prot_P-littoralis_Contig745.4.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig745.4.2
Unique Nameprot_P-littoralis_Contig745.4.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length935
Homology
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 1104 bits (2856), Expect = 0.000e+0
Identity = 675/911 (74.09%), Postives = 728/911 (79.91%), Query Frame = 0
Query:   35 MKAKGDDHHYQHLVAQLLTRDDPETLWRLYVGLSQCVTTISQ-PNEFKELIDAVFRFDWRANDKVVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLSPLDLDGEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADA-LAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGG-MQAPMSTMSLRLSTASVAGSGSK-------SRVADHMLFFSVCQATFYVVCFRGDELAATDGFSDQAAIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSST-WTPSRVTKAGGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRNFDAMDANSLSYRDEASGGLLEARRFRRAQXXXXXXXXXXXXXXXLLDGSGARRRGEXXXXXXXXXXXXXXXXXARRMSRRMADTYITESMSITPGSSVAVGSLMGRSLGHAMSSSFADDGLVWGAAGPGGXXXXVGTPDDAYFHEDVSPSVSPPAAASGISGGGRSRPLDVGGIRSKRALF 934
            MKAKGD HHYQHLVAQLLTRDDPETLWRLY+GLSQCVT ISQ P+EFKEL+DA+FRFDWR +DK+VQSFSGLL HLVSANSTCMVPAMHMLVRNLVL+P DLD EGNVDPAALTRQHNVHAALQASLTLVPSGRSKLF VLKQNYPHRRLR EVLSDYALHALRVVQYAPLIEESVLRLIIEK LEIDVEIKIMDTGEAV+DDE+DE DALFTMDDV+DGTA+ K Q+T+EVDEMADKLD VMLVVF YLDQRLTA+ASLPPE ILGTP+AG                      SG+ +     S GG QGMEPVARLLKSLLLVFEE+ILPTHRSKFVQFVLFFASGRA GLG+AL +KLV VL DESRPKLTRQSSVAYLASFLAR SFVD SLVS++VQSLLDWAGQYLDQ+ADA +A P QA+GTP  K F+TPVA+R+RARPQSWHG++P  SA G + GGG MQAPMS M+ R                   SR ADHMLF+SVCQATFYV+CFRGDELAA +GF  QA IWQRLLTCPLYPLRRCLDTVRREFARLCCGLMD YLD DLLEHLAGISEE  QVSQTITVGSSFSCSTPRS+SS S+SS+  WTPSRVTKAGGLGRGS+PL+SFFPFDPYLLRRSHVY+  MYN+WKAQDDS                  XXXXXXXXXXXXXXXXXXXXXXXXXXX                    MDA+S+S+RD ASG  L AR   +         XXXXXXXX            XXXXXXXXXXXXXXXX ARRMSR+MADTYITESMS+TP SSVAVGSLMGRSLG AMSSSFADDGLVWG  G GG     GTPDDA+FHE+VSP  SPP A +GISG  RSRPLD+G +RSKRALF
Sbjct:    1 MKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVIDDEEDECDALFTMDDVVDGTADKKKQTTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILGTPVAGDGGCEAAAATQAVLQGDEAGSDSGTLKGRGGGSTGGMQGMEPVARLLKSLLLVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLGDESRPKLTRQSSVAYLASFLARASFVDPSLVSTAVQSLLDWAGQYLDQYADASVATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGGGGVMQAPMSAMAARSGXXXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQAVIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDAYLDRDLLEHLAGISEERSQVSQTITVGSSFSCSTPRSSSSMSMSSNAMWTPSRVTKAGGLGRGSNPLDSFFPFDPYLLRRSHVYIDQMYNTWKAQDDSSRRSTKSSGARTPAGAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXD-------------------MDASSMSFRDGASG--LRARSLHQRNEAAKKKKXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXEARRMSRKMADTYITESMSVTPASSVAVGSLMGRSLGQAMSSSFADDGLVWGT-GAGGA---AGTPDDAFFHENVSPCPSPPLADAGISG--RSRPLDIG-VRSKRALF 880          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: A0A6H5JAN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN6_9PHAE)

HSP 1 Score: 783 bits (2021), Expect = 3.960e-274
Identity = 425/556 (76.44%), Postives = 462/556 (83.09%), Query Frame = 0
Query:   19 RDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQLLTRDDPETLWRLYVGLSQCVTTISQ-PNEFKELIDAVFRFDWRANDKVVQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLSPLDLDGEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAA--AXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADA-LAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGM-QAPMSTMSLRLSTASVAGSGSK--------SRVADHMLFFSVCQATFYVVCFRGDELAATDGFSDQAAI 561
            +DGLLPVVKFLQSALAMKAKGD HHYQHLVAQLLTRDDPETLWRLY+GLSQCVT ISQ P+EFKEL+DA+FRFDWR +DK+VQSFSGLL HLVSANSTCMVPAMHMLVRNLVL+P DLD EGNVDPAALTRQHNVHAALQASLTLVPSGRSKLF VLKQNYPHRRLR EVLSDYALHALRVVQYAPLIEESVLRLIIEK LEIDVEIKIMDTGEAVVDDEDDE DALFTMDDV+DGTA+ K QST+EVDEMADKLD VMLVVF YLDQRLTA+ASLPPE IL T +AG     A                  +  GR G   S GG QGMEPVARLLKSLL+VFEE+ILPTHRSKFVQFVLFFASGRA GLG+AL +KLV VL+DESRPKLTRQSSVAYLASF+AR SFVD SLVS++VQSLLDWAGQYLDQ+ADA +A P QA+GTP  K F+TPVA+R+RARPQSWHG++P  SA G + GGGM  APMS ++ R                    SR ADHMLF+SVCQATFYV+CFRGDELAA +GF  QA +
Sbjct:   28 QDGLLPVVKFLQSALAMKAKGDGHHYQHLVAQLLTRDDPETLWRLYLGLSQCVTIISQQPDEFKELVDALFRFDWRGSDKIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMDTGEAVVDDEDDECDALFTMDDVVDGTADNKKQSTDEVDEMADKLDGVMLVVFNYLDQRLTANASLPPETILETSVAGDGGCEAVAAAQAVLQGDEAGSDSCTPKGRGG--GSTGGMQGMEPVARLLKSLLVVFEENILPTHRSKFVQFVLFFASGRARGLGYALVSKLVGVLKDESRPKLTRQSSVAYLASFVARASFVDPSLVSTAVQSLLDWAGQYLDQYADASIATPVQALGTPSSKGFETPVATRVRARPQSWHGNHPRRSANGGDGGGGMIDAPMSAVASRSGVGGXXXXXXXXXXXXXXXSRPADHMLFYSVCQATFYVMCFRGDELAAMEGFDSQALL 581          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: A0A3M6VKK9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKK9_9STRA)

HSP 1 Score: 228 bits (582), Expect = 8.580e-59
Identity = 218/732 (29.78%), Postives = 328/732 (44.81%), Query Frame = 0
Query:   15 TSVDRDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQL-LTRDDPETLWRLYVGLSQCVTTIS-QPNEFKELIDAVFRFDWRAND--KVVQSFSGLLSHLVSANSTCMVPAMHMLVRNL------VLSP---LDLDGEGNVD-----------------------PAALTRQHN---------------VHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELAATD---GFSDQAAI-WQRLL-TCPLY-PLRRCLDTVRREFARLCCGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKAGGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            TS  ++ +L + +F+++AL +  KG+   YQ+L+ QL L      T  +++  L +C++TI+ +P  ++ L+D +F+FD  AN   + V  ++  + HLVS+N+  +VP +HMLVRN+       LSP      D E N                         PAA T Q +                H  L+  LTLVP+  + LF +L +++PH+R+       Y  + LRV +Y   + E VL L+I++ + IDVEIK+           D+  + +FTMDD +D      + S+ +VDEMADKLD++ML++F +++Q   + AS  P  +    +A  AA                            S+ G    M   A + K LL VFE SIL THRSK+ QF+LF+             ++L+    D   P  TRQS  AYLASFLAR  ++  + +  ++  LL W    +D + DA+                      +  + Q+             N   G  A      L      V  +G  S      ++ S  Q   Y++CFRG E+A +D   G+    ++ W+RL+ T   Y PL  C  TV  EF  L      D +  + LE +  ++      S T T  S      P + S+   SSST    R            PL +FFPFDPYLLRRS  YV  +Y  WK  D
Sbjct:  178 TSPTKEEVLSMHRFIENALDLLLKGNPKSYQYLIQQLTLIPASIATRRKIFRALPRCISTIAREPKAYRALLDVLFKFDLLANGDPQEVDDYTRFIVHLVSSNTVYVVPTLHMLVRNMRHPQLKELSPELRALADAEQNKQQEAKKTAASGDIAMENSFGAMSTPAAETVQESKGSSLDERIQARFQAAHHTLERVLTLVPTAANVLFPILCEHFPHKRMDAATQMGYLRNVLRVTEYVGGLRERVLGLVIDQLVAIDVEIKL-----------DESEEDVFTMDDFLDDDMLPPDDSSRQVDEMADKLDQMMLIMFEHIEQ---SAASCSPVLVSSETIASTAA----------------------------SNGGKDVDMRQAALVFKYLLKVFEHSILNTHRSKYPQFLLFYVCRLDPQFQDIFISQLLASSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDLY-DAI---------------------HLEQQEQA-------------NDRVGESAAEQEERLLEGAEKVESAGEHS--FQESIYISSLQTVCYMMCFRGLEIATSDNGAGYEFLRSLGWERLIVTSSGYCPLAYCQQTVATEFLNLLEAF--DLVSEECLERV-DLAIGTVSTSSTKTAKSMERSKKPTAGSA---SSSTLLSQR-----------QPLETFFPFDPYLLRRSFRYVGPLYLYWKHAD 813          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: A0A8K1C8A3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8A3_PYTOL)

HSP 1 Score: 225 bits (573), Expect = 1.750e-58
Identity = 199/726 (27.41%), Postives = 324/726 (44.63%), Query Frame = 0
Query:   15 TSVDRDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQL---LTRDDPETLWRLYVGLSQCVTTIS-QPNEFKELIDAVFRFDWRANDKVVQSFSGLLSHLVSANSTCMVPAMHMLVRNL-------------------------VLSPLDLDGEGNVD----PAALT------------RQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELA-ATDGFSDQAAI-WQRLLTCPLY--PLRRCLDTVRREFARLCCGLMDDYLDPDLLEHL-AGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKAGGLGRG-SDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            T V  + L  + +F+++AL +  KG+  +Y +L+ QL     + +  T  R++  L +C++T++ +P  + +L+D +F+FD+      + +++  + HLVS+N+  ++P + ML+RNL                          +  + + G         PAA T            R  +VH  LQ  L LVP+  + LF+V+ +++PH+RL       Y  + L +  Y P ++E +  LII+  + +DVEIK+           D++ + +FTMDD +D   ++      +VDEMADKLD++M+++F Y+D+++                                              GR SS      +E  A++ K LL VFE SIL THRSK+ QF+LFF             ++L+    D   P  TR S  AYLASFLAR  F+  S +  ++  LL W    +D + D L  P Q      P    + V  R                       GG++A  + +  +        +GS+       ++ S  Q   Y++CFRG E+A A +G+     + W+RLL  P    PL  C  TV  EF         D +  + ++ +   I+  G    ++     S   + P  ++S+ + SST        +GG   G   PL +FFPFDPYLLRRS  ++  +Y  WK  D
Sbjct:   16 TPVGDEDLDTLQQFIENALDLMLKGNATNYLYLIQQLSGAAGKSNKNTRRRIFQTLPRCISTMAKEPKAYHQLLDVLFKFDFLCERDEIDAYTSFIVHLVSSNTVYVLPTLQMLLRNLCRPAQLPPALAAAVAAQAKPAPAPVTVGKIAIGGSFGAPVAPVPAAPTPEPIDVEKLIKERFADVHKTLQRVLKLVPTASNALFSVVAEHFPHKRLDAPFQIAYLANVLELSTYVPGLQERIFGLIIDHLVAVDVEIKL-----------DEKEEDVFTMDDFLDD--DLLPGDGTQVDEMADKLDQMMVLMFEYIDRQV----------------------------------------------GRSSSSATLSNVEQAAQIFKFLLKVFEHSILNTHRSKYPQFLLFFTCQMDPQFQDIFISQLLTASLDPQTPPSTRHSCGAYLASFLARAKFISVSYIQKALYHLLKWMHDQMDVY-DTLFVPSQ------PDEDSSSVDGR-----------------------GGIEAEAAALEPK--------NGSEPGAFHESIYISTLQTVCYLICFRGLEVAQAENGYEFLRTLGWERLLITPTSYCPLAFCQQTVATEFLNFAETF--DLVSEECIDQVDQAINSVGKLQKRSSKGSKSMERTAPPPSASSMMPSST--------SGGSVLGLRQPLETFFPFDPYLLRRSFRFIGPLYLYWKHAD 634          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: A0A3R7JLG2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JLG2_9STRA)

HSP 1 Score: 221 bits (562), Expect = 6.040e-57
Identity = 212/722 (29.36%), Postives = 318/722 (44.04%), Query Frame = 0
Query:   22 LLPVVKFLQSALAMKAKGDDHHYQHLVAQLLTRDDP-ETLWRLYVGLSQCVTTIS-QPNEFKELIDAVFRFDWRANDKVVQSFSGLLSHLVSANSTCMVPAMHMLVRNL-----------VLSPLDLDGEG----------------------------------NVDPAALTRQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELAATD---GFSDQAAI-WQRLL-TCPLY-PLRRCLDTVRREFARLCCGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSC-STPRSASSTSVSSSTWTPSRVTKAGGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            +  + +F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++T++ +P  ++ L+D +F+FD   + + V+ +   + HLVS+N+  +VP +HMLVRNL           + S L+ + E                                   N++     R   VH  L   L LVP+  + LF VL +++PH+RL  +    Y  + LRV  Y   + E VL L+I++ + IDVEIK+           D+  + +FTMDD +D      + ++ +VDEMADKLDR+MLV+F ++ Q ++A  S   + +                            AS    NG+ S       +   A + K LL VFE SIL THRSK+ QF+LF+             ++L+    D   P  TRQS  AYLASFL R  ++  + +  ++  LL W    +D +                 A    + +   AR       N   +A  D                L   S A   S SR     ++ S  Q   Y+VCFRG E++ +D   G+    ++ W+RLL T   Y PL  C  TV  EF  L   L  D +    LE +        Q    ++  SS S  S  RS   TS S+S         A  L     PL +FFPFDPYLLRRS  Y+  +Y  WK  D
Sbjct:   23 VASMHQFIENALDLLIKGNVKSYQYLIQQLTLSTAPVATRRKIFRALPRCISTMAKEPRAYRALLDVLFKFDLINDYQEVEDYISFVVHLVSSNTVYVVPTLHMLVRNLCRPQPHQLPPDLRSLLEEESEEPKKKTIAGGITIGGSFGAVAEVTTPVVESVNKGPNLEERIQKRFEAVHETLGRVLALVPTAANFLFPVLCEHFPHKRLDADTQVAYLRNVLRVTSYMSGLRERVLGLVIDQLVAIDVEIKL-----------DESEEDVFTMDDFLDDDLLPPDDASHQVDEMADKLDRMMLVMFEHIGQ-ISASISTQSDAV----------------------------ASVESSNGKTSV-----DVHHAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQMPPTTRQSCAAYLASFLGRAKYISVAYLQKALYHLLKWLHDQMDIY----------------DAAHQKLQNEQEAR-------NGESAAERDEC--------------LLEESEALEPSDSRGFQDNIYISTLQTVCYLVCFRGLEISCSDDGTGYEFLRSLGWERLLVTSTGYCPLAFCQQTVATEFLNLVETL--DLVSESCLERV-------DQAVGGVSASSSKSAKSMERSKKPTSASAS---------AAALLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWKHAD 644          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: A0A662XUA0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA0_9STRA)

HSP 1 Score: 219 bits (557), Expect = 5.880e-56
Identity = 204/729 (27.98%), Postives = 324/729 (44.44%), Query Frame = 0
Query:   16 SVDRDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQLLTRD-DPETLWRLYVGLSQCVTTIS-QPNEFKELIDAVFRFDWRANDKVV--QSFSGLLSHLVSANSTCMVPAMHMLVRNL----------------------------------------VLSPLDLDGEG---NVDPAALTRQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELAATD---GFSDQAAI-WQRLL-TCPLY-PLRRCLDTVRREFARLC--CGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKAGGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            S+  + ++ +  F+++AL +  KG+   Y +LV QL      P T  +++  L +C++T++ +P  ++ L+D +F+FD  A D  +  Q ++  + HLVS+N+  ++P +HMLVRNL                                        + SP+  + +    ++D     R    HA L+  L LVP+  + LF VL +++PH+R+       Y  + LRV  Y   + E VL L+I++ + IDVEIK+           D+  + +FTMDD +D      + ++ +VDEMADKLD++MLV+F +++Q                  AG   +                 AS    NG +        +   A + K LL VFE SIL THRSK+ QF+LF+             ++L+    D   P  TRQS  AYLASFLAR  ++  + +  ++  LL W    +D +                 A Q  +  ++ AR          G +  D               R+   + A   S++R     +F S  Q   Y++CFRG E+A +D   G+    ++ W+RLL T   Y PL  C  TV  EF  L     L+ +     + + + G+S +  + ++      S   ST  + SS S             A  LG+   PL +FFPFDPYLLRRS  ++  +Y  WK  D
Sbjct:   96 SISEEEVVSMHHFIENALDLLLKGNGKSYHYLVQQLTAASAPPATRRKIFRALPRCISTMAREPRAYRALLDVLFKFDLLAGDDPLEAQDYARFVVHLVSSNTVYVIPTLHMLVRNLCRPQLHQLPPALQTQARAEAAAEAELKKPSNGVTIAIGGSMASPVPTEEKKKAPSLDERIQMRFDAAHATLERVLALVPTAANVLFPVLCEHFPHKRMDAATQVAYLRNVLRVTTYVSGLRERVLALVIDQLVAIDVEIKL-----------DESEEDVFTMDDFLDDDLLPPDDASRQVDEMADKLDQMMLVMFEHIEQ------------------AGSVESP----------------ASTDLSNGEKEL-----DVRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRLDPQFQDVFISQLLATSLDPQTPPTTRQSCAAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVY----------------DAAQQQLQEQLDARV---------GESAVDRE------------ERVLEEAEALETSEARGFQESIFISTLQTVCYLLCFRGLEIARSDDGAGYDFLRSLGWERLLVTSSGYCPLAFCQQTVATEFLNLVETFDLVSESCLDRVDQAIGGVSAKSSKAAK------SMERSTKPTVSSASA------------ATLLGQ-RQPLETFFPFDPYLLRRSFRFIGPLYLYWKHAD 718          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: H3GYT5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT5_PHYRM)

HSP 1 Score: 214 bits (545), Expect = 1.730e-55
Identity = 200/720 (27.78%), Postives = 312/720 (43.33%), Query Frame = 0
Query:   22 LLPVVKFLQSALAMKAKGDDHHYQHLVAQLLTRDDP-ETLWRLYVGLSQCVTTIS-QPNEFKELIDAVFRFDWRANDKV--VQSFSGLLSHLVSANSTCMVPAMHMLVRNL--------------------VLSPLD-----LDGEGNVDPAAL-----------------TRQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELAATD---GFSDQAAI-WQRLLTCPL--YPLRRCLDTVRREFARLCCGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKAGGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            +  +  F+++AL +  KG+   Y +L+ QL     P  T  +++  L +C++ ++ +P  ++ L+D +F+FD  A+     V  ++  + HLVS+N+  +VP +HMLVRNL                     L P+      + G    D AA+                  R    HA L+  L LVP+  + LF +L +++PH+R+       Y  + LRV  Y   + E VL L+I++ + IDVEIK+           D+  + +FTMDD +D      + ++ +VDEMADKLD++MLV+F +++    + +    E +  T                                   SS      +   A + K LL VFE SIL THRSK+ QF+LF+             ++L+    D   P  TRQS  AYLASFLAR  ++  + +  ++  LL W    +D + DA+            +  Q  V                    R   S    +  +   SL++ T       +  R     ++ S  Q   Y+VCFRG E+A  D   G+    ++ W+RLL       PL  C  TV  EF  L      D +  + LE          +V QTI   S+ S  + +S   +   ++   P+       LG+   PL +FFPFDPYLLRRS  Y+  +Y  WK  D
Sbjct:   23 VASMQHFIENALDLLVKGNAKSYDYLLQQLTLAPAPVATRRKIFRALPRCISAMAREPRAYRALLDVLFKFDMLASGDPLEVDDYTSFVVHLVSSNTVYVVPTLHMLVRNLRRPQTKELPPDLKAQIQEQETLKPVKTGAIAIGGSFGADVAAVPTPLVEPKAPSLDERIQARFEAAHATLERVLALVPTATNVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVIDQLVAIDVEIKL-----------DESEEDVFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEHSAASSSPASVETVAPT---------------------------------ETSSNEKDVNVRQAALIFKHLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPHTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVY-DAVHQE---------QMDQDEV--------------------RNGESAAEREERLLEESLKMET-------NGERGFQESIYISTLQTVCYLVCFRGLEIATNDDGAGYEFLRSLGWERLLVAGTGYCPLAYCQQTVATEFLNLVETF--DLVSEECLE----------RVDQTIGTVSALSIKSAKSMERSKKPTAGSAPAATL----LGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHAD 644          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: A0A0P1AK49_PLAHL (Rna polymerase i-specific transcription initiation factor rrn3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AK49_PLAHL)

HSP 1 Score: 216 bits (551), Expect = 2.370e-55
Identity = 202/746 (27.08%), Postives = 324/746 (43.43%), Query Frame = 0
Query:    1 MAGASSQQQHWQGETSVD--RDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQLLTRDDP-ETLWRLYVGLSQCVTTISQPNE-FKELIDAVFRFDWRANDKV--VQSFSGLLSHLVSANSTCMVPAMHMLVRNLVLS-----PLDLDGEGNVDPA---ALTRQHNV---------------------------------HAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLD----QHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELAATD---GFSDQAAI-WQRLL--TCPLYPLRRCLDTVRREFARLCCGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKAGGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            MAGA++      G ++     + +  + +F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++T+++ +  ++ L+D +F+FD  A+     V+ ++  + HLVS+N+  +VP +HMLVRN+        P DL  + + D A   A+ R  N+                                 H  L+  L LVP+  + LF +L +++PH+R+       Y  + LRV +Y   + E VL L++++ + IDVEIK+           D+  + +FTMDD +D      + ++  +DEMADKLD++MLV+F +++Q  T+  S         P+                                 S+   +  M     + K LL VFE SIL THRSK+ QF+LF+             ++L+    D   P  TR S  AYLASFLAR  ++  + +  ++  LL W    +D     H D      + +GT  PK  +  +                                    S +L   SV G           +F S  Q   Y++CFRG E+A +D   G+    ++ W+RLL       PL  C  TV  EF  L      D +  + LE +        Q   T TV ++ +  +   +   +V S++        A  L     PL +FFPFDPYLLRRS  Y+  +Y  WK  D
Sbjct:   31 MAGAAALIHSTLGTSTTPPTEEEVASMHQFIENALDLVIKGNTKSYQYLIQQLTLVPAPIVTRRKIFRALPRCISTMAREHHAYRALLDVLFKFDLLASGDPCEVEDYTNFIVHLVSSNTIYVVPTLHMLVRNMRRPQMKELPFDLRAQFDADQAKDEAIQRAGNIVIGESFSTNGSIEAHDTGELSLEERIQARFEAAHQTLKRVLVLVPTATNVLFPILCEHFPHKRMDASTQVAYLRNVLRVTEYVGGLRERVLGLVLDQLVAIDVEIKL-----------DESEEDVFTMDDFLDDDLLPSDNTSGRMDEMADKLDKMMLVMFQHIEQCATSSPSTSELADTVLPI-------------------------------EESNTYNNLNMRQATLIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRHSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDLYDAAHEDQQDKVERYVGTTTPKNEERVLEE----------------------------------SEKLEIKSVRG-------FQESIFISSLQTVCYMLCFRGLEIATSDDGAGYEFLRSLGWERLLITNTGYCPLAYCQQTVATEFLNLVETF--DLVSEECLERV-------DQAIGTATVPANLAAKSMEHSKKPTVGSAS--------ASTLIGQRQPLETFFPFDPYLLRRSFRYIGPLYLFWKHAD 676          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: D0NT31_PHYIT (RNA polymerase I-specific transcription initiation factor rrn3, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0NT31_PHYIT)

HSP 1 Score: 212 bits (539), Expect = 6.490e-54
Identity = 204/741 (27.53%), Postives = 318/741 (42.91%), Query Frame = 0
Query:   16 SVDRDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQLLTRDDP-ETLWRLYVGLSQCVTTIS-QPNEFKELIDAVFRFDWRANDKV--VQSFSGLLSHLVSANSTCMVPAMHMLVRNL-------------VLSPLDLDGEG---------------------------------------NVDPAALTRQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELAATD---GFSDQAAI-WQRLLTCP--LYPLRRCLDTVRREFARLCCGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKAGGLGRGS-----DPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            S   + +  +  F+++AL +  KG+   YQ+L+ QL     P  T  +++  L +C++T++ +P  ++ L+D +F+FD  A+     V+ ++  + HLVS+N+  +VP +HMLVRN+             VL+  +   E                                        ++D    +R    H  L+  LTLVP+  + LF +L +++PH+R+       Y  + LRV  Y   + E VL L++++ + IDVEIK+           D+  + +FTMDD +D      + ++ +VDEMADKLD++MLV+F +++Q  +A +S P                                 S S  +   S+   +  +   A + K LL VFE SIL THRSK+ QF+LF+             ++L+    D   P  TRQS  AYLASFLAR  ++  + +  ++  LL W    +D +  A     +  G       +T      R   +S            +N G                  + G     R     +F S  Q   Y+VCFRG E+A +D   G+    ++ W+RLL       PL  C  TV  EF  L      D +  + LE          +V Q I   SS          STS S+ +   S+   AG     +      PL +FFPFDPYLLRRS  Y+  +Y  WK  D
Sbjct:   17 SPTEEEVASMHHFIENALDLLIKGNAKSYQYLIQQLTLVPPPVATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPQEKELPPDLRVLAQTEQKNEEETTKKSTKAGGISIGGSFGADTVATPTPVAKVVHEAKGPSLDERIQSRFEAAHETLERVLTLVPTAANVLFPILCEHFPHKRMDASTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKL-----------DESEEDMFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ--SAVSSSP--------------------------------TSASSDSVASSTGDKNLDVRQAALIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDVYDAAHQEQQERDG-------ETAAERDERLLEES------------ENMG------------------ITG----DRGFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYDFLRSLGWERLLVTSGGYCPLAYCQQTVATEFLNLVEAF--DLVSEECLE----------RVDQAIGTVSS----------STSKSAKSMERSKKPTAGSASASTLLGQRQPLETFFPFDPYLLRRSFRYIGPLYLYWKHAD 649          
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Match: A0A0W8CKU1_PHYNI (RNA polymerase I-specific transcription initiation factor RRN3 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CKU1_PHYNI)

HSP 1 Score: 212 bits (540), Expect = 2.940e-53
Identity = 202/736 (27.45%), Postives = 316/736 (42.93%), Query Frame = 0
Query:   16 SVDRDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQLLTRDDP-ETLWRLYVGLSQCVTTIS-QPNEFKELIDAVFRFDWRANDKV--VQSFSGLLSHLVSANSTCMVPAMHMLVRNL----------------------------------------------------VLSPLDLDGEGNVDPAALTRQHNVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQYAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDVIDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILGTPLAGRAAAXXXXXXXXXXXXXXXXXASGSGRNGRRSSVGGSQGMEPVARLLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRDESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHADALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGMQAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELAATD---GFSDQAAI-WQRLL-TCPLY-PLRRCLDTVRREFARLCCGLMDDYLDPDLLEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKAGGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQD 689
            S   + +  +  F+++AL +  KG+   Y +L+ QL     P  T  +++  L +C++T++ +P  ++ L+D +F+FD  A+     V+ ++  + HLVS+N+  +VP +HMLVRN+                                                    V+ P+      ++D     R    H  L+  LTLVP+  + LF +L +++PH+R+       Y  + LRV  Y   + E VL L++++ + IDVEIK+           D+  + +FTMDD +D      + ++ +VDEMADKLD++MLV+F +++Q   + AS  P  +    +A                            NG +        +   A + K LL VFE SIL THRSK+ QF+LF+             ++L+    D   P  TRQS  AYLASFLAR  ++  + +  ++  LL W    +D +     A  + +   G  A +     R+    +  H +                                      R     +F S  Q   Y+VCFRG E+A +D   G+    ++ W+RLL T   Y PL  C  TV  EF  L      D +  + LE          +V Q I    + S ST +SA S   S    T    + +  LG+   PL +FFPFDPYLLRRS  Y+  +Y  WK  D
Sbjct:  236 SPTEEEVASMHHFIENALDLLIKGNAKSYHYLIQQLTLVPPPIATRRKIFRALPRCISTMAREPKAYRALLDVLFKFDLLASGDPLEVEDYTSFIVHLVSSNTVYVVPTLHMLVRNMRRPHEKELPPDLRALAQTEQNKEMEAAKKPAKTGGIAIGGSFGADTVAAPTPVVEPVQQAKGPSLDERIQARFEAAHQTLERVLTLVPTAANVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVLDQLVAIDVEIKL-----------DESEEDMFTMDDFLDDDMLPPDDASRQVDEMADKLDQMMLVMFEHIEQ---SAASSSPASVSSDSVAA---------------------------NGDKDV-----DVRQAAVIFKYLLKVFEHSILNTHRSKYPQFLLFYVCRMDPQFQDVFISQLLATSLDPQTPPTTRQSCGAYLASFLARAKYISVAYLQKALYHLLKWLHDQMDIYD---VAHQEQLEREGETAAERD--ERLLEESEKMHTTG------------------------------------ERGFQESIFISSLQTVCYMVCFRGLEIATSDDGAGYEFLRSLGWERLLVTSSGYCPLAYCQQTVATEFLNLVEAF--DLVSEECLE----------RVDQAI---GTVSASTTKSAKSMERSKKP-TAGSASASTLLGQ-RQPLETFFPFDPYLLRRSFRYIGPLYLYWKHAD 867          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig745.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL61_ECTSI0.000e+074.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAN6_9PHAE3.960e-27476.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M6VKK9_9STRA8.580e-5929.78Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A8K1C8A3_PYTOL1.750e-5827.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7JLG2_9STRA6.040e-5729.36Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A662XUA0_9STRA5.880e-5627.98Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
H3GYT5_PHYRM1.730e-5527.78Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0P1AK49_PLAHL2.370e-5527.08Rna polymerase i-specific transcription initiation... [more]
D0NT31_PHYIT6.490e-5427.53RNA polymerase I-specific transcription initiation... [more]
A0A0W8CKU1_PHYNI2.940e-5327.45RNA polymerase I-specific transcription initiation... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007991RNA polymerase I specific transcription initiation factor RRN3PFAMPF05327RRN3coord: 521..687
e-value: 6.6E-23
score: 81.1
coord: 26..452
e-value: 3.8E-67
score: 227.1
IPR007991RNA polymerase I specific transcription initiation factor RRN3PANTHERPTHR12790TRANSCRIPTION INITIATION FACTOR IA RRN3coord: 20..866
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 739..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..814
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..727
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 884..934
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 690..835

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig745contigP-littoralis_Contig745:45570..66859 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig745.4.2mRNA_P-littoralis_Contig745.4.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig745 44894..68300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig745.4.2 ID=prot_P-littoralis_Contig745.4.2|Name=mRNA_P-littoralis_Contig745.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=935bp
MAGASSQQQHWQGETSVDRDGLLPVVKFLQSALAMKAKGDDHHYQHLVAQ
LLTRDDPETLWRLYVGLSQCVTTISQPNEFKELIDAVFRFDWRANDKVVQ
SFSGLLSHLVSANSTCMVPAMHMLVRNLVLSPLDLDGEGNVDPAALTRQH
NVHAALQASLTLVPSGRSKLFAVLKQNYPHRRLRPEVLSDYALHALRVVQ
YAPLIEESVLRLIIEKSLEIDVEIKIMDTGEAVVDDEDDESDALFTMDDV
IDGTANIKNQSTEEVDEMADKLDRVMLVVFTYLDQRLTAHASLPPEQILG
TPLAGRAAAAAAAGAEAGEEEAGSGDASGSGRNGRRSSVGGSQGMEPVAR
LLKSLLLVFEESILPTHRSKFVQFVLFFASGRAHGLGHALTAKLVDVLRD
ESRPKLTRQSSVAYLASFLARGSFVDASLVSSSVQSLLDWAGQYLDQHAD
ALAAPPQAIGTPGPKAFQTPVASRIRARPQSWHGSNPPGSARGDNSGGGM
QAPMSTMSLRLSTASVAGSGSKSRVADHMLFFSVCQATFYVVCFRGDELA
ATDGFSDQAAIWQRLLTCPLYPLRRCLDTVRREFARLCCGLMDDYLDPDL
LEHLAGISEEGPQVSQTITVGSSFSCSTPRSASSTSVSSSTWTPSRVTKA
GGLGRGSDPLNSFFPFDPYLLRRSHVYVASMYNSWKAQDDSASSRRRRRK
RQNGTRTKTTTPSGHDDDDRPRRGVEDSDSPSSSSVSSEDDDDSSDDDED
DRNFDAMDANSLSYRDEASGGLLEARRFRRAQRRAERGSKEGGEKGGLLD
GSGARRRGESSEESSSGEEGDGDDEEARRMSRRMADTYITESMSITPGSS
VAVGSLMGRSLGHAMSSSFADDGLVWGAAGPGGGGGGVGTPDDAYFHEDV
SPSVSPPAAASGISGGGRSRPLDVGGIRSKRALF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007991RNA_pol_I_trans_ini_fac_RRN3