prot_P-littoralis_Contig661.66.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig661.66.1
Unique Nameprot_P-littoralis_Contig661.66.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length84
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig661.66.1 vs. uniprot
Match: A0A6H5L8B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.190e-15
Identity = 34/72 (47.22%), Postives = 55/72 (76.39%), Query Frame = 0 
Query:    9 VRKWVDRELDLIAASTPIGRSAATCVQDCRKHPALLYPYIHNMHQVGSIVANLNEAVEKEQLKVRKLEEEVA 80
            + +WV++EL+ I+  TPIGRS AT ++D R +P L+YPYIH+M Q+GS+V NL+  +E  + +VR+L+ ++A
Sbjct:   34 ISRWVEQELNNISEITPIGRSTATFIEDNRTNPVLVYPYIHSMAQIGSLVGNLHADIETARAEVRRLKRDLA 105
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig661.66.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L8B8_9PHAE1.190e-1547.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig661contigP-littoralis_Contig661:132400..132651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig661.66.1mRNA_P-littoralis_Contig661.66.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig661 132400..132652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig661.66.1 ID=prot_P-littoralis_Contig661.66.1|Name=mRNA_P-littoralis_Contig661.66.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=84bp
GTATPAEKVRKWVDRELDLIAASTPIGRSAATCVQDCRKHPALLYPYIHN
MHQVGSIVANLNEAVEKEQLKVRKLEEEVALLKT
back to top