prot_P-littoralis_Contig74.88.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig74.88.2
Unique Nameprot_P-littoralis_Contig74.88.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length157
Homology
BLAST of mRNA_P-littoralis_Contig74.88.2 vs. uniprot
Match: D7FQY4_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY4_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.040e-71
Identity = 117/156 (75.00%), Postives = 123/156 (78.85%), Query Frame = 0
Query:    1 MDMDDDXXXXXXXXXXXXFTCDVGELLFGWWIVNTCRALYVSCLPVILLGVARHWVFHIATSTAASSKGTSASRTTALLDANGFESSSGQVRSSIGRWPRFVWTMVSTAGVALSLLSMLVIMTYNSGLFLAVLAGEAIGFWVWGNHSLPEAMRGCH 156
            M+MDDD            FTCDVGEL+FGWW VNTC A Y+SC+PVILL VARHW F IATSTA SSK  SASR TALLD NGFE+SSG  R  I RW RFVWTMVST G ALSLLSMLV+MTYNSGLFLAVL GEAIGF VWGNHSLPEAMRGCH
Sbjct:    1 MEMDDDMSSMNMSFS---FTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAIATSTATSSKRGSASRNTALLDGNGFENSSG--RPPINRWTRFVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFGVWGNHSLPEAMRGCH 151          
BLAST of mRNA_P-littoralis_Contig74.88.2 vs. uniprot
Match: A0A8H2ZHV1_9SACH (Copper transport protein n=1 Tax=Kazachstania barnettii TaxID=61262 RepID=A0A8H2ZHV1_9SACH)

HSP 1 Score: 55.1 bits (131), Expect = 1.710e-6
Identity = 42/135 (31.11%), Postives = 68/135 (50.37%), Query Frame = 0
Query:   26 LLFGWWIVNTCRALYVSCLPVILLGVARHWVFHIATSTAASSKGTSASRTTALLDANGFESSSGQVRSSIGRWPRFVWTMVSTAGVALSLLSMLVIMTYNSGLFLAVLAGEAIGFWVWGNH--SLPEAMRG--CH 156
            ++F WW + T     +SCL  I++G+A ++ +        +S+ T+++R +   + +G         S I R  +F  T+     V  S + MLV MTYN  L LAV+ G A+G++ W +   SLP   R   CH
Sbjct:   40 VVFNWWHIRTRLQFIISCL--IVVGLATYYEYLKFRFVKYASETTASNRVSTTTNGSGV--------SQIARREKFYRTIHYGIQVGFSFMLMLVFMTYNGWLMLAVVVGAALGYYRWNDSLVSLPMEQRSLACH 164          
BLAST of mRNA_P-littoralis_Contig74.88.2 vs. uniprot
Match: A0A1Y1IQ97_KLENI (Copper transport protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQ97_KLENI)

HSP 1 Score: 53.5 bits (127), Expect = 8.790e-6
Identity = 47/151 (31.13%), Postives = 69/151 (45.70%), Query Frame = 0
Query:   26 LLFGWWIVNTCRALYVSCLPVILLGVARHWVFHIATSTAASSKGTSASRTTALLDANGFESSSGQ---------VRSSIGR----WP-----RFVWTMVSTAGVALSLLSMLVIMTYNSGLFLAVLAGEAIGFWVWGNH--SLPEAMRGCH 156
            LLF  W++ +    YV+ + V L  V   W     TS  A  +G S S     LD +   S  G          ++ +  R    WP     RF+ + +    +  S L ML++MT+N GLFLAVLAG  +G+  +G H  S  ++   CH
Sbjct:   35 LLFQPWMIMSWPKYYVALVGVFLFCVLHEWFTTYRTSLDAELRGRSKSGADESLDFHLLPSGEGSSQRRDQETDLQPTSSRKPKTWPGTAAPRFLLSFLYAVNLGSSYLIMLIVMTFNGGLFLAVLAGLGVGYGAFGYHRGSSKQSSDLCH 185          
BLAST of mRNA_P-littoralis_Contig74.88.2 vs. uniprot
Match: A0A6M2DFP1_9NEOP (Copper transport protein n=2 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DFP1_9NEOP)

HSP 1 Score: 51.2 bits (121), Expect = 5.190e-5
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0
Query:   91 VRSSIGRWPRFVWTMVSTAGVALSLLSMLVIMTYNSGLFLAVLAGEAIGFWVWG--NHSLPEAMRGCH 156
            V+++I  W  FV T++    VA+S + MLV+MTYN  L LA++ G AIG++++G   +S  E    CH
Sbjct:  106 VKAAILNWRHFVQTLLHFLQVAISYILMLVVMTYNVWLCLAIVLGAAIGYFLFGWIRNSSYEVTEHCH 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.88.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FQY4_ECTSI1.040e-7175.00Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A0A8H2ZHV1_9SACH1.710e-631.11Copper transport protein n=1 Tax=Kazachstania barn... [more]
A0A1Y1IQ97_KLENI8.790e-631.13Copper transport protein n=1 Tax=Klebsormidium nit... [more]
A0A6M2DFP1_9NEOP5.190e-541.18Copper transport protein n=2 Tax=Pulicidae TaxID=7... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 15..143
e-value: 5.9E-11
score: 43.1
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 4..147
NoneNo IPR availablePANTHERPTHR12483:SF27COPPER TRANSPORTER 1A, ISOFORM C-RELATEDcoord: 4..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig74contigP-littoralis_Contig74:382677..387011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig74.88.2mRNA_P-littoralis_Contig74.88.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig74 381437..387011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig74.88.2 ID=prot_P-littoralis_Contig74.88.2|Name=mRNA_P-littoralis_Contig74.88.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=157bp
MDMDDDMSMDMTMNMSFTFTCDVGELLFGWWIVNTCRALYVSCLPVILLG
VARHWVFHIATSTAASSKGTSASRTTALLDANGFESSSGQVRSSIGRWPR
FVWTMVSTAGVALSLLSMLVIMTYNSGLFLAVLAGEAIGFWVWGNHSLPE
AMRGCH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter