prot_P-littoralis_Contig612.21.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig612.21.1
Unique Nameprot_P-littoralis_Contig612.21.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length114
Homology
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BLAST of mRNA_P-littoralis_Contig612.21.1 vs. uniprot
Match: D8LBW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBW8_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.000e-11
Identity = 46/84 (54.76%), Postives = 53/84 (63.10%), Query Frame = 0 
Query:   10 CGYLAPLGCVARPMLASCRTRLLRRPQACAVRRLGSPIAIPSP-------VSLVIFHRHGDRSPLRGHTPDEELALK-APAPAA 85
            CG+L PL  V  PM A   TRLLR   A   R +G P+   +        +SL++FHRHGDRSPLRGHTPDEELAL  A APAA
Sbjct:   11 CGHLTPLSYV-HPMFAPQSTRLLRGLHA---RGVGRPLCSKASGSETQGLLSLLVFHRHGDRSPLRGHTPDEELALPTAAAPAA 90
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig612.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBW8_ECTSI2.000e-1154.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig612contigP-littoralis_Contig612:101034..102176 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig612.21.1mRNA_P-littoralis_Contig612.21.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig612 101034..102203 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig612.21.1 ID=prot_P-littoralis_Contig612.21.1|Name=mRNA_P-littoralis_Contig612.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp
MKMFPALGRCGYLAPLGCVARPMLASCRTRLLRRPQACAVRRLGSPIAIP
SPVSLVIFHRHGDRSPLRGHTPDEELALKAPAPAASAALAEEAAAGGSAR
ASGAFGRASGAAGG
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