prot_P-littoralis_Contig74.71.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig74.71.5
Unique Nameprot_P-littoralis_Contig74.71.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length73
Homology
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BLAST of mRNA_P-littoralis_Contig74.71.5 vs. uniprot
Match: D7FQZ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQZ0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.940e-19
Identity = 42/60 (70.00%), Postives = 49/60 (81.67%), Query Frame = 0 
Query:    1 GGXXXXXXXXXXNEYFVDTKLVFRLKQFVGDQRERGSLPTEDSALDYLLDKFKEYVRKPQ 60
            GG          ++YFVDTKL+FRLK+FV +Q+ERGSLPTED+ALDYLLDKFKEYVRKPQ
Sbjct:   10 GGGPGAGRTANNSDYFVDTKLLFRLKRFVTEQQERGSLPTEDAALDYLLDKFKEYVRKPQ 69
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BLAST of mRNA_P-littoralis_Contig74.71.5 vs. uniprot
Match: A0A835ZH15_9STRA (Putative ribosome biogenesis ATPase RIX7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH15_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.320e-7
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:   15 YFVDTKLVFRLKQFVGDQRERGSLPTEDSALDYLLDKFKEYVRKPQV 61
            Y  D KLVF ++Q+ G+Q +RG   TED A+ YLL+K++EY RKPQ 
Sbjct:   37 YPPDRKLVFHVRQYAGEQADRGLGVTEDGAVAYLLNKYREYQRKPQA 83
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.71.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQZ0_ECTSI2.940e-1970.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZH15_9STRA1.320e-753.19Putative ribosome biogenesis ATPase RIX7 n=1 Tax=T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig74contigP-littoralis_Contig74:319069..329193 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig74.71.5mRNA_P-littoralis_Contig74.71.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig74 318857..329193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig74.71.5 ID=prot_P-littoralis_Contig74.71.5|Name=mRNA_P-littoralis_Contig74.71.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=73bp
GGGGGRGGGGSSNEYFVDTKLVFRLKQFVGDQRERGSLPTEDSALDYLLD
KFKEYVRKPQVSAHDWLCSCLG*
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