prot_P-littoralis_Contig631.41.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig631.41.1
Unique Nameprot_P-littoralis_Contig631.41.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length94
Homology
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BLAST of mRNA_P-littoralis_Contig631.41.1 vs. uniprot
Match: A0A6H5L612_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L612_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.400e-26
Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 0 
Query:    1 HCSFEVAGQALAIEGGWSVDLVERAFSAGDSEQLTRLRAALRRLTVSVLNGSENPAITDDMGGLQTARDEDAIRRLALDYRQHIRNPDDFRNVV 94
            HC  EV  QA AIE GW +DLVERAFSAGDSE+L R+R ALR LT+ V N +ENP +    GG +TA ++  IRRLAL++RQ + N DDFR+ V
Sbjct:   13 HCWLEVVAQACAIEEGWGIDLVERAFSAGDSERLFRVRTALRHLTIKVFNLTENPNVLQGFGGPRTACNQRDIRRLALNFRQDVTNADDFRDTV 106
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BLAST of mRNA_P-littoralis_Contig631.41.1 vs. uniprot
Match: D7G3R9_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R9_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 9.430e-24
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 0 
Query:    1 HCSFEVAGQALAIEGGWSVDLVERAFSAGDSEQLTRLRAALRRLTVSVLNGSENPAITDDMGGLQTARDEDAIRRLALDYRQHIRNPDDFRNVV 94
            HC  EV  Q  AI  GW+ DLVERAF+ GD E+L R+R A+R LT+ V N ++NP I + + G +TA DEDAIRRLAL++ Q   N DDFR+V+
Sbjct:  397 HCWLEVVAQGYAIGEGWAPDLVERAFTNGDRERLFRIRTAIRSLTIKVFNVTKNPLIREGLDGPETACDEDAIRRLALNFHQDPTNMDDFRSVI 490
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig631.41.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L612_9PHAE1.400e-2658.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3R9_ECTSI9.430e-2454.26Helicase_C_4 domain-containing protein n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig631contigP-littoralis_Contig631:143750..144031 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig631.41.1mRNA_P-littoralis_Contig631.41.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig631 143750..144032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig631.41.1 ID=prot_P-littoralis_Contig631.41.1|Name=mRNA_P-littoralis_Contig631.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=94bp
HCSFEVAGQALAIEGGWSVDLVERAFSAGDSEQLTRLRAALRRLTVSVLN
GSENPAITDDMGGLQTARDEDAIRRLALDYRQHIRNPDDFRNVV
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