prot_P-littoralis_Contig75.61.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig75.61.1
Unique Nameprot_P-littoralis_Contig75.61.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length100
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig75.61.1 vs. uniprot
Match: A0A6H5L6M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M2_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.670e-12
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:   39 DELAPLDEDD--DSVDPDDEIQGVEIPEIPDGFAFKRQSPLVLTVRYCSVECSSGWPWGGLVG 99
            DELA LD+DD  D  DP+DEIQG+EIP    GF FK+ +PL+LT  +C VE S  W WGGL G
Sbjct:   16 DELALLDDDDSMDPQDPEDEIQGMEIPA---GFVFKKLNPLLLTDCFCGVERSLDWAWGGLEG 75
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6M2_9PHAE6.670e-1258.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:213089..213568 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.61.1mRNA_P-littoralis_Contig75.61.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig75 212879..214078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig75.61.1 ID=prot_P-littoralis_Contig75.61.1|Name=mRNA_P-littoralis_Contig75.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MCAGDGTTGPWGEGDGVGSRGDDDSSIEGDNDTPDNLGDELAPLDEDDDS
VDPDDEIQGVEIPEIPDGFAFKRQSPLVLTVRYCSVECSSGWPWGGLVG*
back to top