prot_P-littoralis_Contig68.63.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig68.63.1
Unique Nameprot_P-littoralis_Contig68.63.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length243
Homology
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: D7FY73_ECTSI (Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY73_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.930e-30
Identity = 79/174 (45.40%), Postives = 100/174 (57.47%), Query Frame = 0
Query:    1 MWTNVPFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTLPALEASALPP---LPDDDEVLSSTKSVTEKRRDRHG--AQPRSSTSRTG-DAGASGAXXXXXXXXXXXXXXXXXTRGGADGTRAGGG------GAQGKGRRGGHTKFRFPFLACMGMFGRKEKSTPPQHAAVC 162
            MW+++PFP+RQVEVNRSLSDRFPTSWSVHRGHHFFLW+K LP+LE +  P      +D EVL++T  V+++RRDR G   QP  S   +G D    G                   R G+ G   GG       G +GKGRRG H KFR PF++C+G+  R    + P     C
Sbjct:  500 MWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTAT-GVSDRRRDRQGHPLQPLCSRGISGVDVSGGGGRSDSL-------------RSGSSGFSLGGAFSGVGLGTEGKGRRGRHPKFRLPFMSCLGLGRRTPSRSSPSALRSC 659          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A6H5KB73_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB73_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.940e-28
Identity = 79/174 (45.40%), Postives = 100/174 (57.47%), Query Frame = 0
Query:    1 MWTNVPFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTLPALEASALPP---LPDDDEVLSSTKSVTEKRRDRHG--AQPRSSTSRTG-DAGASGAXXXXXXXXXXXXXXXXXTRGGADGTRAGGG------GAQGKGRRGGHTKFRFPFLACMGMFGRKEKSTPPQHAAVC 162
            MW+++PFP+RQVEVNRSLSDRFPTSWSVHRGHHFFLW+K LP+LE +  P      +D EVL++T  V+++RRDR G   QP  S   +G D    G                   R G+ G   GG       G +GKGRR  H KFR PF++C+G+ GR+  S        C
Sbjct:  489 MWSSLPFPYRQVEVNRSLSDRFPTSWSVHRGHHFFLWHKILPSLEGALQPQQSATSEDGEVLTAT-GVSDRRRDRQGHPLQPFCSKGISGVDVNGVGGRSDSL-------------RSGSSGFSLGGSFFGVGLGGEGKGRRVRHPKFRLPFMSCLGL-GRRTPSASSSARQSC 647          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A7S4DH00_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH00_HETAK)

HSP 1 Score: 72.8 bits (177), Expect = 3.700e-11
Identity = 32/47 (68.09%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MWTNVPFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTLPALEAS 47
            MW   PFPFRQ+  N  LSDRFPTSWSV RGHHFFLW K  P+L  S
Sbjct:  385 MWEYPPFPFRQLPGNLPLSDRFPTSWSVQRGHHFFLWAKGAPSLGIS 431          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A7S3ZW16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW16_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.350e-9
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    6 PFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTL 41
            PFPFRQ+E NRS +DR+PTSWSV RGHH FLW K L
Sbjct:  341 PFPFRQLEANRSFADRYPTSWSVQRGHHLFLWVKVL 376          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A8J2WX67_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX67_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.700e-9
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    6 PFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTL 41
            PFPFRQ+E NRS +DR+PTSWSV RGHH FLW K L
Sbjct:  361 PFPFRQLEANRSFADRYPTSWSVQRGHHLFLWVKVL 396          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A7S3NGR3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGR3_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.030e-9
Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    6 PFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTL 41
            PFPFRQ+E NRS +DR+PTSWSV+RGHH FLW K L
Sbjct:  360 PFPFRQLESNRSFADRYPTSWSVNRGHHLFLWVKVL 395          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A4D9D5D5_9STRA (C2H2-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5D5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.970e-9
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 0
Query:    7 FPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTL 41
            FPFRQ+E+NRS+SDR+ TSWSV+RGHHF+LW K L
Sbjct:  429 FPFRQLEINRSVSDRYATSWSVNRGHHFYLWMKVL 463          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A7S0SP71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SP71_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.490e-8
Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 MWT--NVPFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTLPAL---EASALPPLPDDDEVLSSTKSVTEK 68
            +W+  ++ F F+Q+E N+ LSDRFPTSWSV RGHHFFLW K+       + S L  L DD    +S KS + K
Sbjct:  420 LWSIASLNFQFKQLECNKYLSDRFPTSWSVQRGHHFFLWIKSNSYSINNDVSKLSYLSDDSSNENSIKSNSNK 492          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A7S2SB25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB25_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.570e-8
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0
Query:    1 MWTNVPFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTLPAL 44
            +W     PF Q+E+N+S  DRFPTSWSV RGHHF++W K   A+
Sbjct:  472 LWDVTAMPFSQLEINKSSMDRFPTSWSVQRGHHFYVWTKNCSAV 515          
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Match: A0A6U4GL22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GL22_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 8.550e-7
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 0
Query:    1 MWTNVPFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLW 37
            MW +  +PF Q   NR L+DR+PTSWSV RGHHF+LW
Sbjct:  373 MWDSDDYPFVQHRENRDLTDRYPTSWSVSRGHHFYLW 409          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.63.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FY73_ECTSI2.930e-3045.40Topoisomerase 6 subunit B n=1 Tax=Ectocarpus silic... [more]
A0A6H5KB73_9PHAE2.940e-2845.40DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S4DH00_HETAK3.700e-1168.09Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3ZW16_9STRA1.350e-975.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2WX67_9STRA1.700e-975.00Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3NGR3_9STRA2.030e-975.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A4D9D5D5_9STRA3.970e-974.29C2H2-type domain-containing protein n=2 Tax=Monodo... [more]
A0A7S0SP71_9STRA3.490e-847.95Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S2SB25_9STRA4.570e-854.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U4GL22_9STRA8.550e-762.16Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig68contigP-littoralis_Contig68:374975..381302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig68.63.1mRNA_P-littoralis_Contig68.63.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig68 371741..385041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig68.63.1 ID=prot_P-littoralis_Contig68.63.1|Name=mRNA_P-littoralis_Contig68.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=243bp
MWTNVPFPFRQVEVNRSLSDRFPTSWSVHRGHHFFLWNKTLPALEASALP
PLPDDDEVLSSTKSVTEKRRDRHGAQPRSSTSRTGDAGASGAGVGGGCGR
SDSSSNSSSTRGGADGTRAGGGGAQGKGRRGGHTKFRFPFLACMGMFGRK
EKSTPPQHAAVCANELEPADTTIEMAEATTAAEAAPGEGGDAIRNTRSSR
EPCLEAGSGTGGSSSGGGNNNNNNNNKDPPKTARLDAVDPRS*
back to top