prot_P-littoralis_Contig63.104.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig63.104.1
Unique Nameprot_P-littoralis_Contig63.104.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length132
Homology
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BLAST of mRNA_P-littoralis_Contig63.104.1 vs. uniprot
Match: D7FI22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI22_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 7.350e-23
Identity = 59/102 (57.84%), Postives = 73/102 (71.57%), Query Frame = 0 
Query:   22 SSLSNEEVEAVVAYVGMDEFGGVHAEEFRHVISAAKKGNIPDAHVADCVRRIDGMLRLRRLSIRDVFRKLNSDGSGKLSREELAQRVRELSGHDRARVIQRR 123
            SSL+ EEVEAV+ YV  D+ G V A +F+  ISAAK+G IPD  +A  +RRI+ MLRL  L IRDVF  ++SDGSGKLS  ELAQ +  L  HDR +VI+RR
Sbjct:  206 SSLTLEEVEAVIVYVDKDQSGEVDARDFQAAISAAKQGKIPDQGLAGSIRRINDMLRLHNLRIRDVFHVMDSDGSGKLSHRELAQGLSLLYEHDRDKVIERR 307
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BLAST of mRNA_P-littoralis_Contig63.104.1 vs. uniprot
Match: A0A6H5JFH1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFH1_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 1.570e-6
Identity = 31/57 (54.39%), Postives = 37/57 (64.91%), Query Frame = 0 
Query:   66 VADCVRRIDGMLRLRRLSIRDVF------RKLNSDGSGKLSREELAQRVRELSGHDR 116
            +A C+RRI+ MLRL  L IRDVF      R  +SDGSGKLS  EL Q + +L  HDR
Sbjct:    1 MAGCIRRINDMLRLHNLRIRDVFHVMVRGRMPDSDGSGKLSHRELTQGLSQLYEHDR 57
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig63.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI22_ECTSI7.350e-2357.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFH1_9PHAE1.570e-654.39Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 8..129
e-value: 1.3E-8
score: 36.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 79..114
score: 10.663839
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 23..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig63contigP-littoralis_Contig63:482113..484549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig63.104.1mRNA_P-littoralis_Contig63.104.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig63 482113..484549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig63.104.1 ID=prot_P-littoralis_Contig63.104.1|Name=mRNA_P-littoralis_Contig63.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=132bp
GRGREAAAGASGGRRESDVAPSSLSNEEVEAVVAYVGMDEFGGVHAEEFR
HVISAAKKGNIPDAHVADCVRRIDGMLRLRRLSIRDVFRKLNSDGSGKLS
REELAQRVRELSGHDRARVIQRRKDERGRRRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair