prot_P-littoralis_Contig75.56.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig75.56.1
Unique Nameprot_P-littoralis_Contig75.56.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length253
Homology
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: A0A6H5JC42_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC42_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 1.010e-108
Identity = 175/248 (70.56%), Postives = 194/248 (78.23%), Query Frame = 0
Query:    7 AGGPDLALSNAEEGAGSPDTXXXXXXXXXXXXXXXXXXRPHSRRRA--LRAFSLMDLRSRRFVGFLAIFSVYSLVQTGALNWVLVAWGFCGTLLCMSCVWLARVVHVYARRSNAARRRQQRIPLGALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEPAPDSVVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 252
            A G + +LSNAEEG  +  +                     SRR A  LRA SL+ LRSRRFVG L +  V+SLVQ G LNW L+AWGF G+LL +S   L R+V+ YA RS+ ARRR+QRIP GALEARLQL HPGIELGRLRLLLVDRDFTGEDYQALLDLD+ N+VPSTVGASEGEI+RNPSF+I EPA DSVVKPK+CSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG
Sbjct:    5 ADGGNASLSNAEEGGAATISPRDTA----------------SRRSAGPLRA-SLIPLRSRRFVGLLLMICVFSLVQVGVLNWTLMAWGFFGSLLVVSLFRLVRLVNGYAIRSDTARRRRQRIPRGALEARLQLHHPGIELGRLRLLLVDRDFTGEDYQALLDLDENNDVPSTVGASEGEIKRNPSFVIPEPAADSVVKPKNCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 235          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: A0A836CGW1_9STRA (Ubiquitin-protein ligase/ zinc ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW1_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.920e-41
Identity = 73/122 (59.84%), Postives = 90/122 (73.77%), Query Frame = 0
Query:  132 EARLQLRHPGIELG-RLRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEPAPDSVVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 252
            E+R+  RHP +  G RL LLL+DRDF G+DYQ LL+LD  N  P+ VGA+E EIRRNP F ++E   D+    +SCSICL+ F   E VRI+PCLHQ+H+ECID WLR NA CP+CKFPAVG
Sbjct:  124 ESRMLARHPQLANGGRLALLLMDRDFDGDDYQMLLELDADNVAPAAVGATEAEIRRNPCFTVQES--DAKQLARSCSICLHTFCAGEEVRIVPCLHQYHSECIDEWLRMNATCPICKFPAVG 243          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: W7T4H0_9STRA (Zinc finger, RING-type n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4H0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.120e-24
Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 0
Query:  130 ALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLD-DTNEVPSTVGASEGEIRRNPSFLIKEPAPDSVVKPKSCSICLYPFKPRERVRIIPCLHQFH-TECIDPWLRQNAICPVCKF 248
            A+E  + L   G +  RL+L+L+DRDF+ EDY+ L  LD D  +    +GA++ E+ R P++++     D+  K   C ICL  F   E VRI+PCLHQFH +EC DPWLR+   CPVCKF
Sbjct:   85 AVEEGIALSRRGTDSSRLQLMLMDRDFSSEDYEVLSRLDEDEQDACHLLGATDAELERLPTYIV-----DTETKLNKCFICLNDFLKGEVVRILPCLHQFHQSECCDPWLRRKMECPVCKF 200          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: L1IY96_GUITC (RING-type domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IY96_GUITC)

HSP 1 Score: 98.6 bits (244), Expect = 1.890e-22
Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 0
Query:  142 IELGRLRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEPAPDSVVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCK 247
            I    LRL L++RDFT  DY+ALL LD+      + GA++  I R P + + E +     K   C++CL P    ++ RI+PCLHQFH +CID WLR N+ CPVCK
Sbjct:   22 ISQDHLRLSLINRDFTSNDYEALLSLDEA--AGRSRGANQDRIDRLPCYTVAEGS-----KAPPCTVCLDPLNVSDQARILPCLHQFHKDCIDRWLRDNSTCPVCK 120          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: A0A6G0WUI5_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUI5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.280e-22
Identity = 50/108 (46.30%), Postives = 65/108 (60.19%), Query Frame = 0
Query:  147 LRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEP--APDSVVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 252
            + LLL DRDF   DY+ LL LD+ N V  + GA++ EI R P   I E   +   V +   CSICL       + R++PC H+FH  CIDPWL+  A CP+CKFPA+G
Sbjct:   92 INLLLTDRDFDSNDYERLLLLDENN-VKKSHGATDFEIDRLPVVTISESMLSKGGVEEDLKCSICLEELSVGSQARMVPCFHRFHPACIDPWLKDKAECPICKFPAIG 198          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: A0A485LC69_9STRA (Aste57867_17819 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC69_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.340e-22
Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 0
Query:  147 LRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEPAPDS-----VVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 252
            + LLL DRDF   DY+ LL LD+ N V  + GA++ EI R P   + E    S     V +   CSICL       + R++PC H+FH +CIDPWL+  A CP+CKFPA+G
Sbjct:  102 INLLLTDRDFDSNDYEQLLMLDENN-VKKSHGATDVEIDRLPVVTVSESMLQSTNKGGVPEDLKCSICLEDLVVGSQARMVPCFHRFHPQCIDPWLKDKAECPICKFPAIG 211          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: A0A397AU11_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AU11_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.870e-22
Identity = 49/110 (44.55%), Postives = 65/110 (59.09%), Query Frame = 0
Query:  147 LRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEP----APDSVVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 252
            + LLL DRDF   DY+ LL LD+ N V  + GA++ EI R P   + E     +   VV+   CSICL       + R++PC H+FH  CIDPWL+  A CP+CK+PAV 
Sbjct:   63 INLLLTDRDFDSNDYERLLLLDENN-VKKSHGATDFEINRLPVVTMSESMLNASKGGVVEDSKCSICLEELVVGTKARMVPCFHRFHPGCIDPWLKDKAECPICKYPAVA 171          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: H3GXJ4_PHYRM (RING-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXJ4_PHYRM)

HSP 1 Score: 98.2 bits (243), Expect = 1.390e-21
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 0
Query:  123 QQRIPLGALEARLQLRHPGIELGRLRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEPAPDSVVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 252
            QQR P G ++    L +  ++   L+LL+ +RDF   DY+ L+ L+  NE     GAS  +I++ P   + E    +     SC++CL  F+   RVR++PC H+FH ECIDPWL++ A CPVCKFPA+ 
Sbjct:   63 QQRRPRGVMQMSRAL-YDQLDGEMLQLLMSNRDFDSNDYERLMRLEALNERKRE-GASPHQIQQLPIVTVTESMLQASEN-ASCAVCLSTFQLDGRVRMMPCFHRFHQECIDPWLQEKASCPVCKFPAIA 189          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: A0A7S2EWT1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EWT1_TRICV)

HSP 1 Score: 98.6 bits (244), Expect = 1.870e-21
Identity = 55/127 (43.31%), Postives = 68/127 (53.54%), Query Frame = 0
Query:  147 LRLLLVDRDFTGEDYQALLDLDDTN-----EVPSTVGASEGEIRRNPSFLIKEPAPDSVVK-----------------PKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAV 251
            L L+L  RDFTG+DY+ LL  +D +        +TVGA+E EI R P  +I     D +                   P+SC ICL  ++  E VR +PCLH FH  CIDPWLRQ A CPVCK  AV
Sbjct:   89 LGLVLSGRDFTGDDYERLLRFNDESGPALESAAATVGATEAEITRCPRRIISSAGDDLISGRTRSAGEAAAASGGTRGPRSCPICLEQYQISEEVRTLPCLHTFHCNCIDPWLRQKAECPVCKQSAV 215          
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Match: A0A3F2RQ68_9STRA (RING-type domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQ68_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.050e-21
Identity = 47/106 (44.34%), Postives = 68/106 (64.15%), Query Frame = 0
Query:  147 LRLLLVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEPAPDSVVKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPAVG 252
            L++LL +RDF   DY+ L+ L+  NE  S  GA+  +IR+ P   + E   ++     SC++CL  F+   RVR++PC H FH +CIDPWL++ A CPVCKFPA+ 
Sbjct:   23 LQMLLSNRDFDSNDYERLMRLEALNER-SHDGATVQQIRQLPVISVTESMLEASEN-ASCAVCLNAFQVDARVRMMPCFHHFHPDCIDPWLQEKASCPVCKFPAIA 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JC42_9PHAE1.010e-10870.56RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CGW1_9STRA1.920e-4159.84Ubiquitin-protein ligase/ zinc ion binding protein... [more]
W7T4H0_9STRA1.120e-2445.45Zinc finger, RING-type n=2 Tax=Nannochloropsis gad... [more]
L1IY96_GUITC1.890e-2245.28RING-type domain-containing protein n=1 Tax=Guilla... [more]
A0A6G0WUI5_9STRA2.280e-2246.30RING-type domain-containing protein n=1 Tax=Aphano... [more]
A0A485LC69_9STRA4.340e-2245.05Aste57867_17819 protein n=1 Tax=Aphanomyces stella... [more]
A0A397AU11_9STRA8.870e-2244.55RING-type domain-containing protein n=1 Tax=Aphano... [more]
H3GXJ4_PHYRM1.390e-2140.77RING-type domain-containing protein n=1 Tax=Phytop... [more]
A0A7S2EWT1_TRICV1.870e-2143.31Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A3F2RQ68_9STRA2.050e-2144.34RING-type domain-containing protein n=1 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 206..246
e-value: 1.2E-7
score: 41.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 205..247
e-value: 1.5E-12
score: 47.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 206..247
score: 12.474524
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 167..250
e-value: 4.5E-19
score: 69.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..46
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 117..249
NoneNo IPR availablePANTHERPTHR45931:SF3SI:CH211-59O9.10coord: 117..249
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 206..247
e-value: 8.15714E-19
score: 75.4161
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 205..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:159356..163406 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.56.1mRNA_P-littoralis_Contig75.56.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig75 158686..165131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig75.56.1 ID=prot_P-littoralis_Contig75.56.1|Name=mRNA_P-littoralis_Contig75.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bp
MMSEMAAGGPDLALSNAEEGAGSPDTTTEAAGAAATTTTTTTSSRPHSRR
RALRAFSLMDLRSRRFVGFLAIFSVYSLVQTGALNWVLVAWGFCGTLLCM
SCVWLARVVHVYARRSNAARRRQQRIPLGALEARLQLRHPGIELGRLRLL
LVDRDFTGEDYQALLDLDDTNEVPSTVGASEGEIRRNPSFLIKEPAPDSV
VKPKSCSICLYPFKPRERVRIIPCLHQFHTECIDPWLRQNAICPVCKFPA
VG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD