prot_P-littoralis_Contig75.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig75.27.1
Unique Nameprot_P-littoralis_Contig75.27.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length83
Homology
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: D8LG10_ECTSI (Cytochrome c oxidase subunit 6b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG10_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.660e-48
Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0
Query:    1 MSSASKCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            MSSAS+ FKT P DSRFPTVNQANHCWNLYNEWVLCTKKAEEAG+   KC  KR NA+A+CPDEWTEKWDEDRDEGTYAGIK
Sbjct:    1 MSSASRYFKTAPSDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGDDAKKCYRKRHNALALCPDEWTEKWDEDRDEGTYAGIK 82          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: A0A7S4JKT8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JKT8_9STRA)

HSP 1 Score: 105 bits (263), Expect = 6.190e-28
Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 0
Query:    6 KCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKA--EEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            K  +TTP D+RFP+ NQ+NHCWN YNEW+LC K    +EAG     C+  RQ AV+ICP  W+EKWDE+R+E TY GIK
Sbjct:   31 KSVRTTPRDARFPSQNQSNHCWNRYNEWLLCLKSTGGDEAG-----CKHMRQMAVSICPSIWSEKWDEEREENTYPGIK 104          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: A0A7S4JKQ2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JKQ2_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.030e-27
Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 0
Query:    6 KCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKA--EEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            K  +TTP D+RFP+ NQ+NHCWN YNEW+LC K    +EAG     C+  RQ AV+ICP  W+EKWDE+R+E TY GIK
Sbjct:   73 KSVRTTPRDARFPSQNQSNHCWNRYNEWLLCLKSTGGDEAG-----CKHMRQMAVSICPSIWSEKWDEEREENTYPGIK 146          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: A0A8J2WWH0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWH0_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.720e-27
Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    9 KTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            KTTP D RFP+ NQA+HCWN YNE+V+C KK E   +    C+  RQ A++ICPD+W  KWDE+R+EGT++G+K
Sbjct:   40 KTTPYDKRFPSTNQASHCWNRYNEYVMCLKKTESDEDA---CKPMRQLALSICPDDWWNKWDEEREEGTFSGVK 110          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: A0A7S2SC35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SC35_9STRA)

HSP 1 Score: 103 bits (257), Expect = 4.780e-27
Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    1 MSSASKCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            MSS     KTT  D RFP  NQANHCWN YNEWV+C K  +   +    C+  RQ AV++CP EW EKWDE+R+EG +AGIK
Sbjct:   19 MSSIVNFMKTTQADKRFPNQNQANHCWNRYNEWVMCLKGTQGDEDA---CKGVRQLAVSLCPCEWVEKWDEEREEGAFAGIK 97          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: A0A7S2D0D8_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0D8_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.060e-27
Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    6 KCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            K  KT+P D RFP+ NQANHCWN YNEWV+C K    AG+    C+  RQ A++ICP++W+ KWDE+R+EG++AG++
Sbjct:   21 KMIKTSPSDKRFPSQNQANHCWNRYNEWVMCLKGT--AGDADA-CKGVRQMALSICPEDWSNKWDEEREEGSFAGVE 94          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: K0T774_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T774_THAOC)

HSP 1 Score: 103 bits (256), Expect = 7.620e-27
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    6 KCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            K  +TTP D+RFPT NQANHCWN YNEW+LC K   +  EGG  C+  +  A+ ICP  WT+KW+E+R+EGT+ GI+
Sbjct:   34 KATRTTPRDARFPTQNQANHCWNRYNEWLLCLKSTND--EGG--CKSMKNMALKICPSIWTDKWEEEREEGTFPGIQ 106          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: A0A7S2WRP3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRP3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.620e-27
Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    6 KCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            K  +TTP DSRFP+ NQANHCWN YNEW+LC K      EG   C+  R  A  ICP  WT+KWDE+R EGT+AGIK
Sbjct:   32 KAVRTTPRDSRFPSQNQANHCWNRYNEWLLCMKTTNSE-EG---CKTMRHLAAKICPTIWTDKWDEERGEGTFAGIK 104          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: B8BSI6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSI6_THAPS)

HSP 1 Score: 102 bits (253), Expect = 8.130e-27
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    9 KTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            +TTP D+RFPT NQANHCWN YNEW++C K  ++  EG   C+  R  AV ICP  WT+KWDE+R EG Y GIK
Sbjct:    1 RTTPRDARFPTQNQANHCWNRYNEWLVCLKSTQDE-EG---CKAMRNMAVKICPTIWTDKWDEERGEGIYPGIK 70          
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Match: A0A7S0GB85_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GB85_9STRA)

HSP 1 Score: 101 bits (252), Expect = 4.860e-26
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 0
Query:    9 KTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKCRFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK 82
            KTTP    FP+ NQA HCWN YNEWV+C K  E  G+ G KC   RQ A +ICPDEW EKWDE+R+EGT+ G+K
Sbjct:   50 KTTPRQHNFPSQNQAAHCWNRYNEWVVCMKTTE--GDRG-KCAGSRQLAGSICPDEWQEKWDEEREEGTFPGMK 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG10_ECTSI1.660e-4884.15Cytochrome c oxidase subunit 6b n=1 Tax=Ectocarpus... [more]
A0A7S4JKT8_9STRA6.190e-2858.23Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4JKQ2_9STRA2.030e-2758.23Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A8J2WWH0_9STRA2.720e-2756.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SC35_9STRA4.780e-2756.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D0D8_9STRA6.060e-2754.55Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
K0T774_THAOC7.620e-2755.84Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2WRP3_9STRA7.620e-2759.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BSI6_THAPS8.130e-2759.46Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S0GB85_9STRA4.860e-2660.81Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036549Cytochrome c oxidase, subunit VIb superfamilyGENE3D1.10.10.140Cytochrome c oxidase, subunit VIbcoord: 2..81
e-value: 1.3E-22
score: 81.7
IPR036549Cytochrome c oxidase, subunit VIb superfamilySUPERFAMILY47694Cytochrome c oxidase subunit hcoord: 8..80
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 16..75
e-value: 1.1E-10
score: 41.6
NoneNo IPR availablePIRSRPIRSR000278-1PIRSR000278-1coord: 4..80
e-value: 6.0E-20
score: 69.3
NoneNo IPR availablePANTHERPTHR46281CYTOCHROME C OXIDASE SUBUNIT 6Bcoord: 7..80
NoneNo IPR availablePANTHERPTHR46281:SF2CYTOCHROME C OXIDASE SUBUNIT 6Bcoord: 7..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:76791..81010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.27.1mRNA_P-littoralis_Contig75.27.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig75 75636..81010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig75.27.1 ID=prot_P-littoralis_Contig75.27.1|Name=mRNA_P-littoralis_Contig75.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=83bp
MSSASKCFKTTPLDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGEGGGKC
RFKRQNAVAICPDEWTEKWDEDRDEGTYAGIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036549Cyt_c_oxidase_su6B_sf
IPR003213Cyt_c_oxidase_su6B