prot_P-littoralis_Contig74.9.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig74.9.2
Unique Name	prot_P-littoralis_Contig74.9.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	621

Homology

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BLAST of mRNA_P-littoralis_Contig74.9.2 vs. uniprot
Match: D7FMV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV0_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 2.800e-163
Identity = 356/497 (71.63%), Postives = 390/497 (78.47%), Query Frame = 0

Query:  128 NRIAQLVCAAGAGGASVARSARRHPKAAVAVTAATATAVWAAKESRTSGVLVSRSPRVSLFRPSDAYLSRVLESAADAPVASPLHGVILSPLDDPDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSRSSRVSLEKAAVAGGGEGEVTEIRVALARARNVAGEGSYTEQAFHEKGKGVKSVCAGVRVGRGLGLFHKFAQGLGNLDVFDGRSDCELLATESSSEDVGSTLGLLTRPALGTWSLCPLRVVLRRERTLPVPRDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRSRRSXXXXXXXXXGRSTAGARRGRDDKEEGEGDKEAV----DESHRQYTLAMSAVEGAGWSGTWVFRVTFDAETDEVWFETKLAQRKGAFGTTPGGDMVARINRVNQDMLARANKHAAVLRTREEQFSRVSSLARTRARDAKELARDRILNPDKYKRVHRYMREDSHTTGGPTARPARWGEERRRNDIRLK 620
            NRIAQ++ A GAGGAS AR AR HP+AAVA TA  ATA+W  KE+R SG+LV  SPR+SLFRPSDAYLSRVLE+AA+APVASPL GVILSPL DP  E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    G   EIR  L   ++ AG+G+Y  +A H  GKGVKSVCAGVRVG+GLG++HKFAQGLG LDVFDGRSDCEL+A ESSSEDVGSTLGLLTRPALGTWSL PLRVVL+RERTL VPR D      XXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXX                            +  HRQYTLA+SAVEGAGWSGTWVFRVT DAET+EVWFETKL+QRKG+FGTT GGD + R+ RVNQDMLARAN+H+AVLR REEQF+RVSSLAR+RA+DAK+LARDRIL+PDKYKRVHRYMREDSHTTGG +ARPARWGEERRRNDIRLK
Sbjct:   82 NRIAQMLSAVGAGGASAARCAREHPRAAVAATAGAATALWVGKETRRSGLLVCSSPRISLFRPSDAYLSRVLEAAAEAPVASPLRGVILSPLQDPQGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XGGAAEIRATLGIMKSGAGQGTYMHEATH--GKGVKSVCAGVRVGKGLGIYHKFAQGLGKLDVFDGRSDCELMAAESSSEDVGSTLGLLTRPALGTWSLSPLRVVLKRERTLAVPRSDDDGHGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERHHRQYTLALSAVEGAGWSGTWVFRVTLDAETEEVWFETKLSQRKGSFGTTAGGDQLVRVTRVNQDMLARANRHSAVLRAREEQFTRVSSLARSRAKDAKDLARDRILHPDKYKRVHRYMREDSHTTGGASARPARWGEERRRNDIRLK 575

[Close]

BLAST of mRNA_P-littoralis_Contig74.9.2 vs. uniprot
Match: A0A6H5KVX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX2_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 4.320e-27
Identity = 70/98 (71.43%), Postives = 77/98 (78.57%), Query Frame = 0

Query:  128 NRIAQLVCAAGAGGASVARSARRHPKAAVAVTAATATAVWAAKESRTSGVLVSRSPRVSLFRPSDAYLSRVLESAADAPVASPLHGVILSPLDDPDAE 225
            NRI  ++ A GAGGAS A  AR HP+AAVA TA  ATA+W  KE+R SGVLV  SPR+SLFRPSDAYLS VLESAA+APVASPL GVILSPL DP  E
Sbjct:   82 NRITHMLSAVGAGGASAAHYARAHPRAAVAATAGAATALWVGKETRRSGVLVCSSPRISLFRPSDAYLSWVLESAAEAPVASPLRGVILSPLQDPQGE 179

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig74.9.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig74.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FMV0_ECTSI	2.800e-163	71.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KVX2_9PHAE	4.320e-27	71.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 451..473
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..427
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 590..620
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 606..620
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..250

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig74	contig	P-littoralis_Contig74:13169..24036 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig74.9.2	mRNA_P-littoralis_Contig74.9.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig74 11939..24216 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig74.9.2 ID=prot_P-littoralis_Contig74.9.2|Name=mRNA_P-littoralis_Contig74.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=621bp
MERGTGRSAMHAHDKQQQQQQQQHPQQHHHVQNYHHRWCPPGPHQGLTTA
SSSTLGRTRNALSSSSSSLPSSSASSMFTTALIWCLLAALMVALAGGQQM
DPAEMQRMIQQQMGGSPGGGGGGGAPPNRIAQLVCAAGAGGASVARSARR
HPKAAVAVTAATATAVWAAKESRTSGVLVSRSPRVSLFRPSDAYLSRVLE
SAADAPVASPLHGVILSPLDDPDAEEEQEEQHEGGGSERGSEEERGSSGR
RRVGGGGGSSSRSSRSSRVSLEKAAVAGGGEGEVTEIRVALARARNVAGE
GSYTEQAFHEKGKGVKSVCAGVRVGRGLGLFHKFAQGLGNLDVFDGRSDC
ELLATESSSEDVGSTLGLLTRPALGTWSLCPLRVVLRRERTLPVPRDDDG
DGSRGSRDRLGSSGSGKGSGGGSRSSSSSKRRRSRRSRKRSSRRRSGRST
AGARRGRDDKEEGEGDKEAVDESHRQYTLAMSAVEGAGWSGTWVFRVTFD
AETDEVWFETKLAQRKGAFGTTPGGDMVARINRVNQDMLARANKHAAVLR
TREEQFSRVSSLARTRARDAKELARDRILNPDKYKRVHRYMREDSHTTGG
PTARPARWGEERRRNDIRLK*