prot_P-littoralis_Contig69.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig69.10.1
Unique Nameprot_P-littoralis_Contig69.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length342
Homology
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: D8LTQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ5_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 3.160e-129
Identity = 194/213 (91.08%), Postives = 197/213 (92.49%), Query Frame = 0
Query:    1 MSAFGMGFGGGPGGLGGMG------APRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDESLAASKA 207
            MSAFG+  GGGPG            APRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNP+QGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSV+FLEISNPRAVLETTMRHFSCLTEGDVICLPYNDR YELAVKELKPSNAVGIVETDLNVDFDAPVGYDESLAAS A
Sbjct:    1 MSAFGL--GGGPGXXXXXXXXXXXXAPRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPSQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVDFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRNYELAVKELKPSNAVGIVETDLNVDFDAPVGYDESLAASNA 211          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A836CM39_9STRA (Ubiquitin fusion degradation protein UFD1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM39_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.430e-95
Identity = 142/199 (71.36%), Postives = 163/199 (81.91%), Query Frame = 0
Query:    6 MGFGGGPGGLGGMGA--PRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDESL 202
            MG+GGG  G GG  A  P  FEEQYHCYPVSFQDKEHLE GDKILLPSSALD LAR  VEYPMLF ++N  +G  THCGVLEFSAPEGSCYIP WMM NLLLE G L+T+KNVSLPK  FVK QPQSV+FL+ISNPRAVLE  +RHFSC+T+GD +C+PYN R Y L ++E++P++A  I+ETD NVDFDAPVGY+E L
Sbjct:    8 MGYGGGYNGAGGARAAFPNHFEEQYHCYPVSFQDKEHLEDGDKILLPSSALDTLARLSVEYPMLFSITNEAEGKTTHCGVLEFSAPEGSCYIPFWMMSNLLLEPGGLITIKNVSLPKANFVKLQPQSVDFLDISNPRAVLERQLRHFSCVTKGDQLCIPYNARKYYLEIREVRPADAACIIETDCNVDFDAPVGYEEHL 206          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A7S2HLE7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLE7_9STRA)

HSP 1 Score: 278 bits (710), Expect = 3.310e-87
Identity = 130/195 (66.67%), Postives = 160/195 (82.05%), Query Frame = 0
Query:    6 MGFGGGPGGLGGMGAPRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE 200
             G+GG  GG GG+  P+ FEEQYHCY V++ D+ HLE GDKILLP SA D LAR QV+YPMLF+L +PT+G  THCGVLEF+A EGSCY+P WMMQNLL+E GS+LTV NVSLPK +FVK QPQ V+FLEI+NPRAVLE  +R+FSC+T+GDVIC+PYN++ Y+  +KE+KP +A  I+ETD NVDFDAP+GY E
Sbjct:    3 FGWGGYAGGRGGL--PQRFEEQYHCYSVAYADRGHLEKGDKILLPPSAFDTLARLQVDYPMLFQLQSPTKGTMTHCGVLEFTAEEGSCYVPFWMMQNLLIEEGSVLTVTNVSLPKASFVKLQPQHVDFLEITNPRAVLEHALRNFSCITKGDVICVPYNEKKYQFEIKEVKPQDAACIIETDCNVDFDAPLGYKE 195          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A7S2A2U1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2U1_TRICV)

HSP 1 Score: 273 bits (698), Expect = 1.520e-85
Identity = 125/187 (66.84%), Postives = 151/187 (80.75%), Query Frame = 0
Query:   14 GLGGMGAPRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE 200
            G GG G P+ FEEQYHCY V++ DK HLE GDKILLP SA D LAR QV+YPMLF L +P +G  THCGVLEF+A EGSCYIP W+MQNLL+E G+++T+ NVSLPK TFVK +PQ V+FLEI+NPRAVLE  +R+FSC+T+GDVIC+PYNDR Y   + E+KP +A  I+ETD NVDFDAPVGY +
Sbjct:    6 GFGGAGLPQRFEEQYHCYSVAYADKAHLEGGDKILLPPSAFDTLARLQVDYPMLFRLESPQKGTLTHCGVLEFTAEEGSCYIPFWVMQNLLIEEGAVITITNVSLPKATFVKLRPQHVDFLEITNPRAVLEHALRNFSCVTKGDVICVPYNDRNYHFELMEVKPQDAACIIETDCNVDFDAPVGYKD 192          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A7R9WXA3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WXA3_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.280e-84
Identity = 127/190 (66.84%), Postives = 154/190 (81.05%), Query Frame = 0
Query:   11 GPGGLGGMGAPRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE 200
            G GG+GG  + R FEEQYHCY V++ DK HLE GDKILLP SA D LAR QV+YPMLF L++ T  N THCGVLEF+A EG+CYIP WMMQNLL+E G+++TV NVSLPK TFVK QPQ V+FLEISNPRAVLE  +R+FSC+T+GDVI +PYN++ +  A+KE++P +A  I+ETD NVDFDAPVGY E
Sbjct:    9 GAGGMGGYRSSRRFEEQYHCYSVAYADKSHLEKGDKILLPPSAFDQLARLQVDYPMLFRLTSTTDTNMTHCGVLEFTAEEGTCYIPFWMMQNLLIEEGAVITVSNVSLPKATFVKLQPQHVDFLEISNPRAVLEHALRNFSCVTKGDVIQIPYNNKNFHFALKEVEPQDAACIIETDCNVDFDAPVGYQE 198          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A7S2V4N8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4N8_9STRA)

HSP 1 Score: 266 bits (681), Expect = 4.750e-84
Identity = 131/200 (65.50%), Postives = 158/200 (79.00%), Query Frame = 0
Query:    7 GFGGGPGGLGGMGA----PRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDESL 202
            GFGGG GG G MG     P+ FEE YHC  V FQDK HLE GDKILLP SALD LAR  +EYPMLFE+S+   G RTHCGVLEFSAPEGS YIP WMMQNL+LE G ++ +KNVSLPK ++VKF+PQS++FL+I+NPRAVLE  +R FSC+T+GD IC+PYN + Y L V E+KP++A  I+ETD NVDF+APVGY+E +
Sbjct:    4 GFGGGFGGPG-MGMQGSFPQSFEEHYHCNSVVFQDKGHLEDGDKILLPPSALDTLARLHIEYPMLFEVSSVEAGKRTHCGVLEFSAPEGSAYIPFWMMQNLMLEEGGMVLIKNVSLPKASYVKFKPQSMDFLDITNPRAVLERALRSFSCVTKGDTICIPYNSKKYYLEVCEVKPADAACIIETDCNVDFEAPVGYEEHI 202          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A7S4AUU4_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AUU4_9STRA)

HSP 1 Score: 268 bits (686), Expect = 8.600e-84
Identity = 134/202 (66.34%), Postives = 159/202 (78.71%), Query Frame = 0
Query:    1 MSAFGMGFGG-GPGGL-GGMGAPRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE 200
            MS FG G+GG G GG  GG GA R FEEQYHCY V++ DK HLE GDKILLP SA D LAR QV+YPMLF+LS+      TH GVLEF+A EG+CYIP WMMQNLL+E G+++TV N SLPK TFVK QPQSV+FLEISNPRAVLE  +R+FSC+T+GD+I LPYN++ Y   +KE++P +A  I+ETD NVDFDAPVGY E
Sbjct:    1 MSFFGGGYGGYGVGGXXGGYGANRRFEEQYHCYSVAYADKPHLEKGDKILLPPSAFDTLARLQVDYPMLFKLSSTVDNKTTHSGVLEFTAEEGTCYIPFWMMQNLLIEEGAVITVTNASLPKATFVKLQPQSVDFLEISNPRAVLEHALRNFSCVTKGDIIQLPYNNKNYHFELKEVEPQDAACIIETDCNVDFDAPVGYKE 202          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A0P0YV96_9STRA (Host ubiquitin fusion degradation n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV96_9STRA)

HSP 1 Score: 265 bits (677), Expect = 9.540e-83
Identity = 132/196 (67.35%), Postives = 156/196 (79.59%), Query Frame = 0
Query:    5 GMGFGGGPGGLGGMGAPRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE 200
            G GF GG  G GG G  R FEEQYHCY V++ DK HLE GDKILLP SA D LAR QV+YPMLF L++ T    THCGVLEF+A EG+CYIP WMMQNLL+E GS++TV NVSLPK +FVK QPQSV+FLEISNPRAVLE  +R+FSC+T+GDVI +PYN++ Y  A+KE++P +A  I+ETD NVDFDAPVGY E
Sbjct:    4 GWGFAGGGFG-GGFGNAR-FEEQYHCYSVAYADKSHLEKGDKILLPPSAFDTLARLQVDYPMLFRLTSGTDNRFTHCGVLEFTAEEGTCYIPFWMMQNLLIEEGSVITVTNVSLPKASFVKLQPQSVDFLEISNPRAVLEHALRNFSCVTKGDVIQIPYNNKNYHFALKEVQPQDAACIIETDCNVDFDAPVGYKE 197          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: B8BWC2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWC2_THAPS)

HSP 1 Score: 257 bits (656), Expect = 1.610e-82
Identity = 119/177 (67.23%), Postives = 141/177 (79.66%), Query Frame = 0
Query:   24 FEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE 200
            FEEQYHCY  ++ DK  LE GDKILLP SA D LAR QV+YPMLF+L +  +G  THCGVLEF+A EGSC IP WMMQNLL+E G++LTV NVSLPK  FVKFQ Q V+FLEISNPRAVLE  +R+FSC+T+GDVIC+PYN + Y   +KE++P +A  I+ETD NVDFDAPVGY E
Sbjct:    1 FEEQYHCYSAAYADKSQLEQGDKILLPPSAFDILARLQVDYPMLFQLQSGDKGTLTHCGVLEFTAEEGSCVIPFWMMQNLLIEEGAVLTVTNVSLPKANFVKFQAQHVDFLEISNPRAVLEHALRNFSCITKGDVICVPYNSKNYHFEIKEVRPQDAACIIETDCNVDFDAPVGYKE 177          
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Match: A0A7S3PZP6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZP6_9STRA)

HSP 1 Score: 265 bits (678), Expect = 2.050e-82
Identity = 122/180 (67.78%), Postives = 144/180 (80.00%), Query Frame = 0
Query:   21 PRGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE 200
            P  FEEQYHCY V++ DK H E GDKILLP SA D+LAR  +EYPMLF L +  +G  THCGVLEF+A EGSCYIP WMMQNLL+E GS++TV NVSLPK TFVK QPQ V+FLEI+NPRAVLE  +R++SC+T+GDVICLPYN + Y   +KE+KP +A  I+ETD NVDFDAPVGY E
Sbjct:   12 PNRFEEQYHCYSVAYADKSHHEGGDKILLPPSAFDSLARLDIEYPMLFRLESSDRGTSTHCGVLEFTAQEGSCYIPFWMMQNLLIEEGSVITVTNVSLPKATFVKLQPQHVDFLEITNPRAVLEHALRNYSCVTKGDVICLPYNSKNYHFELKEVKPKDAACIIETDCNVDFDAPVGYKE 191          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig69.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTQ5_ECTSI3.160e-12991.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CM39_9STRA1.430e-9571.36Ubiquitin fusion degradation protein UFD1-domain-c... [more]
A0A7S2HLE7_9STRA3.310e-8766.67Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2A2U1_TRICV1.520e-8566.84Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7R9WXA3_9STRA1.280e-8466.84Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2V4N8_9STRA4.750e-8465.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4AUU4_9STRA8.600e-8466.34Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A0P0YV96_9STRA9.540e-8367.35Host ubiquitin fusion degradation n=1 Tax=Nitzschi... [more]
B8BWC2_THAPS1.610e-8267.23Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S3PZP6_9STRA2.050e-8267.78Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042299Ufd1-like, Nn domainGENE3D2.40.40.50coord: 16..118
e-value: 1.3E-41
score: 142.5
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 24..195
e-value: 7.3E-75
score: 250.2
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 20..246
NoneNo IPR availableGENE3D3.10.330.10coord: 120..194
e-value: 3.4E-32
score: 112.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..341
NoneNo IPR availablePANTHERPTHR12555:SF13UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1coord: 20..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig69contigP-littoralis_Contig69:51770..61001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig69.10.1mRNA_P-littoralis_Contig69.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig69 51538..62247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig69.10.1 ID=prot_P-littoralis_Contig69.10.1|Name=mRNA_P-littoralis_Contig69.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=342bp
MSAFGMGFGGGPGGLGGMGAPRGFEEQYHCYPVSFQDKEHLEAGDKILLP
SSALDALARQQVEYPMLFELSNPTQGNRTHCGVLEFSAPEGSCYIPHWMM
QNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVEFLEISNPRAVLETTMRHF
SCLTEGDVICLPYNDRTYELAVKELKPSNAVGIVETDLNVDFDAPVGYDE
SLAASKAAAAAAAGSGGGGAAGRLGRLVVGRSIYRPRHQGKHRRLPTKHR
SLCPLRGAGPGSTERKRPLRARRRRRARRATVPAENRRQQRRQKPEQRQQ
LVAQEELVYQPEPRWVSRHPRGNGPSRKSFRLAHSKGLETS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042299Ufd1-like_Nn
IPR004854Ufd1-like