prot_P-littoralis_Contig740.25.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig740.25.2
Unique Nameprot_P-littoralis_Contig740.25.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length302
Homology
BLAST of mRNA_P-littoralis_Contig740.25.2 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 6.340e-98
Identity = 164/218 (75.23%), Postives = 167/218 (76.61%), Query Frame = 0
Query:    1 MDMDTATVSTPARQSLGTRPAVTRTQSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCTAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVK--------DEDLACYCGLKKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEHGADGSWKFKTSKGGTPVSDIL 210
            MDMDTATVSTPARQSLGTRPAVT TQSAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYP GF+PGREGSDGAKLPVYMFLQQG LEEGVQEH TA VHA VARWWSS ADSNEDRAFTGN TSTGKILA+VVK        DEDLA Y GLKKSFSG                            WAEE+ ADGSWKFKTSKGGTPVS  L
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTTAEVHAHVARWWSSYADSNEDRAFTGNRTSTGKILASVVKADLYIPRQDEDLAFYYGLKKSFSG----------------------------WAEEYSADGSWKFKTSKGGTPVSVSL 211          
BLAST of mRNA_P-littoralis_Contig740.25.2 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 1.510e-54
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
Query:    1 MDMDTATVSTPARQSLGTRPAVTRTQSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCT 101
            MDMDTATVSTPARQSLGTRPAVT TQSAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYPRGF+PGREGSDGAKLPVYMFLQQG LEEGVQEH T
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTT 122          
BLAST of mRNA_P-littoralis_Contig740.25.2 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.630e-29
Identity = 64/93 (68.82%), Postives = 75/93 (80.65%), Query Frame = 0
Query:  208 DILEMRFAHTRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS 300
            DILE RFAH R GMG HKAPTA+QAA+   HGDTCR+SHG +RRN+SRS G  F++Q  A++RVALPVNA ER EVVRAATW   DHVFE+R+
Sbjct:  800 DILEHRFAHIRTGMGTHKAPTATQAARQAKHGDTCRVSHGLQRRNASRSTGS-FEVQSSASIRVALPVNASEREEVVRAATWDRDDHVFESRA 891          
BLAST of mRNA_P-littoralis_Contig740.25.2 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 6.360e-22
Identity = 54/93 (58.06%), Postives = 63/93 (67.74%), Query Frame = 0
Query:  208 DILEMRFAHTRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERRRNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS 300
            DILE RFAH R+G G HK PTA QA +A   GDT R+ HG RRRNSSRS G  F ++    +R A P NA ER +VVRA T  +A HVFE+RS
Sbjct:  576 DILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSAGMAFQLEDSQGVRAAFPANASERAQVVRAETRDDAHHVFESRS 668          
BLAST of mRNA_P-littoralis_Contig740.25.2 vs. uniprot
Match: A0A6H5K994_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K994_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 7.720e-13
Identity = 43/74 (58.11%), Postives = 50/74 (67.57%), Query Frame = 0
Query:  140 KDEDLACYCGLKKSFSGRSTTWVLSRSSLARERADAQWSFC--LPAGWAEEHGADGSWKFKTSKGGTPVSDILE 211
            +DEDLA Y GL+K  S + T WVLSRSSL  ERA+A  SF   LPAGW EE G D SW FK +  GTPV+  +E
Sbjct:   63 RDEDLAQYYGLRK-VSSKPTKWVLSRSSLGEERAEAHISFGFGLPAGWCEEFGPDHSWTFKKTHDGTPVAISVE 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig740.25.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KRI1_9PHAE6.340e-9875.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1G6_9PHAE1.510e-5494.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KFP1_9PHAE1.630e-2968.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Z3_9PHAE6.360e-2258.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K994_9PHAE7.720e-1358.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig740contigP-littoralis_Contig740:136102..137629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig740.25.2mRNA_P-littoralis_Contig740.25.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig740 136098..137636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig740.25.2 ID=prot_P-littoralis_Contig740.25.2|Name=mRNA_P-littoralis_Contig740.25.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=302bp
MDMDTATVSTPARQSLGTRPAVTRTQSAKKDEDERRKRRTSGPRAVGTDA
QQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHC
TAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVKDEDLACYCGL
KKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEHGADGSWKFKTS
KGGTPVSDILEMRFAHTRAGMGCHKAPTASQAAQAGMHGDTCRLSHGERR
RNSSRSGGQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADHVFETRS
V*
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