prot_P-littoralis_Contig683.11.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig683.11.2
Unique Nameprot_P-littoralis_Contig683.11.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length528
Homology
BLAST of mRNA_P-littoralis_Contig683.11.2 vs. uniprot
Match: D8LME0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME0_ECTSI)

HSP 1 Score: 639 bits (1649), Expect = 1.990e-223
Identity = 318/383 (83.03%), Postives = 338/383 (88.25%), Query Frame = 0
Query:    1 MTRAWAASDFDEALQSVEQIIVTPDGSKLITLGSRGLGTGTFGVFSISADGDLELLQEDDHRGIIRAAFPASSSRDLYAIDDDRSVLTHYTYDSGSYVVSQQTIGGFTCLYGLGVPPDGLNVYVTDDCLYTVTNFKRDPDSGSLTFQDELIGDTRNGDGLGCLKSLSYTTDGIWAVGLDSCDDVISILKRDLETGTLTPTALIGTSNPNGNAINVDKAWGALVVSDGSGDIYVADWSDRNIFWVRADFGVGGDGSVISSHWFSLDFKPSTLVISPDLQTVFAANKENTVWEGGAYARVAVAVPDSEESAGAAVNVTLAVXXXXXXVAAIVVAGVAAKHVQRKRNIGRYADEEETLRAALDANPNDAVAHNNLGYLMETVYKDY 383
            MTRAWAASDFDEALQSVEQI+VTPDGSKLITLGSRGLG GTFGVFSISADGDL+LLQEDDHRGIIRA FP SSSRDLYAIDDDRSVLTHYTYD   +VVSQ T+GGFTCLYGLGV PDG NVYV DDCLYTVTNF+RDPD+GSLTFQDEL GD RNGDGLGCLKSLS+T DG W VGLDSCDDVISILKRDL+TGTLTPT LI T NP+GN IN+DK W ALVVSDG GDIYVADWSD  I WVRADFGVGGDGSVIS++WFSL FKPSTL+ SPDLQTV+ ANKEN VWEGGAY RVAV  PDS+ S  +AVNVTLAV      VAAIV+AGVAAK +QRKRNI  YA EEETLRAAL+ANPNDAVAHNNLGYLMETVYKD+
Sbjct:  100 MTRAWAASDFDEALQSVEQIVVTPDGSKLITLGSRGLGRGTFGVFSISADGDLQLLQEDDHRGIIRAGFPDSSSRDLYAIDDDRSVLTHYTYDGSRFVVSQ-TVGGFTCLYGLGVAPDGANVYVADDCLYTVTNFRRDPDTGSLTFQDELSGDPRNGDGLGCLKSLSFTEDGAWVVGLDSCDDVISILKRDLDTGTLTPTTLINTDNPDGNTINIDKTWSALVVSDGLGDIYVADWSDSKILWVRADFGVGGDGSVISTNWFSLSFKPSTLIASPDLQTVYVANKENDVWEGGAYPRVAVPTPDSDGSGTSAVNVTLAVALSVSLVAAIVIAGVAAKFIQRKRNISMYAGEEETLRAALEANPNDAVAHNNLGYLMETVYKDF 481          
BLAST of mRNA_P-littoralis_Contig683.11.2 vs. uniprot
Match: A0A835ZFA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA9_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.800e-25
Identity = 104/401 (25.94%), Postives = 173/401 (43.14%), Query Frame = 0
Query:    3 RAWAASDFDEALQSVEQIIVTPDGSKLITLGSRGLGTGTFGVFSISADGDLELLQEDDHRGIIRAAFPASSSRDLYAIDDDRSVLTHYTYDSGSYVVS-QQTIGGFTCLYG-----LGVPPDGLNVYVTDDCLYTVTNFKRDPDSGSL--TFQDELIGDTR--NGDGLGCLKSLSYTTDGIWAVGLDSCDDVISILKRDLETGTLTPTALIGTSNPNGNAINVDKAWGALVVSDGSGDIYVADWSDRNIFWVRADFGVGGDGSVISSHWFSLDFKPSTLVISPDLQTVFAA-NKENTV---------WEGGAYARVAVAVPDSEESAGAAVNVTLAVXXXXXXVAAIVVAGVAAKHVQRKRNIGRYADEEETLRAALDANPNDAVAHNNLGYLMETVYKDY 383
            + W AS F  AL++V+ + ++ D   ++  G++    G+ G+FS+  DG   LL +++   I  A F   S+ D Y ID     L  ++Y S  +  S QQ I     L G     L + PDGLNVYV D       NF RDP +G +  +    L GD      DG+G   S+++++   +A  L++    +++L R +  G L   +    +  +G A+        L+ SD   D+YV   S   I W++ D       ++ ++ WF    +P  L+     + V+A     NT          W+G  + R     P    +     + T         +            +   +++     EEE    AL A+PNDA+AHNN G+ ++    +Y
Sbjct:   93 QGWPASAFTTALKAVQHVSISEDDGYMVICGNKADPYGSLGIFSLDVDGTPSLLYQEEIPDIQHALFAPGSATDFYTIDQTNMELRLWSYSSADHGFSVQQAIA----LEGPSPDALAISPDGLNVYVHDSSSAKNFNFARDPATGLVGESPASTLQGDPNAVGSDGIGHWSSMAFSSSAPFAFALETLVGQVTVLSRAVGNGALAVLSKFPVAYDDGAAVACRADAPLLLASDDDVDLYVLGESRGQIGWLQFD---AATHALHANGWFVTGSRPRQLIADAAYEHVYATFAATNTXXXXXXXXXKWKGAHFNREPAVPPTPAPTTPQPTSATTYSVESQTLLLGESADTFNLMLIAVHKSVELAQAEEEKFILALQASPNDALAHNNYGHFLQHKRSNY 486          
BLAST of mRNA_P-littoralis_Contig683.11.2 vs. uniprot
Match: A0A3B9HEV5_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3B9HEV5_9CHLR)

HSP 1 Score: 72.4 bits (176), Expect = 1.250e-9
Identity = 75/255 (29.41%), Postives = 114/255 (44.71%), Query Frame = 0
Query:   12 EALQSVEQIIVTPDGSKLITLGSRGLGTGTFGVFSISA-DGDLELLQE--DDHRGI--IRAAFPASSSRD---------------LYAIDDDRSVLTHYTYDSGSYVVSQQTIGGFTCLYG---LGVPPDGLNVYVTDDCLYTVTNFKRDPDSGSLTFQDELIGDTRNGDGLGCLKSLSYTTDGIWAVGLDSCDDVISILKRDLETGTLTPTALIGTSNPNGNAINVDKAWGALVVSDGSGD--IYVADWSDRNI 241
            E L  V  I ++P GS L T    G      GVFSI+   G L  ++   +   G+  I+ A   + S D                ++IDD   +L +       Y+ ++Q   G T L+    L V PDG ++Y+T     ++T FKR+P +GSL+    L  +T   DGL    SL  T+DG   V   + DD+I++ +R+  TG+ T              + VD   GA  V+  + D  +YVA   D N+
Sbjct:  244 EGLDGVRDIRISPSGSHLYT---AGFEDNAIGVFSINGTSGQLSFIRSYVNGLNGVHGIQGATAIAISPDGKHLYCAGWKGNSVAAFSIDDTTGLLNYL-----GYISNEQH--GITSLWSPSDLEVTPDGKHLYITAATSDSLTAFKREPSTGSLSLIGFLKDNTNGIDGLDWASSLEITSDGKHIVVTAAIDDMITVFRRNPSTGSFTLRGYFKDGQ-----LGVDGLEGAYSVNISADDSSVYVAG-KDENM 482          
BLAST of mRNA_P-littoralis_Contig683.11.2 vs. uniprot
Match: A0A5N9ATB2_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A5N9ATB2_9CHLR)

HSP 1 Score: 72.4 bits (176), Expect = 1.350e-9
Identity = 75/255 (29.41%), Postives = 114/255 (44.71%), Query Frame = 0
Query:   12 EALQSVEQIIVTPDGSKLITLGSRGLGTGTFGVFSISA-DGDLELLQE--DDHRGI--IRAAFPASSSRD---------------LYAIDDDRSVLTHYTYDSGSYVVSQQTIGGFTCLYG---LGVPPDGLNVYVTDDCLYTVTNFKRDPDSGSLTFQDELIGDTRNGDGLGCLKSLSYTTDGIWAVGLDSCDDVISILKRDLETGTLTPTALIGTSNPNGNAINVDKAWGALVVSDGSGD--IYVADWSDRNI 241
            E L  V  I ++P GS L T    G      GVFSI+   G L  ++   +   G+  I+ A   + S D                ++IDD   +L +       Y+ ++Q   G T L+    L V PDG ++Y+T     ++T FKR+P +GSL+    L  +T   DGL    SL  T+DG   V   + DD+I++ +R+  TG+ T              + VD   GA  V+  + D  +YVA   D N+
Sbjct:  548 EGLDGVRDIRISPSGSHLYT---AGFEDNAIGVFSINGTSGQLSFIRSYVNGLNGVHGIQGATAIAISPDGKHLYCAGWKGNSVAAFSIDDTTGLLNYL-----GYISNEQH--GITSLWSPSDLEVTPDGKHLYITAATSDSLTAFKREPSTGSLSLIGFLKDNTNGIDGLDWASSLEITSDGKHIVVTAAIDDMITVFRRNPSTGSFTLRGYFKDGQ-----LGVDGLEGAYSVNISADDSSVYVAG-KDENM 786          
BLAST of mRNA_P-littoralis_Contig683.11.2 vs. uniprot
Match: A0A382UKF5_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382UKF5_9ZZZZ)

HSP 1 Score: 68.9 bits (167), Expect = 3.370e-9
Identity = 75/248 (30.24%), Postives = 108/248 (43.55%), Query Frame = 0
Query:   12 EALQSVEQIIVTPDGSKLITLGSRGLGTGTFGVFSISA-DGDLELLQE-----DDHRGIIRAAFPASS--------------SRDLYAIDDDRSVLTHYTYDSGSYVVSQQTIGGFTCLYG---LGVPPDGLNVYVTDDCLYTVTNFKRDPDSGSLTFQDELIGDTRNGDGLGCLKSLSYTTDGIWAVGLDSCDDVISILKRDLETGTLTPTALIGTSNPNGNAINVDKAWGALVVSDGSGD--IYVA 234
            E L  V  I ++P GS L T           GVFS++A  G L  +       D   GI  A   A S              S   ++IDD   +LT+       YV ++Q   G T L+    L V PDG ++YVT     ++T F+RD  +GSL+    L  +T   DGL    SL   +DG   V   + D+ +++ KR+  TG++T        N     + VD   GA  V+  + D  +YVA
Sbjct:   30 EGLDDVRDIRLSPSGSHLYT---AAFEENAIGVFSVNATSGQLSFIGSHINGLDGVHGIQGATAIAISPDGQHLYCAGWKGNSIAAFSIDDATGLLTYL-----GYVSNEQY--GVTSLWSPSDLEVTPDGKHLYVTAATSDSLTVFRRDSSTGSLSLIGFLKDNTNGIDGLDWASSLEIMSDGQHIVVTAAVDNTVTVFKRNSSTGSITLRGYFKDGN-----LGVDGLEGAYSVNISADDSLVYVA 262          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig683.11.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LME0_ECTSI1.990e-22383.03TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZFA9_9STRA1.800e-2525.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3B9HEV5_9CHLR1.250e-929.41Uncharacterized protein (Fragment) n=1 Tax=Dehaloc... [more]
A0A5N9ATB2_9CHLR1.350e-929.41Uncharacterized protein (Fragment) n=1 Tax=SAR202 ... [more]
A0A382UKF5_9ZZZZ3.370e-930.24Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 436..468
e-value: 60.0
score: 6.9
coord: 401..433
e-value: 27.0
score: 9.9
coord: 471..503
e-value: 14.0
score: 12.4
coord: 366..398
e-value: 22.0
score: 10.8
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 401..435
e-value: 20.0
score: 12.3
coord: 436..470
e-value: 0.2
score: 20.8
coord: 366..400
e-value: 7.8
score: 15.4
coord: 471..505
e-value: 7.2
score: 15.6
NoneNo IPR availablePFAMPF13432TPR_16coord: 382..429
e-value: 6.0E-5
score: 23.5
coord: 451..504
e-value: 1.5E-5
score: 25.5
NoneNo IPR availablePANTHERPTHR44216PROTEIN O-MANNOSYL-TRANSFERASE TMTC2coord: 344..420
coord: 381..517
NoneNo IPR availableSUPERFAMILY63829Calcium-dependent phosphotriesterasecoord: 14..289
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 331..407
e-value: 1.0E-11
score: 46.6
coord: 449..521
e-value: 2.0E-13
score: 52.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 408..448
e-value: 2.8E-7
score: 32.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 345..511
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 17..209
e-value: 2.5E-8
score: 35.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig683contigP-littoralis_Contig683:88865..110318 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig683.11.2mRNA_P-littoralis_Contig683.11.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig683 88064..112703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig683.11.2 ID=prot_P-littoralis_Contig683.11.2|Name=mRNA_P-littoralis_Contig683.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=528bp
MTRAWAASDFDEALQSVEQIIVTPDGSKLITLGSRGLGTGTFGVFSISAD
GDLELLQEDDHRGIIRAAFPASSSRDLYAIDDDRSVLTHYTYDSGSYVVS
QQTIGGFTCLYGLGVPPDGLNVYVTDDCLYTVTNFKRDPDSGSLTFQDEL
IGDTRNGDGLGCLKSLSYTTDGIWAVGLDSCDDVISILKRDLETGTLTPT
ALIGTSNPNGNAINVDKAWGALVVSDGSGDIYVADWSDRNIFWVRADFGV
GGDGSVISSHWFSLDFKPSTLVISPDLQTVFAANKENTVWEGGAYARVAV
AVPDSEESAGAAVNVTLAVALSLALVAAIVVAGVAAKHVQRKRNIGRYAD
EEETLRAALDANPNDAVAHNNLGYLMETVYKDYAEAEAHYTEALRINPRA
AFAHNSLGHLLHHRQKNYDAAEEHYLKAISLHWRSPDAHYNLGCLLQHHK
NDLAEAEKQYRHAIKCDPKHGMAQYNLGWVLEKVKEDLAGAERCYRAAIE
ADPEDKDAARRLAKVVAQMQAGQEEKH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf