLSDYIVNVVQNKRLIILLKLDVTSGPAPKIGDPINFSEDSSARVKPELGGGSNNNNTGHYGXXSKPXXXXXXXXRDVKPKVANNPYGASNKQXXXXXAGGG---------NNNYXXXXXXXXXXXXARGGAANNPYANR----GSSNSGPVQRQSQDSAYMPISAINPYQNRWTIKARITKKGDMRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELNFDSSTQINPINDDSRISSATYAFVKLNEMEAMEANKVLDVIAVVKSVEDHAQFVSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKLSEYNGRSLNSLNSSTLVNDPDVPETADLRAWFDAAGGGSSFKSVTVXXXXXXXXDEVAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLNMQISDNTGKAWVTAFNDQAVELLDNRTADELFQMKEEGNDAELEELFSEACFKTYMFTLRVKTDMYNDETRSRKTLQRMAPVDVKAECAALLDAIAKYN 668          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: D7FUU1_ECTSI (Replication protein A subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUU1_ECTSI)

HSP 1 Score: 623 bits (1606), Expect = 6.820e-218
Identity = 294/419 (70.17%), Postives = 350/419 (83.53%), Query Frame = 0
Query:  249 MRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDFAVINTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEM-AKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEGCNKKVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKYN 666
            MR W+NA+G G LF +DLLDE GSEIKGTFFK+DADKWF +LQEGQVY+F+GG++KVANK++SS N+EYE+TFDSS QIN INDDSRI S TY+FVKLNEME +E NK+LD IAVVKS ED A   ++AGK+L+KRNL LVDDTCTEI LTLWG+ AKA+G RWEGNPV+AFKG+KLSD++GRSL SLN+S+LVNDPDVPE A+L+ WF AAGGGSSFKSV+            AKKD+S+RYTL SI + NLG+GEK DWAVVK TISFIKLD ++ PWYTACP EGCNKKV+ETMEG W CEKCNQTH EC RR++L+M ISD TGK WVTAFNDQ V LLDN+TADEL +MK+ G D E EE+F+EACFKTY++TLR+K DM NDE R + T+QR+ P+D+K EC A+LDAI+KYN
Sbjct:    1 MRQWNNARGSGTLFSVDLLDEDGSEIKGTFFKQDADKWFQILQEGQVYAFTGGKVKVANKKFSSFNAEYELTFDSSTQINPINDDSRIGSATYAFVKLNEMEALEANKVLDVIAVVKSVEDHAQFVSRAGKQLDKRNLILVDDTCTEINLTLWGDMAKADGSRWEGNPVVAFKGVKLSDFSGRSLNSLNASTLVNDPDVPETADLRAWFDAAGGGSSFKSVTXXXXXXXXXXXXAKKDISQRYTLQSITDGNLGNGEKPDWAVVKATISFIKLDGERLPWYTACPKEGCNKKVTETMEGAWQCEKCNQTHPECQRRYMLSMQISDNTGKAWVTAFNDQGVELLDNRTADELFQMKEEGNDAELEELFSEACFKTYMLTLRVKTDMYNDETRSRKTLQRLAPVDVKAECAALLDAIAKYN 419          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A7S3XQ94_HETAK (Replication protein A subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ94_HETAK)

HSP 1 Score: 484 bits (1247), Expect = 2.360e-160
Identity = 287/669 (42.90%), Postives = 418/669 (62.48%), Query Frame = 0
Query:    1 MANLMSQGAIVTIMGGATGANGYNPVVQVISLKKMTSGGSDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEVSSGPTQKIGDPINIAEDSSAGNPPMQQQPQQSNTGPYGGGAKPNAGQYGGGDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGXXXXGATNNPYANRSGSGGGSNSGPVQRQSQDSMYVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNK-ILDTIAVVKSFEDFAVINTK--AGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREA-NLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEGCNKKVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKY 665
            MANL S G+I  I+ G     G  P +QVI++KK+   G+DR+RL++SDG++YAQ MLATQ N ++S+ +LQE+CI+KLT+Y+VN VQ +R++I L +EV SGP  K+GDP N    SS G  P    P Q                Y  G               +SNPY GG         S+NS  XX    TN        +   +++GPV R++ ++ Y PI++LNPYQNRWTIKARVT++ D+R WSNA+GEG L  +DLLD +G+EI+ T FKED D+ ++ LQEG+V+SFSGGR+KVANK+Y+S+ ++YEITF S   +    D++ I    +SFV   ++  + P+  ++D IAVVKS  + + I +K   GKEL+KR+LTLVD +  E+ LT+WGE+A A   +WE +PV+AFKGL+ SDY G SL SLNS+ ++ +PD+PE   L  W+   GG +        +G GG+  + K  +  R  L  I++   +G GEK D+A VK  +S+++ D    PWYT+CP++ C KK++E  +  W CEKCN+ +  C  R++L+    + +G+ WV+AFND+A  +L NKTADELQ+++  G D  YE  FA A F+ ++  LRIK +  ND+ R+K ++ R+ P+D   E   +L+AI  +
Sbjct:    1 MANLTS-GSIQQIVNGEV--TGLTPTLQVINVKKVQGAGADRFRLIISDGQYYAQCMLATQLNHLVSSNELQELCIVKLTNYVVNNVQGRRIVIGLAVEVVSGPVPKVGDPQN----SSGG--PAPAMPAQXXXXXXXXXXXXXXXPYQQGSXXXXXXXXXXXXXXSSNPYGGG---------SSNSXXXXGNTNTNTXXXXXXXT---TSTGPVARENPNAQYQPIASLNPYQNRWTIKARVTKRSDIRRWSNARGEGHLASVDLLDAEGTEIRATMFKEDCDRLYERLQEGKVFSFSGGRLKVANKQYTSIKNDYEITFGSETVVEGPLDEAGIEQNKFSFV---DIAALSPDAGMVDLIAVVKSAGELSTIISKKQGGKELQKRDLTLVDRSGAEVRLTVWGESALAQA-QWEHSPVVAFKGLRASDYGGVSLSSLNSTVVMINPDLPEGHALHAWWTQQGGATQQTRSLSAAGPGGSRWVTK--VQNRAQLGVIKDIPGIGAGEKPDYAEVKAMLSYMRHD--NGPWYTSCPNDDCKKKMTEGFDQKWSCEKCNKQYDRCKHRYVLSTRFIEASGQDWVSAFNDEAEMIL-NKTADELQQLQSEGNDVAYEAAFAAANFQHFVAQLRIKQETYNDQARLKLSLIRLKPVDPVEESRMLLEAIDCF 639          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A835Z8X4_9STRA (Replication protein A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X4_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 9.410e-153
Identity = 267/671 (39.79%), Postives = 384/671 (57.23%), Query Frame = 0
Query:    5 MSQGAIVTIMGGATGANGYNPVVQVISLKKMTS--GGSDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEVSSGPTQKIGDPINIAEDSSAGNPPMQQQP-------QQSNTGPYGG-GAKPNAGQYGGGDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGXXXXGATNNPYANRSGSGGGSNSGPVQRQSQDSMYVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDFAVINTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEGCNKKVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKY 665
            ++QGAI  I+  A+G +G+ P+VQV+S+KKMT+  G  +R+R+V+SDG+H+ QSML T QN++I++G + E C+I L ++I+N +  K ++I+L+  V SG   KIGDP                         + + T P     ++  + +                          GGYG+                           SGG S  GPVQR    + Y PIS LNPY NRWTIKARVT K ++R WSN +GEG L  +DLLDE G E++GTFFK+  DK+  +L+   VY+FSGGRIKVANK+YSSL ++YEITF+S   I ++ DD RI +M  +F ++ +++ +E N  +D +AVV+ F+D A+I TK  +E+EKRN+TLVDD+  E+  TLWG  AK   D   G+PV A                  SS++V  PD+ EA  L  W+    G                      D+++R  +  I+E  LG  EK D+A +K  ++FIK D++  PWYTACP+EGCNKKV E M+ GW CEKC++++  C RR+I ++ +SD TG+ W +AFND A P+L   +ADEL   K  G+D  +E+ F EAC+K Y++ +R+KA+MVNDE R+K T+    P+D   E  A++ AI  Y
Sbjct:    6 VTQGAIQRIIT-ASGQDGFLPIVQVLSIKKMTAAAGQGERYRVVVSDGQHHQQSMLTTSQNDLITSGQMVEGCLICLDEFILNQIGAKSIVIILRASVLSGAMPKIGDPTAFERADGXXXXXXXXXXXXXXXXTRATATAPLAALSSRWRSSRGRAXXXXXXXXXXXXXXXXXXXXXXXGGYGH---------------------------SGGAS--GPVQRHDSGASYTPISDLNPYMNRWTIKARVTAKSEIRRWSNQRGEGYLASVDLLDEFGGEVRGTFFKDAVDKYLPMLEVNSVYTFSGGRIKVANKQYSSLQNDYEITFNSDSVIEKVADDKRIKAMNLTFRRIADLKDVEVNATIDILAVVRDFQDMAMIMTKNNREVEKRNITLVDDSGAEVVCTLWGAHAKLPDDALRGSPVAAXXXXXXXXXXXXXXXXXXSSTVVLAPDLEEARALHNWWTRYAGXXXXXXXXXXXXXXXXPRSDPYDVAQRLGVAGIKEEQLGLKEKPDYASLKAYVAFIKHDSENGPWYTACPTEGCNKKVVEEMDQGWRCEKCSRSYPNCRRRYIASLAMSDHTGQTWFSAFNDVAQPMLAQHSADELFEWKTSGQDELFEDTFVEACWKQYVLRVRVKAEMVNDEQRIKSTIVDAEPVDPVKESAALIRAIKAY 646          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A6U0TYW6_9STRA (Replication protein A subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TYW6_9STRA)

HSP 1 Score: 462 bits (1190), Expect = 1.060e-151
Identity = 266/654 (40.67%), Postives = 393/654 (60.09%), Query Frame = 0
Query:   25 PVVQVISLKKMTS--GGSDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEVSSGPTQKIGDPINIAEDSSA---------GNPPMQQQPQQSNTGPYGGGAKPNAGQYGGGDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGXXXXGATNNPYANRSGSGGGSNSGPVQRQSQDSMYVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSF-EDFAVINTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDP-DVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEGCNKKVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKY 665
            PV+QVI ++K+++  G S+R+R+VLSDG++Y  +MLATQQN ++++G L+   +++L  Y+VN VQ KR++IL+  +V     + +G P ++   +SA         G PP + QPQQ                                    SN   GGG                   A    Y   S S  G NS PV R   D   +PI+ALN Y ++WTIKARVT K  +R WSNA+GEG LF +DLLD QG EI+ TFFK+  D++  +LQEG+VY+FSGGR+K+A K Y+S+ ++YEITFD +  I   +D+  I  + Y+F K+ ++E + P   +D +AVVKS  E  ++++ K  KEL KR+L LVDD+ TEI +TLWG+ A+ +G +W  NPVIA KG+K+SDYNGRSL  L SS+   D  D PEA  L+ W++A  G     S+S +SGGGG    A   +++R  L +I++  LG   ++++  VKGT++ ++ + + DPWYTA P EG   KV+ET EG W CE+  +T+  C RRF+L++ ++D +G  WVTAFND A  LL  KTADE   M+  G++  Y+E F++  FK  +  LR+K + +NDE RVK ++  +  ++ K EC  +++ I+K+
Sbjct:   20 PVLQVIHIRKISNANGPSERFRIVLSDGENYNTAMLATQQNGVVNSGALKVHSLVRLGYYMVNEVQGKRILILINFDVVGEAERILGKPQDLHSGASADKFDKNAAAGAPPARPQPQQX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXSNAMPGGG--------------EPARTAPKPEYGTYSSSMMG-NSAPVARVESDDRIMPIAALNLYNSKWTIKARVTSKSAIRRWSNARGEGHLFNVDLLDGQGGEIRATFFKDACDRFEPLLQEGRVYTFSGGRLKLAKKEYTSIKNDYEITFDRNADIRPSDDEGGIKRIKYNFTKIGDIEKVAPGATIDLVAVVKSCGECNSIMSQKLSKELFKRDLVLVDDSNTEIQMTLWGDRAREDGGQWMSNPVIAVKGVKVSDYNGRSLSLLQSSNFSTDTTDSPEAGRLRQWWSANQGNVQTTSISAKSGGGG---AAGTSVAQRQPLSTIKDEGLGTKGETEYLAVKGTVTLLQTNGNNDPWYTAAPEEGVLFKVTETTEGQWFCERNGKTYDTCKRRFVLSLVLTDYSGNTWVTAFNDPAELLLGGKTADECYEMRARGDEQGYKECFSKGQFKQCIFKLRVKTEQLNDEQRVKTSIVTIRDVNYKEECRQLIEEIAKF 647          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: W7T7F5_9STRA (Replication protein A subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7F5_9STRA)

HSP 1 Score: 449 bits (1155), Expect = 4.750e-146
Identity = 266/663 (40.12%), Postives = 386/663 (58.22%), Query Frame = 0
Query:   19 GANGYNPVVQVISLKKMTSG----GSDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEVSSGPT-QKIGDPINIAEDSSAGNPPMQ-------QQPQQSNTGPYGGGAKPNAGQYGGGDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGXXXXGATNNPYANRSGSGGG--SNSGPVQRQSQDSMYVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDFAVINTKA-GKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEGCNKKVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKYN 666
            G   ++PVVQV+  K++       G  R+RL++SDG HY Q+MLATQ N +I+ G + E  +I L ++I N VQ ++++I+L+  V S     ++GDP+   + ++ GN  MQ       QQPQQ+          P      G  V       PY P  +S            S GS+N+      GA   P  N  G+ GG  + SGPV R       +PI+ LNPY NRW IKARVT K D++ WSNAKGEG LF +DLLDE   EI+ TFFKE  +K++ +L++G VY+FSGG++K A ++YSS+ + YE TFD++ +I ++ DD +I S  YSF K+ E+E   PN  +D I VVK+F   + I TK  G+E+EKR LTL DDT TE+ LT+WGE A    ++WE +P++AFKG+K+SDYNGRSLG++  S +   PD+PEA  L  W+ +AG                         ++R  L  I+E  LG GEK D+  VK T+++IK  +D DPWY +C S  C +KV+E +   + CEKC +   EC  R+IL ++ +D +G  +++ F++ A  LL  ++A+EL   K       Y+  F EA F T+++ LR+KA+ VNDE RVK T+  + P+++  E   ++ AI  YN
Sbjct:   62 GQTKFSPVVQVMDFKQVQPNHGQPGQVRYRLIVSDGTHYQQAMLATQLNVLINEGQITEHGLICLEEFICNEVQGRKIVIILRCHVVSPSLGYRVGDPVEYGK-AAGGNGGMQGGQPVYGQQPQQA----------PALNTMAGASV-------PYKPAGSS------------SAGSSNA------GAY--PPYNSGGAAGGYRAPSGPVVRAGPPQSIIPINDLNPYINRWVIKARVTSKTDIKRWSNAKGEGTLFSVDLLDEFDGEIRATFFKEACEKFYPLLEQGHVYTFSGGKLKPAQRQYSSIRNNYETTFDTNSEIMEVMDDHKIQSAVYSFKKIGELEETPPNATIDVIGVVKAFSPLSTITTKKDGREVEKRELTLCDDTGTEVRLTVWGERASKQPEQWENHPIVAFKGVKVSDYNGRSLGTMPGSQVTVSPDLPEALHLHNWWHSAGATXXXXXXXXXX----XXXXXXXXFADRKVLSQIKEEQLGFGEKPDYMDVKATLTYIK--SDPDPWYRSCTSPDCKRKVTEQLNS-YFCEKCQREMPECAYRYILTVSGTDHSGSVYLSCFDEHANILL-GRSAEELNSFKASDMQARYDATFQEATFGTHILRLRVKAEQVNDEQRVKSTIMNIRPVNLVQEIRDLITAIKAYN 678          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A7S2ULH8_9STRA (Replication protein A subunit n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULH8_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 2.210e-137
Identity = 259/688 (37.65%), Postives = 400/688 (58.14%), Query Frame = 0
Query:    5 MSQGAIVTIMGGATGANGYNPVVQVISLKKMTSGG-SDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEV-SSGPTQKIGDPINIAEDSSAGNPPMQQQPQQSNTGPYGGGAKPNAGQYGGGDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGXXXXGATNNPYANRSGSGGGSNSG---------------PVQRQSQDSM---YVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDF-AVINTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANLGHG-EKSDWAVVKGTISFIKLDADKDPWYTACPSEG--CNK--KVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGE-YEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKY 665
            ++ GA+ T+         Y PV+QVI +K +  GG S+R+R + SDG+++ Q MLATQ N ++ +G++QE  +I + +++ NVVQ + +II+LKLEV ++ P Q+ GDP +I +++           QQS+     GGA P A        +P   N P   + T+   +GG Y  N+S    N+YG              +GS GGS+                 P+ R S  +    Y PIS LN YQNRWTIK RVT K  +RTWSNAKG+G LF ID+LD   ++++ TFFKE  DK+F+ L+  +VY+F+GGR+K AN +Y++  S +EITFD + +I+  ND   I   T+ FV++ ++E +EP K +D +AVVKS  +  ++++ K+G+EL+K  L LVDD+  E+TLT+WGE A      +  +P++ FK  ++SD+ GRSL   +++S V +P +PE   ++ W+ + G  S+  + S+ S GG    +   D  ER T+ SI+  ++G   +K DW   KGT +FIK D D   WY AC + G  C    KV++T +G W C+KC  T+  C RRFI + TI+D T   WV+ FN+QA  LL   TAD++ +      D + Y+  F++A F  ++   +++ + +NDE RVK  +Q + P+D   E   +L AI+++
Sbjct:    3 LTHGAVRTLATADQADPSYQPVLQVIHVKAVGGGGASERFRAIFSDGQNFVQGMLATQLNPLVHSGEIQENSVIAVKEFMKNVVQGRTVIIVLKLEVITANPGQRFGDPKDIEKENI----------QQSS-----GGAAPAA--------QPMYGNRPTPVESTT---SGGMY--NQSTQPTNTYG--------------AGSKGGSSGAXXXXXXXXXXXXXXAPIVRSSNPASGDNYTPISQLNIYQNRWTIKGRVTSKSAIRTWSNAKGDGSLFSIDILDASATDVRATFFKEAVDKFFNTLEVDKVYTFTGGRLKTANIQYNTCKSGFEITFDQNAEIHLDNDTGEIQQQTFEFVQIAQLEQVEPGKYVDILAVVKSVGEVGSIVSKKSGQELKKCELVLVDDSAVEVTLTVWGEEATKAQALYGNSPIVGFKRSRVSDFGGRSL---SANSAVVNPRLPETERVRAWWQSVGSNSANPTRSLSSAGGKGGRLPAFD--ERKTVSSIKNEHMGQNTDKPDWVSFKGTFNFIKKDKDGGAWYPACANAGEPCKNRFKVTQTADGNWYCDKCQGTYPNCVRRFIFSATITDDTSTTWVSIFNEQAEVLLGGVTADDVYKNTHENHDQDAYDAFFSKATFTDWVFNCKVRQEFMNDEARVKTQIQSLHPMDYVQESRNLLQAIAQF 643          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A7S0GBI1_9STRA (Replication protein A subunit n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GBI1_9STRA)

HSP 1 Score: 422 bits (1085), Expect = 2.300e-136
Identity = 253/669 (37.82%), Postives = 373/669 (55.75%), Query Frame = 0
Query:   32 LKKMTSGGSDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEV-SSGPTQKIGDPINIAEDSSAGNPPMQQQPQQSNTGPYGGGAKPNAGQYGGGDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGXXXXGATNNPYA-NRSGSGGGSNSGPVQRQ---------------------SQDSMYVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDFA-VINTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSS-FKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEG--CNK--KVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLL-DNKTADELQRM----KDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKYN 666
            +K++  G  +RWR+V+SDG+H+ Q MLATQ N  I++ ++QE  IIK+ D + N++ N+ ++I+L LEV +S P  KIG+P+++                   T P  GGA            KP   NN   P   S P A                        +NPY  +RS S                                 S+D+ + PIS LN YQNRWT+KARVT K D+RTWSNA+GEG LF  D+LD  G++I+ TFFKE  DK+  +LQ   VY+F+ GR+KVAN +Y++  S +E++FD + +++++ DD RI    Y F+ ++ +E  EPN  +D + VVK       V++ K G+EL K +LT+VD +  EI LT+WGE AK     +   P++AFK L++SDY GRSL S  +     +P +PE   LQ W+   G  SS  KS+S R GGG  D  A     +R TL +I+  N+G+GEK DW  VK T SF+K D +  PWYTAC +E   C +  KV++T +G W C++CN+T  +C RR+I + TI+D+T   WV+ F++QA+  L +  TAD +          G+   ++ +FA+A    +++  ++K +MV DE RVK T+  +TP+D   E   +L+AISK +
Sbjct:    1 VKRVGGGSQERWRVVISDGEHFIQGMLATQINHFITSNEIQENSIIKINDNMTNLINNRIIVIVLNLEVLNSTPGLKIGNPVDVG------------------TAPSVGGASVVTA------AKPLYGNNVSNPAAQSKPEA----------------------VNSNPYGQSRSPSXXXXXXXXXXXXXXXXXXXXXXXXXIVRSNMSLSEDN-HTPISQLNMYQNRWTVKARVTSKSDIRTWSNARGEGSLFSCDILDSSGTDIRCTFFKEAVDKFHPMLQMDHVYTFTNGRLKVANAQYNTCKSNFEVSFDQNAEVHEVADDGRILQQQYEFLPISAVEQTEPNSNIDLLVVVKEVHPIGTVMSKKTGQELFKCDLTVVDQSNVEINLTVWGEKAKTAEANFANQPIVAFKRLRVSDYGGRSLSSSGNGGETVNPRIPEVQPLQHWWNTQGRTSSTLKSLSTRGGGGRMDSFA-----DRKTLSAIKTDNMGYGEKPDWMSVKATFSFVKKDKEGGPWYTACVNEEEPCRQRVKVTQTTDGYWHCDRCNKTSEKCKRRYIFSATIADETSTSWVSLFDEQALQFLGEEHTADSVYDRYFSDSSNGDTEGFDGLFAKATSTDWIVKCKVKNEMVGDESRVKTTIYSLTPMDYVKESRDLLEAISKLS 617          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A7S2V6G1_9STRA (Replication protein A subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6G1_9STRA)

HSP 1 Score: 416 bits (1068), Expect = 3.080e-136
Identity = 207/447 (46.31%), Postives = 304/447 (68.01%), Query Frame = 0
Query:  224 YVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDFAVI--NTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNP-VIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLDADKDPWYTACPS-EGCNKKVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAISKYN 666
            Y PIS+LNPYQNRW IKARVT K  ++TWSN +GEG+L  I+LLD+QG+EI+GTFFK+  D W++ +++G+VYS SGGRIK+ANK+YS++ ++YEITFD+S  I Q++DDS I  +  S VK+ E+  + P   +D +AVVK+  + A I    + G++L+KR+L LVDD+  E+ LT+W E AK +G  W GNP ++  K +++SD+ G +L +  SS L  +PD+PEA  L +W+ +  GGS  +S S+ +GGGG  +  K D   R T+ +I++  LG  EK DW  +K T+ FIK D  K+PWY AC S   C KK SE + G W C+ C++T      R+I++  + D TG+ W +AFN+ A  +L  +TA+EL++M + G+D  YE+ F+EA FK Y++T R+K++ VNDE RVK T+ R+TP+D   E   +L  I+KY+
Sbjct:    3 YQPISSLNPYQNRWVIKARVTNKTPIKTWSNVRGEGKLASIELLDDQGTEIRGTFFKQQVDDWYNRIEQGKVYSISGGRIKIANKQYSNVKNDYEITFDNSTDIQQLDDDSSIEGLKLSIVKIQELSSLAPGANVDILAVVKNVGEMAEIVSQKQGGRQLQKRDLILVDDSGAEVKLTVWNEMAK-DGSMWVGNPTLVGAKNVRVSDFGGVTLSANQSSGLNINPDIPEAHSLHSWWMS--GGSEAQSTSLSTGGGGGRD--KPDQ--RKTIAAIKDEQLGFKEKPDWLSLKATVCFIKHD--KEPWYPACNSGNDCKKKASEDLTGVWRCDTCDKTFERPIYRYIMSTKLVDHTGQNWFSAFNETAETMLGGQTANELKQMLESGQDNNYEDAFSEANFKPYIVTCRVKSEQVNDETRVKSTLVRLTPVDFVEESKNLLGMIAKYD 440          
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Match: A0A7S2VFV8_9STRA (Replication protein A subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFV8_9STRA)

HSP 1 Score: 420 bits (1080), Expect = 1.790e-135
Identity = 254/671 (37.85%), Postives = 393/671 (58.57%), Query Frame = 0
Query:    5 MSQGAIVTI--MGGATGANGYNPVVQVISLKKM--TSGGSDRWRLVLSDGKHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQN-KRLIILLKLEVSSGPTQKIGDPINIAEDSSAGNPPMQQQPQQSNTGPYGGGAKPNAGQYGGGDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGXXXXGATNNPYANRSGSGGGSNSGPVQRQSQDSM-YVPISALNPYQNRWTIKARVTRKGDMRTWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSGGRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEMEGMEPNKILDTIAVVKSFEDFAVI-NTKAGKELEKRNLTLVDDTCTEITLTLWGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEAAELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANLGHGEKSDWAVVKGTISFIKLD--ADKDPWYTACPSEG--CNK--KVSETMEGGWMCEKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQRMKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPIDIKTECNAMLDAI 662
            ++ GAI  +  M G++    + P VQ++ LKK+    G  DRW++VLSDG  +   M ATQ N  +++G++ +  II + +++VN + + ++++I+L+ E+   P  ++G+P++I +  + G+   Q QP    +G  GGGA+P  G+                 +   NPY GGG              XXXX   N+     SG G   +S PV R +  S  + PIS LN Y NRW I+A++T K ++RTWSNAKGEG LF + +LD  G+++K TFFKE  DK++++L+EG+VY+FSGGR+KVAN +Y++  S++EITFD + +I+ + DD+     +Y FVK+  +  MEP+  +D +AVVK   D AVI + K+GKE+ K  LT+ DD+  ++ LT+WG+ A     ++  +P++AFK  ++SDY GRSL     S  VN P +P+A +L+ W+A  G  +  +S+S   GG            +R T+ SI+E  LG+ EK DW   K TI+FIK D   D+  WYTAC + G  C    K ++T +G + C+KC QTH +C RRFI + T++D T   WV+ FN+QA  + +   ADEL      G+   Y+  FA+A    +++  ++K + V DE RVK ++  +TPID   E   +L A+
Sbjct:    3 LTDGAIQRMFSMSGSSDDPSFLPSVQILHLKKIPQNGGADDRWKVVLSDGNRFLSGMCATQLNIKVNSGEIAQFGIINVNEFLVNTLPSGQKIVIVLRCELVQNPGSRLGNPVDITKAGNVGS--AQAQP----SGGVGGGAQPMYGKV----------------ESAGNPYGGGGS-------------XXXXXXXNSGGMGMSGQG---SSNPVIRTNASSQSFTPISGLNMYSNRWVIRAKITNKSEIRTWSNAKGEGSLFSVVVLDSSGTDVKCTFFKEAVDKFYNLLEEGRVYTFSGGRLKVANMQYNTCKSQFEITFDQNSEIH-LQDDAEDIQESYDFVKIAALSEMEPSGFVDILAVVKHVADPAVIVSKKSGKEMTKCELTIQDDSGADVRLTVWGDLAANAQTKFANSPIVAFKRARISDYGGRSLSGSGCS--VN-PTIPQANQLRQWWADNGSNTQARSLSSAGGGA----RGADPFEQRKTVSSIKEEQLGYNEKPDWLSFKATITFIKKDKAGDEGAWYTACFNSGDPCKNMFKATQTSDGFFHCDKCQQTHEKCVRRFIFSGTVADDTSTSWVSVFNEQAESMFNGVKADELYEKIAEGDRDSYDSTFAKASCTEWIIKCKVKQEHVGDESRVKTSIVSLTPIDYAAESRNLLAAL 627          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig750.25.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTK0_9PHAE0.000e+069.75Replication protein A subunit n=1 Tax=Ectocarpus s... [more]
D7FUU1_ECTSI6.820e-21870.17Replication protein A subunit n=1 Tax=Ectocarpus s... [more]
A0A7S3XQ94_HETAK2.360e-16042.90Replication protein A subunit n=1 Tax=Heterosigma ... [more]
A0A835Z8X4_9STRA9.410e-15339.79Replication protein A subunit n=1 Tax=Tribonema mi... [more]
A0A6U0TYW6_9STRA1.060e-15140.67Replication protein A subunit n=1 Tax=Pinguiococcu... [more]
W7T7F5_9STRA4.750e-14640.12Replication protein A subunit n=1 Tax=Nannochlorop... [more]
A0A7S2ULH8_9STRA2.210e-13737.65Replication protein A subunit n=1 Tax=Attheya sept... [more]
A0A7S0GBI1_9STRA2.300e-13637.82Replication protein A subunit n=1 Tax=Proboscia in... [more]
A0A7S2V6G1_9STRA3.080e-13646.31Replication protein A subunit n=1 Tax=Fibrocapsa j... [more]
A0A7S2VFV8_9STRA1.790e-13537.85Replication protein A subunit n=1 Tax=Skeletonema ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007199Replication factor-A protein 1, N-terminalPFAMPF04057Rep-A_Ncoord: 5..100
e-value: 2.4E-26
score: 91.7
IPR007199Replication factor-A protein 1, N-terminalCDDcd04477RPA1Ncoord: 8..100
e-value: 1.01625E-34
score: 125.002
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 4..116
e-value: 3.3E-32
score: 112.9
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 472..666
e-value: 2.0E-58
score: 198.8
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 335..470
e-value: 1.2E-32
score: 114.5
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 223..333
e-value: 2.1E-38
score: 132.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 488..665
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..104
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 341..459
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 224..334
IPR004591Replication factor A protein 1TIGRFAMTIGR00617TIGR00617coord: 214..664
e-value: 4.6E-147
score: 489.1
IPR004591Replication factor A protein 1PANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 7..661
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 237..321
e-value: 4.6E-9
score: 36.2
IPR013955Replication factor A, C-terminalPFAMPF08646Rep_fac-A_Ccoord: 508..657
e-value: 2.6E-42
score: 144.0
IPR013955Replication factor A, C-terminalCDDcd04476RPA1_DBD_Ccoord: 495..664
e-value: 5.61536E-56
score: 185.975
IPR031657Replication protein A, OB domainPFAMPF16900REPA_OB_2coord: 346..443
e-value: 6.5E-27
score: 93.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..227
NoneNo IPR availablePANTHERPTHR23273:SF47REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Acoord: 7..661
NoneNo IPR availableCDDcd04474RPA1_DBD_Acoord: 226..324
e-value: 2.36202E-50
score: 168.194
NoneNo IPR availableCDDcd04475RPA1_DBD_Bcoord: 357..457
e-value: 5.25973E-26
score: 100.351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig750contigP-littoralis_Contig750:63443..86832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig750.25.3mRNA_P-littoralis_Contig750.25.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig750 63377..87895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig750.25.3 ID=prot_P-littoralis_Contig750.25.3|Name=mRNA_P-littoralis_Contig750.25.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=667bp
MANLMSQGAIVTIMGGATGANGYNPVVQVISLKKMTSGGSDRWRLVLSDG
KHYAQSMLATQQNEMISNGDLQEMCIIKLTDYIVNVVQNKRLIILLKLEV
SSGPTQKIGDPINIAEDSSAGNPPMQQQPQQSNTGPYGGGAKPNAGQYGG
GDVKPKVSNNPYGPKQTSNPYAGGGYGNNRSGGSNNSYGRGGGGATNNPY
ANRSGSGGGSNSGPVQRQSQDSMYVPISALNPYQNRWTIKARVTRKGDMR
TWSNAKGEGRLFGIDLLDEQGSEIKGTFFKEDADKWFDVLQEGQVYSFSG
GRIKVANKRYSSLNSEYEITFDSSCQINQINDDSRISSMTYSFVKLNEME
GMEPNKILDTIAVVKSFEDFAVINTKAGKELEKRNLTLVDDTCTEITLTL
WGEAAKANGDRWEGNPVIAFKGLKLSDYNGRSLGSLNSSSLVNDPDVPEA
AELQTWFAAAGGGSSFKSVSIRSGGGGNDEMAKKDMSERYTLDSIREANL
GHGEKSDWAVVKGTISFIKLDADKDPWYTACPSEGCNKKVSETMEGGWMC
EKCNQTHAECTRRFILNMTISDQTGKQWVTAFNDQAVPLLDNKTADELQR
MKDGGEDGEYEEVFAEACFKTYLMTLRIKADMVNDEMRVKYTVQRMTPID
IKTECNAMLDAISKYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007199Rep_factor-A_N
IPR012340NA-bd_OB-fold
IPR004591Rfa1
IPR004365NA-bd_OB_tRNA
IPR013955Rep_factor-A_C
IPR031657REPA_OB_2