prot_P-littoralis_Contig672.26.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig672.26.4
Unique Nameprot_P-littoralis_Contig672.26.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length646
Homology
BLAST of mRNA_P-littoralis_Contig672.26.4 vs. uniprot
Match: D7G0T9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0T9_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 4.300e-121
Identity = 238/401 (59.35%), Postives = 275/401 (68.58%), Query Frame = 0
Query:    1 MDADGTCLVVSPCNQCKINKNGVQSCITRKHNARLTAVKRKDLASRHRQCVKPDQTMTIFKLVDRDSGEESVEFAPDMVFQRSCSSCAHLKTCILGGHELTDWVPEEGRGRIQQNKRKSGSSDTTDMPPIAP-----------EQQPSNKARKVSGG-TNPSITIPGPALKAAXXXXXXXXXXXXXXXXGEGGAASKAE-GRPKRRSSKGRRASAPEACEQAPPCPAAAAAXXXXPSXADPNAAESAAGTNAEAGLVDDTGDGGASA--------------APPQSIASQLDALAAQEDLLLQHYQADMQRFDEAKASRESEILVARDELESIKATREATKSMVADQRKNLVAERDRLTRLRCQEVIREEAEHRQKKNVLWSAVEPTAVAEVTGANDSGSG 374
            MD DGTCLVVSPCN C+INKNGVQ+CI RKHNARLTAVKR +LA+RHRQCVKPDQTMTIFKLVDR++GEESVE++PDM+FQR C+SC HLKTCILGGHELTDW PE GRGR  QNKRKS S+    +  ++P           +QQPS+K RKV+ G   PSITIPGPALKAA                 EG   +  E GR  R SSKGR+ SAPEA E+A P PAAAA     P   +  AA  A  T+ +  + D       +               AP QSIASQLDALAAQEDLLLQ ++ADM+  DEAKASRE EI VA+  LE IKATRE TKS  A+QRK +VAERDRLT LRCQE++REEAEHRQKK+ +WSAVEP A+A  T   +  SG
Sbjct:    1 MDVDGTCLVVSPCNNCRINKNGVQACIMRKHNARLTAVKRDELAARHRQCVKPDQTMTIFKLVDRNTGEESVEYSPDMIFQRPCASCIHLKTCILGGHELTDWTPEGGRGRASQNKRKSASTLEKALELLSPPAGEQQQHQHKQQQPSSKTRKVTDGYPKPSITIPGPALKAARKS--------------EGATTAPEELGRSTRWSSKGRKVSAPEAFEEAVPSPAAAA-----PPEDEFCAAADAVDTDEDVDVNDHACVSNGAVXXXXXXXXXXXXXGAPQQSIASQLDALAAQEDLLLQQFRADMRHLDEAKASREKEIRVAQAALEKIKATRETTKSNTAEQRKRMVAERDRLTHLRCQEMMREEAEHRQKKDDMWSAVEP-AMATATLPTEEASG 381          
BLAST of mRNA_P-littoralis_Contig672.26.4 vs. uniprot
Match: D7G0U1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U1_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 3.060e-24
Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = 0
Query:    1 MDADGTCLVVSPCNQCKINKNGVQSCITRKHNARLTAVKRKDLASRHRQCVKPDQTMTIFKLVDRDSGEESVEFAPDMVFQRSCSSCAHLKTCILGGHELTDWVPEEGRGRI 112
            MD DG  L++  CN C  NK   + C++R+HN R++ V+  +L   HRQCVKPDQ +TI+KL D ++ E+ +EF   ++FQ +C  C ++K+C+  GH+L DW P    GR+
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTYSHRQCVKPDQAITIYKLHDHETNEDYLEFDEKIIFQTACRMCLNIKSCLREGHKLIDWRPTFAGGRV 112          
BLAST of mRNA_P-littoralis_Contig672.26.4 vs. uniprot
Match: A0A6H5LER2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LER2_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 9.640e-18
Identity = 54/171 (31.58%), Postives = 93/171 (54.39%), Query Frame = 0
Query:    1 MDADGTCLVVSPCNQCKINKNGVQSCITRKHNARLTAVKRKDLASRHRQCVKPDQTMTIFKLVDRDSGEESVEFAPDMVFQRSCSSCAHLKTCILGGHELTDWVPEEG---------RGRIQQNKRKSGSSDTTDMPPIAPE--QQPSNKARKVSGGTNPS-ITIPGPALK 159
            MD DG  L++  CN C  NK   + C++R+HN R++ V+  +L + HRQCVKPDQ +TI+KL D ++ E+ +EF  +++FQ +C  C ++K+C+  G   +    + G         RGR +    K G     ++   + E  ++P  +  K     NP+ +T+   A++
Sbjct:    1 MDQDGLFLMLKMCNGCSHNKGSWKKCMSRRHNPRMSTVREDELTNSHRQCVKPDQAITIYKLHDHETNEDYLEFDEEIIFQTACRMCLNIKSCLRLGKVFSATFGKGGKSAGPLKGGRGRRRSAPEKLGDIHEMEIETDSSEVCERPHKRRGKAGTPANPAAVTLSPKAMR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig672.26.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0T9_ECTSI4.300e-12159.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G0U1_ECTSI3.060e-2442.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LER2_9PHAE9.640e-1831.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 624..644
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 519..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..646
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..640
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig672contigP-littoralis_Contig672:137628..143162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig672.26.4mRNA_P-littoralis_Contig672.26.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig672 137628..143225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig672.26.4 ID=prot_P-littoralis_Contig672.26.4|Name=mRNA_P-littoralis_Contig672.26.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=646bp
MDADGTCLVVSPCNQCKINKNGVQSCITRKHNARLTAVKRKDLASRHRQC
VKPDQTMTIFKLVDRDSGEESVEFAPDMVFQRSCSSCAHLKTCILGGHEL
TDWVPEEGRGRIQQNKRKSGSSDTTDMPPIAPEQQPSNKARKVSGGTNPS
ITIPGPALKAAAAAMAAATALPYPAPKGEGGAASKAEGRPKRRSSKGRRA
SAPEACEQAPPCPAAAAAAAAAPSAADPNAAESAAGTNAEAGLVDDTGDG
GASAAPPQSIASQLDALAAQEDLLLQHYQADMQRFDEAKASRESEILVAR
DELESIKATREATKSMVADQRKNLVAERDRLTRLRCQEVIREEAEHRQKK
NVLWSAVEPTAVAEVTGANDSGSGDASETITTQLSLAVHTGLGVVARPSP
ATAASREAETSAVLTALSQPLSVSSQLGGSSPPPSPSTTQLGSGNEKLAA
GAGGMGSGSGGGEQLLVGHREGSPNSWRLRGGEEAINGVRTPEANGVPVR
GDIQAAEIAPSPAMEDGEEPRSSVAEEETAVKGRGEDADGHESCHANAGA
VGLGGSNGTDVTAKGEGVVEEDEGASSASVGATPTKPVDAPEVDVVEAAA
PAGVSALQQESTAQEEGADSSMEVDEIEEEGEEEGEEEEEQQQQKE
back to top