prot_P-littoralis_Contig65.132.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig65.132.2
Unique Nameprot_P-littoralis_Contig65.132.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length235
Homology
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BLAST of mRNA_P-littoralis_Contig65.132.2 vs. uniprot
Match: D8LQG8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQG8_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 1.050e-96
Identity = 157/224 (70.09%), Postives = 177/224 (79.02%), Query Frame = 0 
Query:   17 RPVSSFLPPATHPGAGIATTLSGSTYQQRHAHTVLVRPRDALVV---MAEVDADMDIPGIADARLAGWRAAGKAASS---DGTTTADTSPAPEGNDDESGEPGCGDVVEYPLSDLVKKESDDDRQRGVAVIVSINKLRNDAWKLPEDILDKAELQVLCPDLDSDEEGVWMADELENCAFARLGEMKVLKSSFNGAMDKWKRWTISDELSEGCGARDSEWDYDML 234
            RP + F+  A  P AG A   +G+ ++QRH   V  RP  A V+   MAEVDAD  +PGIAD+RLAGWR   K A++   + T   D+    EG   ESGEPGCGDVVEYPL+DLVK ES D R++GVAVIVSINKLRNDAWKLPEDILDKAELQVLCPDLDS+EEGVWMADELE CAFA+LGEMKVLKSSFNGAMDKWKRWTISDELSEGCGARD+EW+YDML
Sbjct:   17 RPATPFIRLA--PPAGAADP-AGAAHRQRHVRPVSARPHHARVLVNMMAEVDAD--VPGIADSRLAGWRVGSKQAATTATEDTAAVDSDADSEGGAGESGEPGCGDVVEYPLTDLVKNESTDGREKGVAVIVSINKLRNDAWKLPEDILDKAELQVLCPDLDSEEEGVWMADELETCAFAKLGEMKVLKSSFNGAMDKWKRWTISDELSEGCGARDAEWEYDML 235
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BLAST of mRNA_P-littoralis_Contig65.132.2 vs. uniprot
Match: A9TNT3_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9TNT3_PHYPA)

HSP 1 Score: 80.9 bits (198), Expect = 1.230e-14
Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 0 
Query:  108 ESGEPGCG------DVVEYPLSDLVKKESDDDRQRGVAVIVSINKLRNDAWKLPEDILDKAELQVLCPDLDSDEEGVWMADELENCAFARLGEMKVLKSSFNGAMDKWKRWTISDELSEGC 222
            E+GE  CG      DVVEYPLSD +K +  DDR +GV ++VS N  R D  KL  + L   E++ L  + +S    VW AD +E  AFA L ++++L++ FN   D+W    + D+LS  C
Sbjct:  137 ENGESVCGTEAQNGDVVEYPLSDAIKAQHQDDRLKGVGLVVSRNIDRGDRDKLSVENLTLVEIEPLYREPNS---SVWRADPMEGAAFASLPDLRILRTEFNRVTDEW---IVLDDLSLDC 251
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.132.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQG8_ECTSI1.050e-9670.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A9TNT3_PHYPA1.230e-1440.50Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig65contigP-littoralis_Contig65:674001..677936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig65.132.2mRNA_P-littoralis_Contig65.132.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig65 672503..678068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig65.132.2 ID=prot_P-littoralis_Contig65.132.2|Name=mRNA_P-littoralis_Contig65.132.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=235bp
MGCTARAAAFLFFLAHRPVSSFLPPATHPGAGIATTLSGSTYQQRHAHTV
LVRPRDALVVMAEVDADMDIPGIADARLAGWRAAGKAASSDGTTTADTSP
APEGNDDESGEPGCGDVVEYPLSDLVKKESDDDRQRGVAVIVSINKLRND
AWKLPEDILDKAELQVLCPDLDSDEEGVWMADELENCAFARLGEMKVLKS
SFNGAMDKWKRWTISDELSEGCGARDSEWDYDML*
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