prot_P-littoralis_Contig65.102.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig65.102.1
Unique Nameprot_P-littoralis_Contig65.102.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length85
Homology
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BLAST of mRNA_P-littoralis_Contig65.102.1 vs. uniprot
Match: A0A6H5KY01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY01_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.580e-47
Identity = 77/83 (92.77%), Postives = 81/83 (97.59%), Query Frame = 0 
Query:    1 MSDSDFGAVSLYLGLLDITDEAWTTANLSDDEIDLPDGHDVVVDDGEVDLGESIEAAEQEDLKWTDKGIDLLLQREGGAPTAS 83
            MSDSDFGAVSLY G LDITDEAWTTA+LSDDEIDLP+GHDVVVDDGEVDLGESIEAAEQE+LKWTDKGIDLLLQREGGAPTA+
Sbjct:    1 MSDSDFGAVSLYAGFLDITDEAWTTADLSDDEIDLPEGHDVVVDDGEVDLGESIEAAEQEELKWTDKGIDLLLQREGGAPTAN 83
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BLAST of mRNA_P-littoralis_Contig65.102.1 vs. uniprot
Match: A0A7S2WQH2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQH2_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 2.440e-5
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = 0 
Query:    1 MSDSDFGAVSLYLGLLDITDEAWTTANLSDDEIDLPDGHDVVVDDGEVDLGESIEAAEQEDLKWTDKGIDLLLQRE--GGAPTA 82
            MSDS F     Y   LD+ D+ W    L DDE+ LP GH++ VDD + D   S E + +++  W D  +D+++     GG+P A
Sbjct:   36 MSDSCFALAVGYQLFLDVIDDEWRRDKLEDDEVILPPGHELPVDDAD-DASISSEGSSKDEEAWNDL-LDVVVSESVRGGSPGA 117
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY01_9PHAE1.580e-4792.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WQH2_9STRA2.440e-536.90Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig65contigP-littoralis_Contig65:532158..545027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig65.102.1mRNA_P-littoralis_Contig65.102.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig65 531445..545086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig65.102.1 ID=prot_P-littoralis_Contig65.102.1|Name=mRNA_P-littoralis_Contig65.102.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=85bp
MSDSDFGAVSLYLGLLDITDEAWTTANLSDDEIDLPDGHDVVVDDGEVDL
GESIEAAEQEDLKWTDKGIDLLLQREGGAPTASN*
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