prot_P-littoralis_Contig653.34.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig653.34.4
Unique Nameprot_P-littoralis_Contig653.34.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length903
Homology
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: A0A2H4ECA4_9PHAE (SAMSARA n=1 Tax=Ectocarpus sp. JMC-2016a TaxID=1813763 RepID=A0A2H4ECA4_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 3.550e-114
Identity = 275/617 (44.57%), Postives = 329/617 (53.32%), Query Frame = 0
Query:   67 MALLEHGPGVAPANAAVMGTSLSVGLSLKVSP-LTKLSTAASCVPGEGG-VLTVSDDTSC-THASLMARENSLAQAAEGLVRNSREKRAATAAGGELSPDAGKVEAEIATLELLNQRDTMLCDDLRAACRIGATTRAGGRGGGGGAQRAKLSCWALVQDIGFSKKALLPSPPGKASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGAPTQTTERENEEGTPEKRLFSKYDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFEFCVMNPKDQPLTEKS-PVQQQSP-------------------QRASTPTGGVEPRSIAEVAQGGTNNDETQIPASGTNHDAARSG--------PSVSHEGQSA-MPLDT-----QPPGPQQSLQQQ----------------------------------------LGPQQRRSVALHPGALAPGLVYASQAALQATNVNPSIRAPHEF--WATPSAGMDRRRSSIVFPHGGLGNPQ----------QSGPPLPSIPQQAA----DPRGASR---APQHADVRGFDANSSAFHQAQQNHEALRR 587
            M L E G G     A V G  L+ G++ KV+P +  LSTAA+CVPG GG VLTVSD TSC  +A+L+ARE+SL+QAA  LVRN+ E  AA  A    + DAG+VEAEIATLELLNQRDTMLCDD+RAACR+G TT+ G    G   +++KLSCWA VQ IG  KKA++P PP +A S                                                     ++E     KR+FSKYDEETTSILTEWFL+HKRWPYPA KEK+ LAE TNLTTLQISNWFTNKRKRHWTPVIKKR RSPRDFFEFCVMNPKD  L EK  P+QQ+                     Q+      G    ++ + AQ G NN       +  +H              PS+ + GQS+ MP DT     + PG    L Q                                          GPQ       HPGALAPGLVYAS+AA QA N++PSI++      W TP  GM+RR  S+ +PHGG+   Q          Q GP  PS P Q A    + R  SR   APQ + +RGFD NS  FHQAQQ+HE+LRR
Sbjct:    1 MELHEKG-GAVSLPAPVAGNGLATGMAWKVAPTINMLSTAAACVPGAGGGVLTVSDSTSCRNNANLVAREDSLSQAAASLVRNAAEIDAAGGAKAHPAIDAGRVEAEIATLELLNQRDTMLCDDIRAACRLGTTTKPGA---GVAGKQSKLSCWATVQGIGVPKKAVVP-PPSEALSDGEKNDDPPSLPRPASGSTVGSGSGEGDDQEDGNGD-----------------DHETSISRKRVFSKYDEETTSILTEWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKDHSLVEKKLPLQQEQXXXXXXXXXXXXXXXXXXXQQQRGIAVVGANSFALPDTAQHGMNNGNGNSSGTQVHHGGGXXXXXXXXPALPSLPYNGQSSRMPFDTRSTAAETPGGGAWLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPQ-------HPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVGMERRGHSMAYPHGGMRTAQHNQGQGQDKGQGGPLHPSTPPQGATQVPNSRDGSRMNTAPQFSGIRGFDTNSG-FHQAQQSHESLRR 587          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: D7FSW8_ECTSI (Homeobox domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW8_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.070e-49
Identity = 102/194 (52.58%), Postives = 116/194 (59.79%), Query Frame = 0
Query:  183 MLCDDLRAACRIGATTRAGGRGGGGGAQRAKLSCWALVQDIGFSKKALLPSPPGKASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRGAPTQTTERENEEGTPEKRLFSKYDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFE 376
            MLCDD+RAACR+G TT+ G    G   +++KLSCWA VQ IG  KKA++P PP +A S                                                     ++E     KR+FSKYDEETTSILTEWFL+HKRWPYPA KEK+ LAE TNLTTLQISNWFTNKRKRHWTPVIKKR RSPRDFFE
Sbjct:    1 MLCDDIRAACRLGTTTKPGA---GVAGKQSKLSCWATVQGIGVPKKAVVP-PPSEALSDGEKNDDPPSLPRPASGSTVGSGSGEGDDQEDGNGD-----------------DHETSISRKRVFSKYDEETTSILTEWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFE 173          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: A0A678SK93_MALDO (Knotted1-like homeobox n=7 Tax=Maleae TaxID=721813 RepID=A0A678SK93_MALDO)

HSP 1 Score: 73.2 bits (178), Expect = 4.230e-10
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  302 KRLFSKYDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTP 362
            KR   K  ++  S L++W+++H RWPYP  +EK  L+E T L   QI+NWF N+RKRHW P
Sbjct:  234 KRKKGKLPKDARSTLSDWWITHYRWPYPTEEEKLQLSEMTGLDQKQINNWFINQRKRHWKP 294          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: T0S7D7_SAPDV (Homeobox domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S7D7_SAPDV)

HSP 1 Score: 69.3 bits (168), Expect = 1.910e-9
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0
Query:  312 TTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFEFCV 379
            +   +T WFL+HK  PYP+ KE++ +A  T L+ LQ+ NWF N RKRHW P  +   + PR   +  +
Sbjct:  152 SNEFMTAWFLAHKGNPYPSAKERNEIASTTQLSELQVRNWFANMRKRHWKP--QNSDKKPRCLLDLVL 217          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: A0A1V9ZWK2_9STRA (Homeobox domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWK2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.050e-9
Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 0
Query:  311 ETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFEFCV 379
            E+   +T WFL+HK  PYP+ KE+  +A  T L+ LQ+ NWF N RKRHW P  +   + PR   +  +
Sbjct:  155 ESNEFMTAWFLAHKGNPYPSAKERVEIAAVTQLSELQVRNWFANMRKRHWKP--QNEDKKPRCLLDLVL 221          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: G1QCC7_MYOLU (SIX homeobox 2 n=2 Tax=Myotis lucifugus TaxID=59463 RepID=G1QCC7_MYOLU)

HSP 1 Score: 67.4 bits (163), Expect = 3.720e-9
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 0
Query:  308 YDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFEFCVMNPKDQPLTEKSPVQQQSPQRASTPTG 406
            + E++ S+L EW+  +   PYP+P+EK  LAEAT LTT Q+SNWF N+R+R      K+ + +      F +++P    L  K PV   SP    +P G
Sbjct:   89 FKEKSRSVLREWYAHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKEGLGA------FVLLSPFSYELPSKPPVS--SPPEGLSPPG 176          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: UPI001CB874BD (homeobox protein SIX2a isoform X3 n=2 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB874BD)

HSP 1 Score: 68.9 bits (167), Expect = 5.420e-9
Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0
Query:  308 YDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFEFCVMNPKDQPLTEKSPVQQ 395
            + E++ S+L EW+  +   PYP+P+EK  LAEAT LTT Q+SNWF N+R+R      K+R  +P D    CV        T+  P++Q
Sbjct:  131 FKEKSRSVLREWYAHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERYDNPTDM---CVST------TDSGPIRQ 206          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: H9GNL3_ANOCA (Homeobox domain-containing protein n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9GNL3_ANOCA)

HSP 1 Score: 68.9 bits (167), Expect = 7.360e-9
Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 0
Query:  308 YDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFEFCVMNPKDQPLTEKSPVQQQSP 398
            + E++ S+L EW+L +   PYP+P+EK  LAEAT LTT Q+SNWF N+R+R      K+R  S   F +     P+++ L   S   + SP
Sbjct:  148 FKEKSRSVLREWYLHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAETKERESSEGGFLKEGRGLPRERHLLISSSEDESSP 235          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: A0A1V9ZAI4_9STRA (Homeobox domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZAI4_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.220e-8
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  306 SKYDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKRIRSPRDFFEFCV 379
            S+    +  I+T WFL+HK  PYP+  E+  +A  T L+ LQ+ NWF N RKRHW P   ++   PR   +  +
Sbjct:  131 SRLTRRSNEIMTAWFLAHKGNPYPSGAERLAIANKTQLSELQVRNWFANMRKRHWKPSNSEK--KPRCLLDLVL 202          
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Match: A0A7L0PI97_9AVES (SIX1 protein (Fragment) n=1 Tax=Mesembrinibis cayennensis TaxID=1118748 RepID=A0A7L0PI97_9AVES)

HSP 1 Score: 65.9 bits (159), Expect = 1.290e-8
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  305 FSKYDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISNWFTNKRKRHWTPVIKKR 367
            F  + E++ S+L EW+  +   PYP+P+EK  LAEAT LTT Q+SNWF N+R+R      K+R
Sbjct:  120 FKXFKEKSRSVLREWYAHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig653.34.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H4ECA4_9PHAE3.550e-11444.57SAMSARA n=1 Tax=Ectocarpus sp. JMC-2016a TaxID=181... [more]
D7FSW8_ECTSI1.070e-4952.58Homeobox domain-containing protein n=1 Tax=Ectocar... [more]
A0A678SK93_MALDO4.230e-1049.18Knotted1-like homeobox n=7 Tax=Maleae TaxID=721813... [more]
T0S7D7_SAPDV1.910e-941.18Homeobox domain-containing protein n=2 Tax=Saprole... [more]
A0A1V9ZWK2_9STRA2.050e-942.03Homeobox domain-containing protein n=1 Tax=Thraust... [more]
G1QCC7_MYOLU3.720e-938.38SIX homeobox 2 n=2 Tax=Myotis lucifugus TaxID=5946... [more]
UPI001CB874BD5.420e-940.91homeobox protein SIX2a isoform X3 n=2 Tax=Chiloscy... [more]
H9GNL3_ANOCA7.360e-940.66Homeobox domain-containing protein n=2 Tax=Anolis ... [more]
A0A1V9ZAI4_9STRA1.220e-839.19Homeobox domain-containing protein n=1 Tax=Achlya ... [more]
A0A7L0PI97_9AVES1.290e-847.62SIX1 protein (Fragment) n=1 Tax=Mesembrinibis caye... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 299..366
e-value: 7.6E-10
score: 48.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 299..362
score: 12.567976
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 302..360
e-value: 9.00094E-13
score: 61.8756
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 319..358
e-value: 6.8E-14
score: 51.5
NoneNo IPR availableGENE3D1.10.10.60coord: 298..372
e-value: 3.9E-22
score: 79.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 572..634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..696
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..731
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 820..855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 878..902
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..474
NoneNo IPR availablePANTHERPTHR11850:SF299HOMEOBOX PROTEIN CUP9-RELATEDcoord: 121..363
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 121..363
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 301..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig653contigP-littoralis_Contig653:140968..154018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig653.34.4mRNA_P-littoralis_Contig653.34.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig653 140933..154599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig653.34.4 ID=prot_P-littoralis_Contig653.34.4|Name=mRNA_P-littoralis_Contig653.34.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=903bp
MWLLRRAASPIAFVEFQHLKSCPTRGQRQPPVRFGECTALSRALSDSLSN
KNIYLILPSLPNITACMALLEHGPGVAPANAAVMGTSLSVGLSLKVSPLT
KLSTAASCVPGEGGVLTVSDDTSCTHASLMARENSLAQAAEGLVRNSREK
RAATAAGGELSPDAGKVEAEIATLELLNQRDTMLCDDLRAACRIGATTRA
GGRGGGGGAQRAKLSCWALVQDIGFSKKALLPSPPGKASSPSPPAKALSP
SPPEEAISPSLPEEALPPSPPKEALSRSPPNEKRGAPTQTTERENEEGTP
EKRLFSKYDEETTSILTEWFLSHKRWPYPAPKEKDTLAEATNLTTLQISN
WFTNKRKRHWTPVIKKRIRSPRDFFEFCVMNPKDQPLTEKSPVQQQSPQR
ASTPTGGVEPRSIAEVAQGGTNNDETQIPASGTNHDAARSGPSVSHEGQS
AMPLDTQPPGPQQSLQQQLGPQQRRSVALHPGALAPGLVYASQAALQATN
VNPSIRAPHEFWATPSAGMDRRRSSIVFPHGGLGNPQQSGPPLPSIPQQA
ADPRGASRAPQHADVRGFDANSSAFHQAQQNHEALRRRTQISGVSPPASQ
HGPNQQQGANQQQQHQQPTAQRQMGQQYPTPMGQKKQRVPNPEGLPATRA
AWAAVPPTPAQKAAGQRVPNPEGLPTTRAAWAAVPPTPAQQAAGSAHSTC
TLWASHCPPSPRRFAGPPTFPQRVNGGGGGDHAQYSPGLFCPKGAEAASY
SSARLKANASGVGSLGGGNGYSAWCESSSSAKPDPFPRVAAFVASGGAGA
GAAGSGATFAVKGVVPGGGSGGGGTGISQRPGDPPHLSPDARGPLHHPYL
PQQQQQYWDLSMTGRAWPAVGAGGVPIPPPHHPITFGSDCSRGPPSLSPA
TG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf