prot_P-littoralis_Contig65.86.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig65.86.3
Unique Name	prot_P-littoralis_Contig65.86.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	567

Homology

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: D8LQJ7_ECTSI (T-complex protein 1 subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQJ7_ECTSI)

HSP 1 Score: 1010 bits (2612), Expect = 0.000e+0
Identity = 538/566 (95.05%), Postives = 547/566 (96.64%), Query Frame = 0

Query:    1 MGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQEDPRARRGGGMGGMPGM 566
            MGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNL+NAAKTAMSSKILGPES FFAEMAVDAVTAVRTESGGDLGKK  K YPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAK+ CLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILS+GATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLG+A+EVSEQRVGDGELIFFKGTKTQASCT+VLRGANDFMLDEMDRALHD+LMVIKRMLESNVLVAGGG+VETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ DATELVAKLRAYHNTSQLQEDK            TEYR+YGLELVEGKVRDNLACGVVEPAISKIKS RFATEAAITILRIDDMIKLDKQEQEDPRARRGGGMGGMPGM
Sbjct:    1 MGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLINAAKTAMSSKILGPESDFFAEMAVDAVTAVRTESGGDLGKKVVK-YPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKIACLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSSGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGQADEVSEQRVGDGELIFFKGTKTQASCTVVLRGANDFMLDEMDRALHDSLMVIKRMLESNVLVAGGGSVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ-DATELVAKLRAYHNTSQLQEDK------------TEYRHYGLELVEGKVRDNLACGVVEPAISKIKSFRFATEAAITILRIDDMIKLDKQEQEDPRARRGGGMGGMPGM 552

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: A0A835YVW9_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVW9_9STRA)

HSP 1 Score: 869 bits (2245), Expect = 1.740e-314
Identity = 469/567 (82.72%), Postives = 512/567 (90.30%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNY-GLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQEDPRARRGGGMG-GMPGM 566
            G+RT GQDVRTQNVTAATAIANIVK+SLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVE+A+LQDQEVGDGTTSVVI+AAELLKRANEL+KNNIHPT+VM+GYRLALKEAVKYIK+NLCVPVD LGRPNL+NAAKT+MSSKILGPES FF+ +AVDAVTAVR+ES G+ GK   K YPVSAVHILKCHG S LDS++  GYALN  RA+QGMPT+V+ AK+  LD NLQR+KMQMGV+VVV D+KEVDAIRQREMDITKERIEKIL++GA VVLT+KGIDDLCLKYFVEA AMAVRRVK ED+RRIAKATGA IV+TLADMEGNETFDP VLGEAEEVSE+RVGDGELIF KGT+TQASCT+VLRGAN++MLDEMDRALHD+LMVIKRMLE NVLVAGGGAVE ALSIYLE+FATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ DATELVAKLRA+HNTSQLQEDK             E   Y GL+L+ GKVR+NL  GVVEPAISKIKSLRFATEAAITILRIDD+IKL+KQE +DPR R  GGMG GMPGM
Sbjct:    4 GERTSGQDVRTQNVTAATAIANIVKTSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVEVAELQDQEVGDGTTSVVIIAAELLKRANELVKNNIHPTSVMSGYRLALKEAVKYIKSNLCVPVDTLGRPNLINAAKTSMSSKILGPESDFFSNLAVDAVTAVRSESTGEGGKTLVK-YPVSAVHILKCHGQSSLDSQLIKGYALNATRAAQGMPTTVRGAKIALLDFNLQRHKMQMGVEVVVKDMKEVDAIRQREMDITKERIEKILASGANVVLTSKGIDDLCLKYFVEAKAMAVRRVKPEDLRRIAKATGAKIVSTLADMEGNETFDPAVLGEAEEVSEERVGDGELIFVKGTRTQASCTVVLRGANEYMLDEMDRALHDSLMVIKRMLEGNVLVAGGGAVEVALSIYLENFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ-DATELVAKLRAFHNTSQLQEDK-------------EVLKYTGLDLINGKVRNNLDAGVVEPAISKIKSLRFATEAAITILRIDDLIKLEKQEAQDPRGR--GGMGNGMPGM 553

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: A0A024TJ60_9STRA (T-complex protein 1 subunit alpha n=15 Tax=Eukaryota TaxID=2759 RepID=A0A024TJ60_9STRA)

HSP 1 Score: 750 bits (1936), Expect = 1.230e-267
Identity = 402/550 (73.09%), Postives = 464/550 (84.36%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQED 551
            G RT G+DVR QNVTAA AIANIVKSSLGPVGLDKMLVD +GDVTITNDGATILK L+VEHPA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL++N IHPT++++GYRLA++EAVKYIK +L VPVD LGR +LVNAAKT+MSSKI+GPES FFA + VDAVT+V+T   G  GK   K YPVSA+++LK HG S L+S++  G+ALNC RASQ MPTSV+ AK+  LD +LQR+KMQMGVQ+VVND KE+D IRQRE+DITKERI+KIL AGA V+LTTKGIDDLC+KYFVEAG M VRR KKED+RRIAKATG  +V TLADM+G ETFD   LG A EVSE+RVGDGELI+ KG   + + T+VLRGAN+ +LDEMDR+LHD+LMV+KRMLESN LVAGGGAVE+ALSIYLE++ATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+ DA+ELVA+LRA+HNTSQ   D A           T  R  GL+L  G VRDNLA GVVEPAISKIKSLRFATEAAITILRIDDMI+L+ +E E+
Sbjct:    7 GKRTSGKDVREQNVTAALAIANIVKSSLGPVGLDKMLVDNIGDVTITNDGATILKMLEVEHPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVQNKIHPTSIISGYRLAMREAVKYIKEHLSVPVDSLGRTSLVNAAKTSMSSKIIGPESEFFANLVVDAVTSVKTTEEGAKGKVVTK-YPVSAINVLKAHGKSALESQLVDGFALNCTRASQAMPTSVRPAKIALLDFDLQRHKMQMGVQMVVNDPKELDQIRQREVDITKERIQKILDAGANVILTTKGIDDLCMKYFVEAGCMGVRRCKKEDLRRIAKATGGQVVLTLADMDGGETFDAASLGTAAEVSEERVGDGELIYIKGCANRQATTVVLRGANEMLLDEMDRSLHDSLMVVKRMLESNQLVAGGGAVESALSIYLETYATTLGSREQLAIAEFADALLVIPKTLAVNAAK-DASELVARLRAHHNTSQT--DAAQ----------TALRFSGLDLQRGNVRDNLAAGVVEPAISKIKSLRFATEAAITILRIDDMIRLNPKEDEN 542

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: H3G982_PHYRM (T-complex protein 1 subunit alpha n=23 Tax=Oomycota TaxID=4762 RepID=H3G982_PHYRM)

HSP 1 Score: 749 bits (1935), Expect = 1.940e-267
Identity = 398/548 (72.63%), Postives = 464/548 (84.67%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQ 549
            G RT G+DVR  NVTAA AIANIVKSSLGPVGLDKMLVD++GDVTITNDGATILKQL+VE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPT+++AGYRLA++EAVKYIK NL VPVD LGR +LVNAAKT+MSSKILGPES FFA + VDAV++VR E  G  GK   K YPVS++++LK HG S L++++  G+ALNC +ASQ MPT ++NAK+  LD +LQR++MQMGVQVVVND  E++ IRQRE+DITKE+I+K++ AGA V+LTTKGIDDLCLKYFVE+G M VRR KKED++RIAKATG  +V TLADMEG ETFDP  LGEA+EV E+RVGDGELI+ KG KT+ + T+VLRGAN+ MLDEMDR++HDA MV+KRMLESN LVAGGGAVE ALSIYLE+FATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+ DA+ELVA+LRA+HNTSQ    K             E R  GL+L+EG VRDNL  GVVEPAISKIKSLRFATEAAITILRIDD+IKL+ +E+
Sbjct:   10 GTRTSGKDVRELNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDTLGRESLVNAAKTSMSSKILGPESEFFANLVVDAVSSVRVEQEGAKGKVKAK-YPVSSINVLKAHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVVVNDPNELELIRQREIDITKEKIQKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPLTLGEAQEVIEERVGDGELIYIKGCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAK-DASELVARLRAHHNTSQSDASKR------------ELRFSGLDLLEGAVRDNLEAGVVEPAISKIKSLRFATEAAITILRIDDLIKLNPKEE 543

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: M4BE66_HYAAE (T-complex protein 1 subunit alpha n=8 Tax=Oomycota TaxID=4762 RepID=M4BE66_HYAAE)

HSP 1 Score: 748 bits (1931), Expect = 7.880e-267
Identity = 394/548 (71.90%), Postives = 465/548 (84.85%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQ 549
            G RT G+D+R QNVTAA AIANIVKSSLGPVGLDKMLVD++GDVTITNDGATILKQL+VE PA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPT+++AGYRLA++EAVKYIK NL VPVD +GR +LVNAAKT MSSKILGPES FFA + VDAV++++ E  G  GK   K YPVS++++LK HG S L++++  G+ALNC +ASQ MPT ++NAK+  LD +LQR++MQMGVQV+VND  E++ IRQRE+DITKE+I K++ AGA V+LTTKGIDDLCLKYFVE+G M VRR KKED++RIAKATG  +V TLADMEG ETFDP  LGEA+EV E+RVGDGELI+FKG KT+ + T+VLRGAN+ MLDEMDR++HDA MV+KRMLESN LVAGGGAVE ALSIYLE+FATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+ DA+ELVA+LRA+HNTSQ    K+            E R  GL+L+EG VR+NL  GVVEPAISKIKSLRFATEAAITILRIDD+IKL+ +E+
Sbjct:   10 GTRTSGKDIREQNVTAAVAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKQLEVEQPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYIKENLSVPVDSIGRESLVNAAKTCMSSKILGPESEFFANLVVDAVSSIKVEHEGAKGKVKAK-YPVSSINVLKSHGKSALETQLVDGFALNCTKASQQMPTYIKNAKIALLDFDLQRHRMQMGVQVIVNDPNELEKIRQREVDITKEKIYKMIDAGANVILTTKGIDDLCLKYFVESGCMGVRRCKKEDLQRIAKATGGQVVLTLADMEGEETFDPLTLGEAQEVCEERVGDGELIYFKGCKTRQATTVVLRGANENMLDEMDRSMHDAFMVVKRMLESNQLVAGGGAVEAALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAK-DASELVARLRAHHNTSQSDVSKS------------ELRFSGLDLLEGSVRNNLEAGVVEPAISKIKSLRFATEAAITILRIDDLIKLNLKEE 543

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: A0A7S2BQP8_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BQP8_9STRA)

HSP 1 Score: 745 bits (1924), Expect = 1.060e-265
Identity = 397/563 (70.52%), Postives = 465/563 (82.59%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQEDPRARRGGGMGGMP 564
            G+RT GQDVR  NVTA  AIANIVKSSLGPVGLDKMLVD +GDVTITNDGATILK L+VEHPAAKVLVELADLQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPTTVM+GYRLA++EAVKYIK NL V  D+LG   L+NA +T+M+SKILGPES FFA MAV A+T+V++     +  + +  YPVSAVHILKCHG S L+S++  G+ALNC RASQ MPT +  AK+  LD +L+R+KMQMGVQVVVN+ KEV+ IRQRE DITKERIEKIL +GA V+LTTKGIDDLC+KYFVE G +A+RRVKKED++R+A+ATG ++V TLADMEGNETF+   LG AE V E+RVGDGELI+ +G  TQ + T+VLRGAND+MLDEMDRALHD+L VIKR+LESN +VAGGGAVETALSIYL+ FATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ DAT+L+ KLRAYHNT+Q   ++ + +           +  GL+L++GK+R+NL  GVVEPAISKIKSLRFATEAAITILRIDDMIKL   +Q+        G GGMP
Sbjct:    9 GERTTGQDVRMANVTACMAIANIVKSSLGPVGLDKMLVDAIGDVTITNDGATILKMLEVEHPAAKVLVELADLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTTVMSGYRLAMREAVKYIKNNLLVSADELGDDVLLNACRTSMASKILGPESDFFAAMAVKALTSVKS-----VNNEGKARYPVSAVHILKCHGRSALESELVDGFALNCTRASQQMPTRIDGAKIALLDFDLKRHKMQMGVQVVVNEAKEVEGIRQREQDITKERIEKILESGANVILTTKGIDDLCMKYFVERGCIAIRRVKKEDIKRLARATGGTVVVTLADMEGNETFEASNLGTAETVQEERVGDGELIYLRGLPTQRAVTVVLRGANDYMLDEMDRALHDSLCVIKRVLESNSVVAGGGAVETALSIYLDDFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQ-DATDLIGKLRAYHNTAQQSPEEKANL-----------KYSGLDLMKGKIRNNLEFGVVEPAISKIKSLRFATEAAITILRIDDMIKLAGPQQQ--------GQGGMP 546

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: A0A7S1TNK3_9STRA (T-complex protein 1 subunit alpha (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNK3_9STRA)

HSP 1 Score: 740 bits (1911), Expect = 5.180e-264
Identity = 391/541 (72.27%), Postives = 454/541 (83.92%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTE-SGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDM 541
            G+R+ G+DVRT NVTA  AIANIV+SSLGP GLDKMLVD +GDVTITNDGATILKQLDVEHPAAKVLVELADLQD EVGDGTTSV I+AAELL+RAN L+K  +HPTT+M+G R+ALKEAVKY+K NL VP D+LGR NL+NAAKT+MSSKI+GP+S FFA M VDAV  VRTE   G   K+AR  YPVSA+HILKCHG S LDS++  G+ALN  RA+QGMPT V+NAK+  LD NLQR+KMQMGV VVVN+V+EV+ IRQREMDITKERI KI+ AGA V+LTTKGIDDLCLKYFVEAGA+A RRVK EDMRRIA+ATG  IVTTLAD+EGNE FDP  LG AE V E+RVGDGEL++ +GT   A+CT+VLRGAN++MLDEMDRALHD+LMV+KRMLESN LVAGGGAVE ALS++LES+A ++ +REQ+AI+EF+EALLVIP+TLAVNAAQ DATELVA+LRAYH+T+Q    +             + +  GL+L EG VRDNLA GVVEPAISKIKS+RFA EAAITILRIDDM
Sbjct:    7 GERSTGEDVRTSNVTAVMAIANIVRSSLGPTGLDKMLVDNIGDVTITNDGATILKQLDVEHPAAKVLVELADLQDSEVGDGTTSVTILAAELLRRANMLVKQGVHPTTIMSGMRMALKEAVKYVKENLVVPADELGRENLINAAKTSMSSKIIGPDSDFFANMVVDAVQMVRTEPEEGSARKRAR--YPVSAIHILKCHGRSALDSELVDGFALNTSRAAQGMPTFVENAKLALLDFNLQRHKMQMGVSVVVNEVREVEGIRQREMDITKERIRKIIDAGANVILTTKGIDDLCLKYFVEAGAIACRRVKMEDMRRIARATGGQIVTTLADLEGNENFDPANLGRAEIVREERVGDGELLYIRGTPRSAACTLVLRGANEYMLDEMDRALHDSLMVVKRMLESNALVAGGGAVEAALSMHLESYAMSVATREQMAISEFSEALLVIPRTLAVNAAQ-DATELVARLRAYHHTAQSNRGRE------------QLKYSGLDLFEGAVRDNLAAGVVEPAISKIKSMRFAVEAAITILRIDDM 532

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BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: A0A7S2UZQ7_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ7_9STRA)

HSP 1 Score: 739 bits (1908), Expect = 4.420e-263
Identity = 394/547 (72.03%), Postives = 457/547 (83.55%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQE 548
            G R  GQDVR  NVTAA A+ANIVK+SLGPVGLDKMLVD++GDVTITNDGATIL+QL+VEHPAAKVLVELADLQDQEVGDGTTSVVI+AAELLKRANELIK  +HPT++MAGYRLALK AVK+IK NL V   ++GR NL+NAAKT+M+SKI+GP+S FFA+MAV AVTAVR E+    G K    +PVS +H+LKCHG S  +S +  GYALNC RA QGMPT V+NAK+ C+D NLQ++KMQMGV VV  DVKEV+ IRQREMDITKERI K+L AGA VVLTTKGIDDLC+KYFVEAGAMAVRRVK ED++RIAKA+G  +VTT+ADMEGNE FDP  LG AEEV+E+RVGDGELI+ KGT TQA  T+VLRGAN+++LDEMDRALHD+LMVIKR+L+SN LVAGGGAVE AL++ LES+ATT+ +REQLA+ EFAEALLVIPKTLAVNAA+ DATELVA LRA H  SQ  + +AS           E R  GL+L +G+ R+NL  GVVEPAISKIKSLRFATEAAITILRIDDMIK+ + E
Sbjct:    8 GSRQTGQDVRMANVTAAVAVANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILQQLEVEHPAAKVLVELADLQDQEVGDGTTSVVIIAAELLKRANELIKVKVHPTSIMAGYRLALKHAVKHIKDNLVVQAKEMGRENLMNAAKTSMASKIIGPDSDFFADMAVSAVTAVRMET--QEGSKTVVRHPVSNIHVLKCHGKSARESHLVNGYALNCTRAGQGMPTVVRNAKIACVDFNLQKHKMQMGVSVVCEDVKEVEGIRQREMDITKERILKMLEAGANVVLTTKGIDDLCMKYFVEAGAMAVRRVKMEDLKRIAKASGGQVVTTMADMEGNEAFDPAWLGTAEEVAEERVGDGELIYLKGTATQACVTLVLRGANEYLLDEMDRALHDSLMVIKRVLDSNSLVAGGGAVEVALNVALESYATTITTREQLAVMEFAEALLVIPKTLAVNAAK-DATELVANLRAIHAASQDSQSEAS-----------EDRFVGLDLYKGETRNNLQAGVVEPAISKIKSLRFATEAAITILRIDDMIKIQRDE 540

[Close]

BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: A0A024G0Q1_9STRA (T-complex protein 1 subunit alpha n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G0Q1_9STRA)

HSP 1 Score: 736 bits (1900), Expect = 3.640e-262
Identity = 398/548 (72.63%), Postives = 454/548 (82.85%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQ 549
            G RT G+DVR  NVTAA A+ANIVKSSLGPVGLDKMLVD++GD+TITNDGATILKQL+VEHPAAKVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL+KN IHPT+++AGYRLA++EAVKY+K NL VPVD LGR  LVNAAKT+MSSKILGPES  FA M VDAVT+V+    G  GK   + YPVSA+++LK HG S L+S++  G+ALNCVRASQGMPT V+NAK+  LD +LQRY+ QMGVQVVV D KE++ IRQRE+DITKE+I+KIL AGA V+LTTKGIDDLCLKYFVEA AM VRRVKKED+ RIA+ATG  +V TLADMEG ETFDP  LGEAE VSE+RVGDGELI+ KG KT  + T+VLRGAN+ MLDEMDR LHDALMV+KRMLESN LVAGGGAVE ALSIYLE++A TL SREQLAI EFAEALL+IPKTLAVNAAQ DA ELVA+L A H  SQ                + E R  GLEL+EG V +NL  GVVEPAISKIKSLRFATEAAITILRIDDMIK++ +++
Sbjct:    8 GTRTSGKDVREHNVTAAIAVANIVKSSLGPVGLDKMLVDDIGDITITNDGATILKQLEVEHPAAKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVKNKIHPTSIIAGYRLAMREAVKYVKENLSVPVDSLGRSVLVNAAKTSMSSKILGPESELFANMVVDAVTSVKVMGEGSKGKMTAR-YPVSAINVLKAHGKSALESELVDGFALNCVRASQGMPTVVKNAKIALLDFDLQRYRNQMGVQVVVTDPKELEQIRQREIDITKEKIQKILDAGANVLLTTKGIDDLCLKYFVEAKAMGVRRVKKEDLVRIARATGGQVVLTLADMEGEETFDPANLGEAEVVSEERVGDGELIYIKGCKTSRATTLVLRGANENMLDEMDRTLHDALMVVKRMLESNQLVAGGGAVECALSIYLENYANTLSSREQLAIVEFAEALLIIPKTLAVNAAQ-DAAELVARLCAQHTKSQSGG-------------SDELRFSGLELLEGTVCNNLEAGVVEPAISKIKSLRFATEAAITILRIDDMIKINPKQE 540

[Close]

BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Match: A0A1W0A1E9_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1E9_9STRA)

HSP 1 Score: 757 bits (1954), Expect = 7.550e-259
Identity = 401/549 (73.04%), Postives = 469/549 (85.43%), Query Frame = 0

Query:    2 GDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITNDGATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANELIKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMSSKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHGLSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQVVVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVEAGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVSEQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRMLESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTLAVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLELVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQE 550
            G RT G+DVR QNVTAA AIANIVKSSLGPVGLDKMLVD++GDVTITNDGATILK L+VEHPA KVLVELA LQDQEVGDGTTSVVI+AAELLKRANEL++N IHPT+++AGYRLA++EAVKYIK +L VPVD +GR +LVNAAKT+MSSKI+GPES FFA + VDAVT+V+T   G  GK   K YPVSA+++LK HG S L+S++  G+ALNC RASQ MP++V+NAK+  LD +LQR+KMQMGVQ+VV D KEVDAIRQRE DITKERI+KIL AGA V+LTTKGIDDLC+KYFVE+G M VRR KKED+RRIAKATG  +V TLADMEG ETFD + LG A EVSE+RVGDGELI+ KG  T+ + T+VLRGAN+  LDE+DR+LHD+LMV+KRMLESN LVAGGGAVE+ALSIYLE+FATTLGSREQLAIAEFA+ALLVIPKTLAVNAA+ DA+ELVA+LRA+HNTSQ+ + KA            + R  GL+L+ GKVRDNL  GVVEPAISKIKSLRFATEAAITILRIDDMI+L+ +E++
Sbjct:  825 GTRTSGKDVREQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAGKVLVELAGLQDQEVGDGTTSVVIIAAELLKRANELVQNKIHPTSIIAGYRLAMREAVKYIKEHLSVPVDSIGRASLVNAAKTSMSSKIIGPESEFFANLVVDAVTSVKTTEEGAKGKIVTK-YPVSAINVLKAHGKSALESQLVDGFALNCTRASQAMPSTVKNAKIALLDFDLQRHKMQMGVQMVVTDPKEVDAIRQREYDITKERIQKILDAGANVILTTKGIDDLCMKYFVESGCMGVRRCKKEDLRRIAKATGGQVVLTLADMEGEETFDAKCLGHAAEVSEERVGDGELIYIKGCATRQATTVVLRGANEMALDEIDRSLHDSLMVVKRMLESNQLVAGGGAVESALSIYLENFATTLGSREQLAIAEFADALLVIPKTLAVNAAK-DASELVARLRAHHNTSQVDKSKA------------QLRFSGLDLLNGKVRDNLEAGVVEPAISKIKSLRFATEAAITILRIDDMIRLNPKEEQ 1359

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig65.86.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQJ7_ECTSI	0.000e+0	95.05	T-complex protein 1 subunit alpha n=2 Tax=Ectocarp...	[more]
A0A835YVW9_9STRA	1.740e-314	82.72	T-complex protein 1 subunit alpha n=1 Tax=Tribonem...	[more]
A0A024TJ60_9STRA	1.230e-267	73.09	T-complex protein 1 subunit alpha n=15 Tax=Eukaryo...	[more]
H3G982_PHYRM	1.940e-267	72.63	T-complex protein 1 subunit alpha n=23 Tax=Oomycot...	[more]
M4BE66_HYAAE	7.880e-267	71.90	T-complex protein 1 subunit alpha n=8 Tax=Oomycota...	[more]
A0A7S2BQP8_9STRA	1.060e-265	70.52	T-complex protein 1 subunit alpha n=1 Tax=Florenci...	[more]
A0A7S1TNK3_9STRA	5.180e-264	72.27	T-complex protein 1 subunit alpha (Fragment) n=1 T...	[more]
A0A7S2UZQ7_9STRA	4.420e-263	72.03	T-complex protein 1 subunit alpha n=1 Tax=Fibrocap...	[more]
A0A024G0Q1_9STRA	3.640e-262	72.63	T-complex protein 1 subunit alpha n=2 Tax=Albugo c...	[more]
A0A1W0A1E9_9STRA	7.550e-259	73.04	T-complex protein 1 subunit alpha n=1 Tax=Thrausto...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 23..39 score: 44.47 coord: 75..94 score: 45.99 coord: 372..394 score: 35.02 coord: 406..418 score: 43.68 coord: 45..63 score: 46.04
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 2..550
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 18..543 e-value: 1.9E-170 score: 569.9
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 3..543
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 210..368 e-value: 1.9E-170 score: 569.9
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 205..377
IPR012715	T-complex protein 1, alpha subunit	TIGRFAM	TIGR02340	TIGR02340	coord: 2..550 e-value: 1.3E-260 score: 863.6
IPR012715	T-complex protein 1, alpha subunit	CDD	cd03335	TCP1_alpha	coord: 2..546 e-value: 0.0 score: 939.786
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 130..404 e-value: 1.9E-170 score: 569.9
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 138..404
IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 21..544 e-value: 6.4E-155 score: 516.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 547..566
None	No IPR available	PANTHER	PTHR11353:SF84	T-COMPLEX PROTEIN 1 SUBUNIT ALPHA	coord: 2..550
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 75..83
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 26..38
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 47..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig65	contig	P-littoralis_Contig65:485440..494415 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig65.86.3	mRNA_P-littoralis_Contig65.86.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig65 485440..495304 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig65.86.3 ID=prot_P-littoralis_Contig65.86.3|Name=mRNA_P-littoralis_Contig65.86.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=567bp
MGDRTMGQDVRTQNVTAATAIANIVKSSLGPVGLDKMLVDEVGDVTITND
GATILKQLDVEHPAAKVLVELADLQDQEVGDGTTSVVIVAAELLKRANEL
IKNNIHPTTVMAGYRLALKEAVKYIKANLCVPVDKLGRPNLVNAAKTAMS
SKILGPESSFFAEMAVDAVTAVRTESGGDLGKKARKHYPVSAVHILKCHG
LSLLDSKVEPGYALNCVRASQGMPTSVQNAKVVCLDINLQRYKMQMGVQV
VVNDVKEVDAIRQREMDITKERIEKILSAGATVVLTTKGIDDLCLKYFVE
AGAMAVRRVKKEDMRRIAKATGASIVTTLADMEGNETFDPEVLGEAEEVS
EQRVGDGELIFFKGTKTQASCTIVLRGANDFMLDEMDRALHDALMVIKRM
LESNVLVAGGGAVETALSIYLESFATTLGSREQLAIAEFAEALLVIPKTL
AVNAAQQDATELVAKLRAYHNTSQLQEDKASKICCRLCYYATEYRNYGLE
LVEGKVRDNLACGVVEPAISKIKSLRFATEAAITILRIDDMIKLDKQEQE
DPRARRGGGMGGMPGM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR027413	GROEL-like_equatorial_sf
IPR027409	GroEL-like_apical_dom_sf
IPR012715	Chap_CCT_alpha
IPR027410	TCP-1-like_intermed_sf
IPR002423	Cpn60/GroEL/TCP-1
IPR002194	Chaperonin_TCP-1_CS