prot_P-littoralis_Contig644.24.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig644.24.1
Unique Nameprot_P-littoralis_Contig644.24.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length39
Homology
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BLAST of mRNA_P-littoralis_Contig644.24.1 vs. uniprot
Match: D7FSL8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL8_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 7.490e-7
Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 0 
Query:    3 EFCSGHAKDGMVDVKKKRCNHRGCTKLAKLSVVGNK 38
            EFCS HAK GM++V+KKRC H GCTK       G+K
Sbjct:    4 EFCSQHAKPGMINVRKKRCCHPGCTKKPSFGTAGSK 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig644.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSL8_ECTSI7.490e-758.33EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 1..36
e-value: 5.5E-7
score: 31.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig644contigP-littoralis_Contig644:78827..78943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig644.24.1mRNA_P-littoralis_Contig644.24.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig644 78796..79173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig644.24.1 ID=prot_P-littoralis_Contig644.24.1|Name=mRNA_P-littoralis_Contig644.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=39bp
MAEFCSGHAKDGMVDVKKKRCNHRGCTKLAKLSVVGNK*
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