prot_P-littoralis_Contig642.31.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig642.31.4
Unique Nameprot_P-littoralis_Contig642.31.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length340
Homology
BLAST of mRNA_P-littoralis_Contig642.31.4 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 512 bits (1318), Expect = 7.490e-172
Identity = 266/337 (78.93%), Postives = 296/337 (87.83%), Query Frame = 0
Query:    3 QQSQEGDVSSLTVGTMTFKEAFLYYVEYIAKATQGDGAGEAFMEKYVAQPRLPEHARYGKAKEMVEKKLRISGESMCGTWRQEFRDTILRYPHYGYHYVAKDDASFSDDRCSACNRVNRTRVVAFLSGSEYDPNRVWDGLRWDKHLPKHWDNPAAMAISKREAQVKHYLGDTCKHKSHLFHSLTHYKLYLVSKVAAKVRGDGGLEPENFRGKGGPQITKSAKKRCLNFSENEYESLTSLLDKADDLNGVRWGAKAGVRGGHGKTFLQAGAASSILDWLSCEAPLEQLGPGFSGEGXXXXXXXXXXXXXXXXXXXXXFHVGRGRRWRTVGSSGGGRYG 339
            +QS++G VSSL+VGTMTFKEAFL+YVEYIAKATQGDGAGEAFM+KYVAQPR+PEHARYGKAKEMVEKKLRISGES+CG+WRQ+FRDTI+RYPHYGYH+V  D    +D RCSACNR NRT V+AFLSGSEYDPNRVWDGLRWDKHLP+HWD+P A A++K+EA+  HYLGDTCKHKSHLFHSLTHYKLYLVSKV+AK+RGD GLEPENFRG+GGPQ +K  KKRCLNFSENE+ESL++LL KADDLNGV+WG +AGVRGGHGKTFL+ GAASSILDWLS EA   Q G    GE       XXXXXXXXXXXXXXX  VGRGRRWRTVGSS G RYG
Sbjct:  644 EQSEDGGVSSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLND-RCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGE-LEGQGPXXXXXXXXXXXXXXXXDVGRGRRWRTVGSSSG-RYG 977          
BLAST of mRNA_P-littoralis_Contig642.31.4 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 5.870e-94
Identity = 152/203 (74.88%), Postives = 170/203 (83.74%), Query Frame = 0
Query:  137 RVWDGLRWDKHLPKHWDNPAAMAISKREAQVKHYLGDTCKHKSHLFHSLTHYKLYLVSKVAAKVRGDGGLEPENFRGKGGPQITKSAKKRCLNFSENEYESLTSLLDKADDLNGVRWGAKAGVRGGHGKTFLQAGAASSILDWLSCEAPLEQLGPGFSGEGXXXXXXXXXXXXXXXXXXXXXFHVGRGRRWRTVGSSGGGRYG 339
            +VWDGLRWDKHLP+HWD+P A A++K+EA+  HYLGDTCKHKSHLFHSLTHYKLYLVSKV+AK+RGD GLEPENFRG+GGP  +K  KKRCLNFSENE+ESL++LL KADDLNGV+WG +AGVRGGHGKTFL+ GAASSILDWLS EA   Q G    G+           XXXXXXXXXXXFHVGRGRRWRTVGSSGG RYG
Sbjct:   58 KVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGD--LEGQRAGLGXXXXXXXXXXXFHVGRGRRWRTVGSSGG-RYG 257          
BLAST of mRNA_P-littoralis_Contig642.31.4 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 2.130e-67
Identity = 111/136 (81.62%), Postives = 126/136 (92.65%), Query Frame = 0
Query:    3 QQSQEGDVSSLTVGTMTFKEAFLYYVEYIAKATQGDGAGEAFMEKYVAQPRLPEHARYGKAKEMVEKKLRISGESMCGTWRQEFRDTILRYPHYGYHYVAKDDASFSDDRCSACNRVNRTRVVAFLSGSEYDPNRV 138
            +QS++G +SSL+VGTMTFKEAFL+YVEYIAKATQGDGAGEAFM+KYVAQPR+PEHARYGKAKEMVEKKLRISGES+CG+WRQ+FRDTI+RYPHYGYH+V  D    +D RCSACNR NRT V+AFLSGSEYDPNRV
Sbjct:  672 EQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTD-RCSACNRSNRTSVIAFLSGSEYDPNRV 806          
BLAST of mRNA_P-littoralis_Contig642.31.4 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 3.820e-15
Identity = 67/208 (32.21%), Postives = 101/208 (48.56%), Query Frame = 0
Query:   27 YVEYIAKATQGDGAGEAFMEKYVAQPRLPEHA--RYGKAKEMVEKKLRISGESMC--GTWRQEFRDTILRYPHYGYHY-VAKDDASFSDDR----------------CSACNRVNRTRV-VAFLSGSEYDPNRVWDGLRWDKHLPKHWDNPAAMAISKREAQVKHYLGDTCKHKSHLFHSLTHYKLYLVSKVAAKVRGDGGLEPENFR 212
            Y+E++AKA QG G G AFMEK+ ++     HA   Y KA +  E ++    ES+   G+W QEF   +  YP  G+H+ V+ +  +  DD                 C+AC+R  R  +   +L+GS         G +                 SK++ + +  LG  C++KSHL+H+L HYKLYLV KV   +    G+ PE+ R
Sbjct:  940 YLEFLAKAVQGGGKGAAFMEKFDSK----RHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHFGVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSR-------GGYK-----------------SKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKVREHMDTT-GVGPEDLR 1118          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig642.31.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KKK5_9PHAE7.490e-17278.93DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T8_ECTSI5.870e-9474.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8T9_ECTSI2.130e-6781.62DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLB0_ECTSI3.820e-1532.21RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..339
IPR025451Domain of unknown function DUF4211PFAMPF13926DUF4211coord: 19..136
e-value: 2.5E-7
score: 30.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig642contigP-littoralis_Contig642:147719..156490 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig642.31.4mRNA_P-littoralis_Contig642.31.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig642 146377..156527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig642.31.4 ID=prot_P-littoralis_Contig642.31.4|Name=mRNA_P-littoralis_Contig642.31.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp
MEQQSQEGDVSSLTVGTMTFKEAFLYYVEYIAKATQGDGAGEAFMEKYVA
QPRLPEHARYGKAKEMVEKKLRISGESMCGTWRQEFRDTILRYPHYGYHY
VAKDDASFSDDRCSACNRVNRTRVVAFLSGSEYDPNRVWDGLRWDKHLPK
HWDNPAAMAISKREAQVKHYLGDTCKHKSHLFHSLTHYKLYLVSKVAAKV
RGDGGLEPENFRGKGGPQITKSAKKRCLNFSENEYESLTSLLDKADDLNG
VRWGAKAGVRGGHGKTFLQAGAASSILDWLSCEAPLEQLGPGFSGEGGGG
GAGAGPGEMEEESEDEEEFHVGRGRRWRTVGSSGGGRYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025451DUF4211