prot_P-littoralis_Contig660.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig660.28.1
Unique Nameprot_P-littoralis_Contig660.28.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length564
Homology
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BLAST of mRNA_P-littoralis_Contig660.28.1 vs. uniprot
Match: A0A6H5KYM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM5_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 2.140e-24
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 0 
Query:  479 MILVGEADFVVTSPRSSFSALAAASGEPSTQRFGGISCEQLMNDPEFHSLQCAVDKWTVAQVQDPEEWAKLYPVVVDNNRRRCES 563
            M+LVG AD  VTSPRSS+SALAAA G  STQR+GGISC + +N+PEFH L+CA ++W V QV++P EW  +Y +V ++NR RC+ 
Sbjct:    1 MMLVGNADIAVTSPRSSYSALAAARGGSSTQRYGGISCTEQVNEPEFHCLECAKNEWKVDQVKNPTEWDNIYHLV-ESNRARCKG 84
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig660.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYM5_9PHAE2.140e-2458.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 373..512
e-value: 1.2E-7
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig660contigP-littoralis_Contig660:124717..132864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig660.28.1mRNA_P-littoralis_Contig660.28.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig660 124082..133945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig660.28.1 ID=prot_P-littoralis_Contig660.28.1|Name=mRNA_P-littoralis_Contig660.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=564bp
MHHSREKNGGQTLRRTSSALCCVGICCATWRGLEIATRRYQAARVLTLEA
EVPRAKSPGREVLRALGAEETQQIGAEGSSVFSAGGDRIGVITEEKEATN
GGTRAAESVFAASAQEDDKFHPDRFWEAYATDRHSLLTRGVVAGEGGGEN
GGDLETVDTSRVRPTKYVVFVTNYRTAGGLGNHMVGMMSAFAFSIATGRV
FLHDWTKPREMSVGYDDIFVPPFKPWDTSAANGSYVSGPNDILGENVDFE
NDTAGGGDGPTFDLEIAPSAGRSWVILPEVAVEENEDCSLDFGTPGGVQK
HHFVDVFIEKRGQDPRPDCPVIFIQSNQYLVDLLSSPAYGSSKVGNTPIS
EWLSSGRAAQTLFAGLFRPVATVRQRLADESARLYAMDQPTIAAHARATF
LQDITIRDKFVGCMEQLALSNNATRVLLATESDSFQEYVTSTLELSGVEV
VSMSGVERLGEGNKMRDSLEKIQMALTEMILVGEADFVVTSPRSSFSALA
AASGEPSTQRFGGISCEQLMNDPEFHSLQCAVDKWTVAQVQDPEEWAKLY
PVVVDNNRRRCES*
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