prot_P-littoralis_Contig622.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig622.11.1
Unique Nameprot_P-littoralis_Contig622.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length632
Homology
BLAST of mRNA_P-littoralis_Contig622.11.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 5.130e-69
Identity = 153/491 (31.16%), Postives = 258/491 (52.55%), Query Frame = 0
Query:  102 QPVSQPTEPSSRLIIGG----VPVQVVGAGKGRSKQTSAIWKHVVEFTPATASGKNIKCMVKHKLPAVNNVPAREVTCGFLMKYVRADASKGISSGGTNGMWKHFRDKHKHIREEEMPKSSHSTEGKKRKASLLAGVQQAQAS--------AGKGPMDKHMITSLGKAQQEEQNRRYVAMCAVDFRPFSMFDSPAFRWYLGGFSPAYIQNPMHATTIDGHLDQLCLDVRSAMTAKLTEQYESVQAAGWNGPWISIQCDATSTNNCEYFTVSFSWIPPDFSGMERVAFCTKEFPGRHTAEKIEPWLRQVTVDAFGGIVGAEHCEPSNIYISATVDQGGNMINAFRAMGVPTLICSGHRLNSAVQWATGIGGSFKSDGSGTCKNRLGHELVRKATAMVGHCSHSVCNNDEFKKVQEELEEMCKLLELIRRNDTRWASLHAMLQRVLRLYRALVEYFN-RCGSDRALFPTEWQAVQQVVSVLDDAAATAAQVQG 579
            +P  Q +  S  ++  G    + V ++    G+ + T+  W+ +  FTP+  + KN+ C+VK K            TC  LMK+  ++  +  S  GT G+ KH    H    ++   +     E K+   + +AG   A +S        +    +  +M+  L K ++E  + R+V  C ++ RP  M     F+ +LG  SP Y+++ M   T D +LD L   V++++   L    E     G++G ++  Q D T+    EY T + S++    + + RVA   + FPG HTA+ I PW+ ++T + F   +G E  EP +++++ TVDQGGN++NA +A+GVP + C+ HR+N+AV WA GI G+ +       +N++  +L++K  A+VG  SHS  NND+ K++Q   E++  + +LIRRNDTRW S   M+ R+L L + + EYF  +  + R L   EW    +V S+L D +    ++QG
Sbjct:   46 EPELQSSSESRTMVNAGRGQSISVTLMEPQYGKRRLTAWCWQVMSRFTPSI-NDKNVVCLVKKK---------DGTTCNHLMKWTPSEGKQRGS--GTTGLTKHIEKFHPTTAQKIKEEEGTQAERKESIQAAIAGDSSAGSSTALPSASASSSSSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMG-EDVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR-------RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQRLEEDLHAVYQLIRRNDTRWTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQG 516          
BLAST of mRNA_P-littoralis_Contig622.11.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 6.620e-67
Identity = 160/482 (33.20%), Postives = 246/482 (51.04%), Query Frame = 0
Query:  119 VPVQVVGAGKGRSKQTSAIWKHVVEFTPATASGKNIKCMVKHKLPAVNNVPAREVTCGFLMKYVRADASKGISSGGTNGMWKHFRDKHKHIREEEMPKSSHSTEGKKRKASLLA----------GVQQAQASAGKGPMDKHMITS--LGKAQQEEQNRRYVAMCAVDFRPFSMFDSPAFRWYLGGFSPAYIQNPMHATTIDGHLDQLCLDVRSAMTAKLTEQYESVQAAGWNGPWISIQCDATSTNNCEYFTVSFSWIPPDFSGMERVAFCTKEFPGRHTAEKIEPWLRQ--------VTVDAFGGIVGAEHCEPSNIYISATVDQGGNMINAFRAMGVPTLICSGHRLNSAVQWATGIGGSFKSDGSGTCKNRLGHELVRKATAMVGHCSHSVCNNDEFKKVQEELEEMCKLLELIRRNDTRWASLHAMLQRVLRLYRALVEYF-NRCGSDRALFPTEWQAVQQVVSVLDDAAATAAQVQG 579
            V V +V    G+  + S +W+   EF P   +GKN+ CM                 C  LM +  AD        GT GM  H++ KH  + +  M   + + +G+   A+ +A          G  + +A +    +  +M T   L  + +   NRR+V  CA++ RP +M     ++ ++G   P Y+++ M   T +  L  +  +   A+   L    ES    G+ GP++  Q D T+  N EY T S S+I    + + RV   T+ FPG HTA  IEPW+ +        +T + F  ++G E+ +P +++++ TVDQGGN++NA R + V  L C+ HRLNS   WA GI GS +     T +N    +L+++  A+VG  SHS  NNDE K +Q   EE   + ELIRRNDTRWAS HAM+ R+L+L +A+VEYF +   ++R L   EW    +V S+LD  A    ++QG
Sbjct:   58 VVVTIVPQTSGKKTKRSWVWQVCREFKPLI-NGKNVFCMA----------------CKHLMLWKPAD--------GTGGMSSHYKKKHPALYKALMDDHTTTAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTPSIKDYMQTGNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMG-ENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIR-----TGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQG 508          
BLAST of mRNA_P-littoralis_Contig622.11.1 vs. uniprot
Match: A0A6H5KAN7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN7_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 4.760e-35
Identity = 81/185 (43.78%), Postives = 117/185 (63.24%), Query Frame = 0
Query:  396 QVTVDAFGGIVGAEHCEPSNIYISATVDQGGNMINAFRAMGVPTLICSGHRLNSAVQWATGIGGSFKSDGSGTCKNRLGHELVRKATAMVGHCSHSVCNNDEFKKVQEELEEMCKLLELIRRNDTRWASLHAMLQRVLRLYRALVEYF-NRCGSDRALFPTEWQAVQQVVSVLDDAAATAAQVQG 579
            Q+T + F  ++G E+ +P +++++ TVDQGGN++NA R + V  L C+ HRLNS   WA GI GS +     T +N    +L+++  A+VG  SHS  NNDE K +Q   EE   + ELIRRNDTRWAS HAM+ R+L+L +A+VEYF +   ++R L   EW    +V S+LD  A    ++QG
Sbjct:    2 QLTTEFFADMMG-ENVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIR-----TGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYELIRRNDTRWASQHAMMVRLLKLKKAIVEYFRDNENNNRKLSSREWTVTNEVCSLLDVVAEVTVKIQG 180          
BLAST of mRNA_P-littoralis_Contig622.11.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.850e-26
Identity = 66/186 (35.48%), Postives = 106/186 (56.99%), Query Frame = 0
Query:  318 RSAMTAKLTEQYESVQAAGWNGPWISIQCDATSTNNCEYFTVSFSWIPPDFSGMERVAFCTKEFPGRHTAEKIEPWLRQVTVDAFGGIVGAEHCEPSNIYISATVDQGGNMINAFRAMGVPTLICSGHRLNSAVQWATGIGGSFKSDGSGTCKNRLGHELVRKATAMVGHCSHSVCNNDEFKKVQE 503
            ++++ A+L E YE ++  G++ P   +   +T+  + ++       +    S    ++  TK F G+HT   I+ WL Q+T   F  IV A    PS++Y++ATVDQG N++NA +++G+PT+ C GHR++S+V W  G+ GS       T KN+ G  LV +  A  G  SHS  N+D F+ VQE
Sbjct:    6 KTSLVAQLKEAYEELKKIGYHLPRPVLL--STAGLDIDWHRRVLHSLGVGDSLPVHLSLATKVFRGQHTQATIKTWLEQLTTGVFQSIVPA--VVPSDVYVAATVDQGLNVVNACKSLGIPTIPCLGHRIHSSVMWGIGVSGSVA-----TQKNKKGRVLVGRCAACAGMFSHSCTNSDAFRLVQE 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig622.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JRT6_9PHAE5.130e-6931.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ52_9PHAE6.620e-6733.20Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KAN7_9PHAE4.760e-3543.78Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D7G7X8_ECTSI2.850e-2635.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 498..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..227
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 339..578

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig622contigP-littoralis_Contig622:120758..124058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig622.11.1mRNA_P-littoralis_Contig622.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig622 119275..124265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig622.11.1 ID=prot_P-littoralis_Contig622.11.1|Name=mRNA_P-littoralis_Contig622.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=632bp
MCTVGSRLPVRDALRCPAGDTHTHPTKNKESIVKSKIFLFRNSSIEESRI
ATFEPFSNLFPFSFFLFRIFIRFCCGDARYHVRGSTTNTHSMADPTGGGA
AQPVSQPTEPSSRLIIGGVPVQVVGAGKGRSKQTSAIWKHVVEFTPATAS
GKNIKCMVKHKLPAVNNVPAREVTCGFLMKYVRADASKGISSGGTNGMWK
HFRDKHKHIREEEMPKSSHSTEGKKRKASLLAGVQQAQASAGKGPMDKHM
ITSLGKAQQEEQNRRYVAMCAVDFRPFSMFDSPAFRWYLGGFSPAYIQNP
MHATTIDGHLDQLCLDVRSAMTAKLTEQYESVQAAGWNGPWISIQCDATS
TNNCEYFTVSFSWIPPDFSGMERVAFCTKEFPGRHTAEKIEPWLRQVTVD
AFGGIVGAEHCEPSNIYISATVDQGGNMINAFRAMGVPTLICSGHRLNSA
VQWATGIGGSFKSDGSGTCKNRLGHELVRKATAMVGHCSHSVCNNDEFKK
VQEELEEMCKLLELIRRNDTRWASLHAMLQRVLRLYRALVEYFNRCGSDR
ALFPTEWQAVQQVVSVLDDAAATAAQVQGVVMGLSASPSTTSSSCTTRSA
PQTRTFDAWIPGTAPKHQSPRASFNRSRGHY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf