prot_P-littoralis_Contig726.31.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig726.31.1
Unique Nameprot_P-littoralis_Contig726.31.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length105
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig726.31.1 vs. uniprot
Match: A0A6H5KAW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW6_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.580e-13
Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 0 
Query:   12 TRRSTTLPWAQNPGACWTKFGTLKTEYTKGTQAQFDMGPQSEDDFESGKTSEDYMMKLLQYMWTQSTEYKTAAAQDLT 89
            T +   + +   P ACWTK+ T+K +YTK  Q  +D GPQ+  +FESG++SEDY  KL++ +W +S E K A A DLT
Sbjct:  193 TGKKPAVSFKDKPRACWTKWETIKRDYTKEIQIIYDEGPQTASEFESGQSSEDYAAKLIEEVWQRSDECKKAEAVDLT 270
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig726.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KAW6_9PHAE3.580e-1346.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig726contigP-littoralis_Contig726:136066..137598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig726.31.1mRNA_P-littoralis_Contig726.31.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig726 136066..137614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig726.31.1 ID=prot_P-littoralis_Contig726.31.1|Name=mRNA_P-littoralis_Contig726.31.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=105bp
MISICPYRWTSTRRSTTLPWAQNPGACWTKFGTLKTEYTKGTQAQFDMGP
QSEDDFESGKTSEDYMMKLLQYMWTQSTEYKTAAAQDLTGDESGGAATGA
GTTVV
back to top