prot_P-littoralis_Contig66.171.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig66.171.1
Unique Nameprot_P-littoralis_Contig66.171.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length149
Homology
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: D7FHF7_ECTSI (40S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF7_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 4.970e-93
Identity = 137/141 (97.16%), Postives = 137/141 (97.16%), Query Frame = 0
Query:    8 MNEEVAVEETASPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            M EEVAVEET SPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIG EGEATKIVPCSCAVVTDYGEQTQAL VLLEHLKKGGD
Sbjct:    1 MKEEVAVEETGSPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGAEGEATKIVPCSCAVVTDYGEQTQALGVLLEHLKKGGD 141          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A835YYB7_9STRA (40S ribosomal protein S12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB7_9STRA)

HSP 1 Score: 219 bits (559), Expect = 2.510e-71
Identity = 102/130 (78.46%), Postives = 119/130 (91.54%), Query Frame = 0
Query:   19 SPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            +P  +V E+SV DALKEVLKKALIFDGLRRGLHEC KALDRG+ARLCCLAKDC+NPEYT+LVRALC+EG VH+IMV+TRQ+LGQWAGLCKI  EGEATK+VPCSCAVVTD+G ++ AL VL+EHL+KGG+
Sbjct:   16 APAADVAELSVPDALKEVLKKALIFDGLRRGLHECVKALDRGTARLCCLAKDCENPEYTRLVRALCEEGGVHIIMVNTRQQLGQWAGLCKIDAEGEATKVVPCSCAVVTDFGTESPALTVLMEHLRKGGE 145          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A7S2CVX4_9STRA (40S ribosomal protein S12 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVX4_9STRA)

HSP 1 Score: 206 bits (523), Expect = 7.910e-66
Identity = 102/141 (72.34%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    8 MNEEVAVEETA----SPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLK 144
            M EE AV ETA    + EVEV+E+ VLDALKEVLKKAL+ DGL RGLHECAKALD+ +A+LCCLAKDCDNPEYT+LVRALC+EG V+L+MVDT ++LG+W GLCKI +EGEATK+V CSCAV+T++GE++QALNVLLE LK
Sbjct:    1 MAEEDAVMETAEAAETEEVEVEEMGVLDALKEVLKKALVHDGLSRGLHECAKALDKHTAKLCCLAKDCDNPEYTKLVRALCEEGGVNLVMVDTGKQLGEWCGLCKIDEEGEATKVVRCSCAVITEFGEESQALNVLLEFLK 141          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A7S2CD91_9STRA (40S ribosomal protein S12 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CD91_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.820e-64
Identity = 100/139 (71.94%), Postives = 119/139 (85.61%), Query Frame = 0
Query:    7 EMNEEVAVEETASPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKK 145
            E+ +EVA EE   PEVEV+E+ VLDALKEVLKKAL+ DGLRRGLHE  KALDR SA+LCCLAKDCDNPEY +LVRALC+EG V+L+MV+T + LG+W GLCKI + GEA K+V CSCAVVT++GE+TQALN+LLE LKK
Sbjct:    5 EVMDEVAAEE---PEVEVEEMGVLDALKEVLKKALVHDGLRRGLHEGVKALDRHSAKLCCLAKDCDNPEYNKLVRALCEEGGVNLVMVETGKTLGEWCGLCKIDENGEAVKVVRCSCAVVTEFGEETQALNILLEFLKK 140          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A7S2LXQ0_9STRA (40S ribosomal protein S12 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LXQ0_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.120e-54
Identity = 88/141 (62.41%), Postives = 112/141 (79.43%), Query Frame = 0
Query:    8 MNEEVAVEETASPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            M++E  V+     E EV E++VLDALKEVLKKAL+ DGLR+GLHECAKALDR SARLCCLAKDC+N EY +L+RALC EG V +IMVD+ ++LG W GL K+  +GE  K V  SCAV+TD+GE+T+AL+VLL++L+K  D
Sbjct:   39 MSDEEIVDAVEEVEEEVAEMNVLDALKEVLKKALVHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALSVLLDYLQKQAD 179          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A8J2SJQ7_9STRA (40S ribosomal protein S12 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJQ7_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.590e-54
Identity = 90/140 (64.29%), Postives = 110/140 (78.57%), Query Frame = 0
Query:    5 DVEMNEEVAVEETASPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLK 144
            D E  EE   +  A  EVEV E+SVLDAL++VLK+ALI  GL+RGL E AKALD  +A+LCCLAKDCDN EY+ LVRALCDEG V L+MVD  ++LG+WAGLCKI +EGEAT +V CS A VT++GE T+AL+VLL +LK
Sbjct:    3 DDEPMEEAPADAPAEGEVEVAEMSVLDALRDVLKRALIHGGLKRGLREVAKALDSRTAKLCCLAKDCDNAEYSNLVRALCDEGGVSLVMVDEGKQLGEWAGLCKINEEGEATSVVRCSAACVTEFGEDTRALSVLLTYLK 142          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A6T5YAX8_9STRA (40S ribosomal protein S12 n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A6T5YAX8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.820e-54
Identity = 85/141 (60.28%), Postives = 110/141 (78.01%), Query Frame = 0
Query:    8 MNEEVAVEETASPEVEVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            M++   VE  A   VE  E+SVLDALKEVLKK+++ DGLR+GLHECAKALDR +ARLCCLAKDC+N EY +L+RALC EG VH++MV++ +ELG W GL K+ D+G   K V  SCAV+TD+GE+T+AL +LL+ L+K  D
Sbjct:    1 MSDTEEVEAPAPAVVEEVEMSVLDALKEVLKKSMVHDGLRKGLHECAKALDRRAARLCCLAKDCENEEYKKLIRALCAEGEVHVVMVESGKELGAWCGLAKLNDDGSVKKAVRTSCAVITDFGEETRALTILLDFLQKQAD 141          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A7S1UV16_9STRA (40S ribosomal protein S12 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UV16_9STRA)

HSP 1 Score: 176 bits (447), Expect = 2.920e-54
Identity = 85/137 (62.04%), Postives = 110/137 (80.29%), Query Frame = 0
Query:   14 VEETASPEVEVKEI--SVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            V+E  +P  E +E+  SVLDALKEVLKKA+I DGL++GLHECAKALDR SARLCCLAKDC+N EY +L+RALC EG VH++MVD+ ++LG W GL K+ D+G   K V  SCAV+TD+GE+T+AL +LL++L+K  D
Sbjct:    6 VDEAPAPVEEEEEVAMSVLDALKEVLKKAMIHDGLKKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVHVVMVDSGKDLGAWCGLAKLQDDGSVKKAVRTSCAVITDFGEETRALTILLDYLQKQAD 142          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: K0T7T2_THAOC (40S ribosomal protein S12 n=2 Tax=Thalassiosira TaxID=35127 RepID=K0T7T2_THAOC)

HSP 1 Score: 176 bits (446), Expect = 3.640e-54
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 0
Query:   23 EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD 148
            EV E++VLDALKEVLKKALI DGLR+GLHECAKALDR SARLCCLAKDC+N EY +L+RALC EG V +IMVD+ ++LG W GL K+  +GE  K V  SCAV+TD+GE+T+AL VLL++L+K  D
Sbjct:   16 EVAEMNVLDALKEVLKKALIHDGLRKGLHECAKALDRRSARLCCLAKDCENEEYKKLIRALCAEGEVSVIMVDSGKDLGAWCGLAKLDADGEVKKAVRTSCAVITDFGEETRALTVLLDYLQKQSD 141          
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Match: A0A7S2KYS2_9STRA (40S ribosomal protein S12 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYS2_9STRA)

HSP 1 Score: 175 bits (444), Expect = 7.110e-54
Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 0
Query:   15 EETASPEV-EVKEISVLDALKEVLKKALIFDGLRRGLHECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQELGQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLK 144
            E  A+PEV E  E+SVLDALKEVLK+AL+ DGL++GLHECAKALDR SARLCCLAKDC+N EY +L+RAL  EG V LIMVD+ +ELG W GL K+ + GE  K V CSCAV+T++GE+++ALNVLL++LK
Sbjct:    5 EAAAAPEVVEEAEMSVLDALKEVLKRALMHDGLKKGLHECAKALDRQSARLCCLAKDCENEEYKKLIRALSAEGKVSLIMVDSGKELGAWCGLAKLDENGEVKKAVRCSCAVITEFGEESRALNVLLDYLK 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF7_ECTSI4.970e-9397.1640S ribosomal protein S12 n=2 Tax=Ectocarpus TaxID... [more]
A0A835YYB7_9STRA2.510e-7178.4640S ribosomal protein S12 n=1 Tax=Tribonema minus ... [more]
A0A7S2CVX4_9STRA7.910e-6672.3440S ribosomal protein S12 n=1 Tax=Florenciella par... [more]
A0A7S2CD91_9STRA4.820e-6471.9440S ribosomal protein S12 n=1 Tax=Dictyocha specul... [more]
A0A7S2LXQ0_9STRA1.120e-5462.4140S ribosomal protein S12 n=1 Tax=Skeletonema mari... [more]
A0A8J2SJQ7_9STRA1.590e-5464.2940S ribosomal protein S12 n=1 Tax=Pelagomonas calc... [more]
A0A6T5YAX8_9STRA2.820e-5460.2840S ribosomal protein S12 n=3 Tax=Bacillariophyta ... [more]
A0A7S1UV16_9STRA2.920e-5462.0440S ribosomal protein S12 n=1 Tax=Grammatophora oc... [more]
K0T7T2_THAOC3.640e-5467.4640S ribosomal protein S12 n=2 Tax=Thalassiosira Ta... [more]
A0A7S2KYS2_9STRA7.110e-5466.4140S ribosomal protein S12 n=1 Tax=Leptocylindrus d... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000530Ribosomal protein S12ePRINTSPR00972RIBSOMALS12Ecoord: 116..129
score: 57.79
coord: 36..49
score: 68.18
coord: 91..112
score: 51.65
coord: 50..66
score: 52.94
IPR000530Ribosomal protein S12ePANTHERPTHR1184340S RIBOSOMAL PROTEIN S12coord: 23..145
IPR000530Ribosomal protein S12ePROSITEPS01189RIBOSOMAL_S12Ecoord: 32..50
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 31..125
e-value: 1.3E-23
score: 82.5
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 7..146
e-value: 2.5E-48
score: 164.7
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 29..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:594289..597008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.171.1mRNA_P-littoralis_Contig66.171.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig66 594289..597692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig66.171.1 ID=prot_P-littoralis_Contig66.171.1|Name=mRNA_P-littoralis_Contig66.171.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=149bp
MVAEDVEMNEEVAVEETASPEVEVKEISVLDALKEVLKKALIFDGLRRGL
HECAKALDRGSARLCCLAKDCDNPEYTQLVRALCDEGNVHLIMVDTRQEL
GQWAGLCKIGDEGEATKIVPCSCAVVTDYGEQTQALNVLLEHLKKGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000530Ribosomal_S12e
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like