prot_P-littoralis_Contig645.31.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig645.31.2
Unique Nameprot_P-littoralis_Contig645.31.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length276
Homology
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BLAST of mRNA_P-littoralis_Contig645.31.2 vs. uniprot
Match: A0A6H5JNX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX1_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 7.260e-62
Identity = 108/216 (50.00%), Postives = 138/216 (63.89%), Query Frame = 0 
Query:   63 NIFAATTTPSKRSASDTKREVVGNCIVPACNGANVSRRSPTFGGCSNFEKSGCKFKISILTAPSVCITCHGSINPGVKCLGVPHPTAERGPTGRVVYINNHLEWDQRLVARIAV--RGKHVCKFVEPAEKGDERVEKPCERCSDLIAVGDFVISTYHPAPVAVGNNPTPPASNPLHAKLCARAVFDDNVNQFVDSMLFEGVP-DKAVDAATLDFDF 275
            NIFAAT   SKR  +    EV+G C    C+ A V+R S TFGGC N+  SGC++KISIL+A + C+TC   +NPGV CLGVP+    +   G+  Y+N HL W+  L  ++ +   GK   KF+E  ++ D R+  PC RC+D I  GDFVISTY P       NP P A+NPLHAK CARAVFDDN  QFVD+M+ EG+  DK V A ++DFDF
Sbjct:    5 NIFAATPPSSKRKTA----EVLGKCA--RCDNAEVTRCSATFGGCENYNSSGCRYKISILSAAARCVTCLADVNPGVLCLGVPNLKGTKNTRGKTAYVNTHLRWEDCLGQKVKLGKEGKSAFKFIERVDQEDSRIGVPCARCTDEIVEGDFVISTYQPD----AENPLP-ANNPLHAKGCARAVFDDNHEQFVDNMMLEGISSDKVVSADSIDFDF 209
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig645.31.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNX1_9PHAE7.260e-6250.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig645contigP-littoralis_Contig645:115835..131576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig645.31.2mRNA_P-littoralis_Contig645.31.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig645 115539..138052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig645.31.2 ID=prot_P-littoralis_Contig645.31.2|Name=mRNA_P-littoralis_Contig645.31.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=276bp
MPRFFPERLLPEGRAVPRWRDTGRERERERGLERGRERGKEPSEGREESK
GSWLTRDTYSPENIFAATTTPSKRSASDTKREVVGNCIVPACNGANVSRR
SPTFGGCSNFEKSGCKFKISILTAPSVCITCHGSINPGVKCLGVPHPTAE
RGPTGRVVYINNHLEWDQRLVARIAVRGKHVCKFVEPAEKGDERVEKPCE
RCSDLIAVGDFVISTYHPAPVAVGNNPTPPASNPLHAKLCARAVFDDNVN
QFVDSMLFEGVPDKAVDAATLDFDF*
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