prot_P-littoralis_Contig672.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig672.12.1
Unique Nameprot_P-littoralis_Contig672.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length220
Homology
BLAST of mRNA_P-littoralis_Contig672.12.1 vs. uniprot
Match: A0A6H5KCK7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK7_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 2.600e-51
Identity = 103/217 (47.47%), Postives = 133/217 (61.29%), Query Frame = 0
Query:    2 QPEMRKEYCQFMGGVDTADQQNGAHAHDHKACNNHWRRVIDKKIEQSKTNGFLCFRKWGSELKSEAEGRVESGEGETAANEKLGRAIVELDRLAKLERADWDTVLARELQARCNVGSTHAGGRRAQAKAKAKPSTEEGRVWGSVRVKAARYCMNPDCSKRSQNGCSCAECTAG---GAQGTLMCRACFMDAASHTAAAVARVQGAK-GTRRRKDMGW 214
            QP MRK+Y   MGGV+TADQQN +H HDHK+  NHWRRVI+ K E+  TN  + F+K+ S L+ +A  R++ G  E    EKL R +VEL RLAK+ERA WD +L+ EL ARCNVG  + GGR A        +    +VWGS+ VK  R CM+P C  ++  GC+CAE   G   G +G LMC+ACF +   H  A  A+    K G   RKD+ W
Sbjct:  202 QPWMRKDYVANMGGVETADQQNVSHTHDHKSYTNHWRRVIEGKFERRFTNIVVMFKKYVSLLEDQANKRIKGGGLELEVVEKLDRVLVELGRLAKMERAVWDEMLSTELMARCNVGRPNKGGRPAAV------TGAPDKVWGSISVKTQRKCMHPGCKSKTSKGCACAELCVGKQAGDRGVLMCQACFNNPVKHARAGDAQRNPQKYGVVGRKDLVW 412          
BLAST of mRNA_P-littoralis_Contig672.12.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.300e-48
Identity = 102/217 (47.00%), Postives = 136/217 (62.67%), Query Frame = 0
Query:    2 QPEMRKEYCQFMGGVDTADQQNGAHAHDHKACNNHWRRVIDKKIEQSKTNGFLCFRKWGSELKSEAEGRVESGEGETAANEKLGRAIVELDRLAKLERADWDTVLARELQARCNVGSTHAGGRRAQAKAKAKPSTEEGRVWGSVRVKAARYCMNPDCSKRSQNGCSCAECTAG---GAQGTLMCRACFMDAASHTAAAVARVQGAK-GTRRRKDMGW 214
            QP MRK+Y   MGGV+TAD+QNG+H HDH++  NHWR V++ K +Q+ TN F+ F+K+ S L+ +A  R+E G  E    EKL R +VEL RLAK+ERA WD +L+ EL ARCNVG  + GGR A+       +    +VWGS+ VK  R CM+P C  ++  GC+CAE   G   G +G LMC+ACF +   H  A  A+    K G   RKD+ W
Sbjct:  977 QPWMRKDYVANMGGVNTADRQNGSHTHDHESYTNHWRGVMEGKFKQTFTNIFVMFKKYVSLLEGQANKRIEGGGVELEVVEKLDRLLVELGRLAKMERAVWDEMLSTELMARCNVGRPNNGGRPAEV------TGAPDKVWGSISVKTQRKCMHPGCKSKTWKGCACAELCVGKQAGDRGVLMCQACFNNPVRHGRAGDAQRNPQKYGVVGRKDLVW 1187          
BLAST of mRNA_P-littoralis_Contig672.12.1 vs. uniprot
Match: A0A6H5JMI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI2_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 5.860e-26
Identity = 60/134 (44.78%), Postives = 82/134 (61.19%), Query Frame = 0
Query:   41 IDKKIEQSKTNGFLCFRKWGSELKSEAEGRVESGEGETAANEKLGRAIVELDRLAKLERADWDTVLARELQARCNVGSTHAGGRRAQAKAKAKPSTEEGRVWGSVRVKAARYCMNPDCSKRSQNGCSCAECTAG 174
            ++ K EQ+ TN F+ F+K+ S L+ +A  R++ G  E    EKL R +VEL RLAK+ERA WD +L+ EL ARCNVG  + GGR A        +    +VWGS+ VK  R CM+P C  ++  GC+CAE   G
Sbjct:    1 MEGKFEQTFTNIFVMFKKYVSLLEDQANKRIKGGGLELEVVEKLDRVLVELGRLAKMERAVWDEMLSTELMARCNVGRPNKGGRPAAV------TGAPDKVWGSISVKTQRKCMHPGCKSKTSKGCACAELCVG 128          
BLAST of mRNA_P-littoralis_Contig672.12.1 vs. uniprot
Match: A0A6H5KIY7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY7_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 4.020e-24
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    2 QPEMRKEYCQFMGGVDTADQQNGAHAHDHKACNNHWRRVIDKKIEQSKTNGFLCFRKWGSELKSEAEGRVESGEGETAANEKLGRAIVELDRLAKLERADW 102
            QP MRK+Y   +GGVDTADQQNG+HAHDH+AC N+WRRV++ KIE++ TN F+ F+ + + L+ EA+ R+E  + E   + KL   + EL RLA LER+ W
Sbjct:  120 QPWMRKDYVANIGGVDTADQQNGSHAHDHEACTNYWRRVMEAKIEETFTNIFVMFKAFVTFLEDEAKDRLEGVDLELDVSMKLEGVVDELARLANLERSAW 220          
BLAST of mRNA_P-littoralis_Contig672.12.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 4.600e-15
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    2 QPEMRKEYCQFMGGVDTADQQNGAHAHDHKACNNHWRRVIDKKIEQSKTNGFLCFRKWG 60
            QP MRK+Y   MGGVDTADQQNG+H HDHK+  NHWRRV++ K EQ+ TN F+ F+K G
Sbjct: 1031 QPWMRKDYVANMGGVDTADQQNGSHTHDHKSYTNHWRRVMEGKFEQTFTNIFVMFKKLG 1089          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig672.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KCK7_9PHAE2.600e-5147.47DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5JJP9_9PHAE1.300e-4847.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMI2_9PHAE5.860e-2644.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY7_9PHAE4.020e-2452.48DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JW40_9PHAE4.600e-1564.41HTH La-type RNA-binding domain-containing protein ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig672contigP-littoralis_Contig672:52192..52851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig672.12.1mRNA_P-littoralis_Contig672.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig672 48013..53435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig672.12.1 ID=prot_P-littoralis_Contig672.12.1|Name=mRNA_P-littoralis_Contig672.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=220bp
MQPEMRKEYCQFMGGVDTADQQNGAHAHDHKACNNHWRRVIDKKIEQSKT
NGFLCFRKWGSELKSEAEGRVESGEGETAANEKLGRAIVELDRLAKLERA
DWDTVLARELQARCNVGSTHAGGRRAQAKAKAKPSTEEGRVWGSVRVKAA
RYCMNPDCSKRSQNGCSCAECTAGGAQGTLMCRACFMDAASHTAAAVARV
QGAKGTRRRKDMGWIKHSE*
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