prot_P-littoralis_Contig702.50.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig702.50.1
Unique Nameprot_P-littoralis_Contig702.50.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length260
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig702.50.1 vs. uniprot
Match: D7FPV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV9_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 2.240e-121
Identity = 217/259 (83.78%), Postives = 233/259 (89.96%), Query Frame = 0 
Query:    1 RGERLRKREEEREIKRANKRRKLGKKPLEVDKSGGHEGRVKKHANRRRLELARLERLVAKQEELLRDYRPPVHVTPLDPELKRKRRRRDFYDLDTSHWQLTGAARPADSLPGAGGTELVNERGDWEAGEDLFEKLGGVTNGSGXXXXXXXXXXXXXXXXXXXXXDADKEVKGENKKDRGTSGGGFYEGPEACREFLDLNHQLAQRLHEGGKESQTEEALERYQRSLQLDPVDHINARRGLVRLLLDAGDAAKARAIIDR 259
            RGERLRKRE ER  KRA KRRKLGKKPL VD+SGG+E + KKHAN+RRLELARLERLV+KQEELLRDYRPPVHV PLDPELKRKRRRRDFYDLDTSHW+LTGAARPADSLPGAGGTELVNER DWEAGEDLFEKL G ++   XXXXXXXXXXXXXXXXXXXXX    E +G  K +  TSGGGFYEGPEACRE+LDLNHQLAQRLH+GGKESQTEEAL+RYQRSL+LDPVDH+NARRGLVRLLLD GDA KARA+IDR
Sbjct:    3 RGERLRKREAERAEKRAKKRRKLGKKPLTVDRSGGYESQPKKHANKRRLELARLERLVSKQEELLRDYRPPVHVAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGAGGTELVNEREDWEAGEDLFEKLAGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRGRQKGE--TSGGGFYEGPEACREYLDLNHQLAQRLHDGGKESQTEEALKRYQRSLELDPVDHVNARRGLVRLLLDGGDADKARAVIDR 259
[Close]
BLAST of mRNA_P-littoralis_Contig702.50.1 vs. uniprot
Match: A0A835Z3Z8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z8_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.730e-19
Identity = 60/125 (48.00%), Postives = 79/125 (63.20%), Query Frame = 0 
Query:   13 EIKRANKRRKLGKKPLEVDKSGGHEGRVKKHANRRRLELARLERLVAKQEELLRDYRPPVHVTPLDPELKRKRRRRDFYDLDTSHWQLTGAARPADSLPGAGGTELVNERGDW-EAGEDLFEKLG 136
            ++K+A KR +  +    ++   GH+   +K   +R+LE++RL+R  AKQEELLR+Y PP   TP  PE +R+RRR+DFYDLDTS WQL GAARPA  +    G E  N    W E GEDLF   G
Sbjct:    3 QLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII----GAEPENPH--WQEQGEDLFALKG 121
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig702.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPV9_ECTSI2.240e-12183.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3Z8_9STRA4.730e-1948.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availablePFAMPF14559TPR_19coord: 212..259
e-value: 4.5E-6
score: 27.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..162
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 188..259
e-value: 6.0E-5
score: 25.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 122..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig702contigP-littoralis_Contig702:147617..149940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig702.50.1mRNA_P-littoralis_Contig702.50.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig702 147617..149940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig702.50.1 ID=prot_P-littoralis_Contig702.50.1|Name=mRNA_P-littoralis_Contig702.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=260bp
RGERLRKREEEREIKRANKRRKLGKKPLEVDKSGGHEGRVKKHANRRRLE
LARLERLVAKQEELLRDYRPPVHVTPLDPELKRKRRRRDFYDLDTSHWQL
TGAARPADSLPGAGGTELVNERGDWEAGEDLFEKLGGVTNGSGGGDSEED
SGVDDASDDDSSSSDADKEVKGENKKDRGTSGGGFYEGPEACREFLDLNH
QLAQRLHEGGKESQTEEALERYQRSLQLDPVDHINARRGLVRLLLDAGDA
AKARAIIDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf