prot_P-littoralis_Contig75.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig75.18.1
Unique Nameprot_P-littoralis_Contig75.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length338
Homology
BLAST of mRNA_P-littoralis_Contig75.18.1 vs. uniprot
Match: D8LG08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG08_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 1.070e-50
Identity = 99/118 (83.90%), Postives = 105/118 (88.98%), Query Frame = 0
Query:    2 PKVSQLLTRVLAREHDEDKSSSSS-EEDYGLQQMAANASAGLKMEMEMLRESRARDKVDGVDRKACIVDRNQFFNTQIGVGYQHKTVVRQRTVEQPSGAEQRVVDMSVAAATGSKGKR 118
            PK SQLL RVLAREHD D  S    E+DYGLQQMAANASAGLKMEMEMLRES+AR+K DGV+RKACIVDRNQFFNTQIG+GYQHKTVVRQRTVEQP+GA QRVVDMSVAAA G KGKR
Sbjct:    3 PKGSQLLNRVLAREHDGDGGSXXXXEDDYGLQQMAANASAGLKMEMEMLRESKAREKKDGVERKACIVDRNQFFNTQIGIGYQHKTVVRQRTVEQPTGAGQRVVDMSVAAARGKKGKR 120          
BLAST of mRNA_P-littoralis_Contig75.18.1 vs. uniprot
Match: A0A835Z3W9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.040e-8
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 0
Query:   23 SSSEEDYGLQQM-----AANASAGLKMEMEMLRESRARDKVDGVDRKA-CIVDRNQFFNTQIGVGYQHKTVVRQRTVEQPSGAEQRVVDMSVAAATGSKGK-RHR 120
            SSS++  G+ ++     +A   AGL MEME+ R+ RAR+  +G       IVD+ QF NT++G GYQHKTVVRQR+    +    ++VDM+ A A   K K RH+
Sbjct:   12 SSSDDGNGMSELKFIPRSAQTDAGLAMEMELTRDLRARELEEGDAAGGNFIVDQTQFRNTEVGKGYQHKTVVRQRSATN-AARPMKIVDMTQARAPTEKHKDRHK 115          
BLAST of mRNA_P-littoralis_Contig75.18.1 vs. uniprot
Match: W7TKF5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKF5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.220e-5
Identity = 29/55 (52.73%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   40 AGLKMEMEMLRESRARDKVDGVDRKACIVDRNQFFNTQIGVGYQHKTVVRQRTVE 94
            AGL++EM ++RE R RDK +  +R   IVDR  + N +IGVGYQHK V+RQ  V+
Sbjct:   13 AGLELEMALMREERQRDK-ELKERNTSIVDRRVWENHEIGVGYQHKNVMRQAVVQ 66          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig75.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LG08_ECTSI1.070e-5083.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3W9_9STRA1.040e-842.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TKF5_9STRA2.220e-552.73Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig75contigP-littoralis_Contig75:58675..61914 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig75.18.1mRNA_P-littoralis_Contig75.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig75 58524..62201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig75.18.1 ID=prot_P-littoralis_Contig75.18.1|Name=mRNA_P-littoralis_Contig75.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=338bp
MPKVSQLLTRVLAREHDEDKSSSSSEEDYGLQQMAANASAGLKMEMEMLR
ESRARDKVDGVDRKACIVDRNQFFNTQIGVGYQHKTVVRQRTVEQPSGAE
QRVVDMSVAAATGSKGKRHRRQEKKNGHQSDSDSSSDDSDDGRGRRKKKK
SSKSSSSNRKSKKRKKHSDKGREHAAKKEKKAKKEKRQRKRSKSTSRRGQ
RDLRAEEEEEEDERETVGSERRRQHTKKKKKRKHREISSPGERSNDGDSS
SSSCTSNSSSDSDEGGGSDDQANAAATDKSMPPPSPISRGAVGKRRLLTP
AEEKLDRARVPLQQLRDLLEKKIRSKQARTDDATDCD*
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