prot_P-littoralis_Contig605.21.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig605.21.4
Unique Nameprot_P-littoralis_Contig605.21.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1370
Homology
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BLAST of mRNA_P-littoralis_Contig605.21.4 vs. uniprot
Match: A0A6H5KS89_9PHAE (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS89_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 1.410e-57
Identity = 120/177 (67.80%), Postives = 138/177 (77.97%), Query Frame = 0 
Query: 1063 DAIPSEELVERWMRVVLGPRALGLIEDEESCDXXXXXXXXXXNSGGV-AGRRGLAEKLKDGRLLVRLARAVGGARSIGIAEDLEATTPMMQLVNVHAFMAAARAIGVPSTSLFNPKDLVDGPHGGDCSPAVLKCLAALSDAVRKNAALDPPRDAYNGPLLGDKEGDYDPAVMNNNRS 1238
            D IPSE+LVE+W+R VLGPRALGL+E++   D          + G V +G RGL E+LKDGRLLVRLA AVGGAR+   AEDLEATTPM+QLVNVHAFMAAARAIGVP+TSLF+ KDLVDGP GG CSPAVLKCL+ALSDA R+NA++DPP  AY+GPLLGD E DYD      N S
Sbjct: 1136 DGIPSEQLVEKWIRAVLGPRALGLVEEKRDYD----------DDGPVGSGGRGLGEELKDGRLLVRLAHAVGGARAASCAEDLEATTPMLQLVNVHAFMAAARAIGVPATSLFHAKDLVDGPPGGPCSPAVLKCLSALSDAARRNASIDPPGTAYDGPLLGDGESDYDAKTTEENGS 1302
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BLAST of mRNA_P-littoralis_Contig605.21.4 vs. uniprot
Match: D7G3I0_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I0_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 6.280e-56
Identity = 117/177 (66.10%), Postives = 137/177 (77.40%), Query Frame = 0 
Query: 1063 DAIPSEELVERWMRVVLGPRALGLIEDEESCDXXXXXXXXXXNSGGV-AGRRGLAEKLKDGRLLVRLARAVGGARSIGIAEDLEATTPMMQLVNVHAFMAAARAIGVPSTSLFNPKDLVDGPHGGDCSPAVLKCLAALSDAVRKNAALDPPRDAYNGPLLGDKEGDYDPAVMNNNRS 1238
            D IPSE++V++W+R VLGPRALGL+E++   D          + G V +G RGL E+LKDGRLLVRLA AVGGAR+ G AEDLEATTPM+QLVNVHAFMAAARAIGVP+T LF+ KDLVDGP GG CSPAVLKC+AALSDA R+NA+ DPP  AY+GPLLGD+E DY       N S
Sbjct: 1095 DGIPSEQMVKKWVRAVLGPRALGLVEEDGDDD----------DDGPVGSGGRGLGEELKDGRLLVRLAHAVGGARAAGCAEDLEATTPMLQLVNVHAFMAAARAIGVPATYLFHAKDLVDGPPGGPCSPAVLKCIAALSDAARRNASTDPPGTAYDGPLLGDEESDYHAKTAEENGS 1261
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig605.21.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS89_9PHAE1.410e-5767.80Calponin-homology (CH) domain-containing protein n... [more]
D7G3I0_ECTSI6.280e-5666.10Calponin-homology (CH) domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 1067..1199
e-value: 5.9E-5
score: 32.5
IPR001715Calponin homology domainPFAMPF00307CHcoord: 1113..1202
e-value: 1.9E-7
score: 31.2
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 1065..1204
score: 10.911055
IPR036872CH domain superfamilyGENE3D1.10.418.10coord: 1066..1212
e-value: 3.8E-14
score: 54.2
IPR036872CH domain superfamilySUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 1112..1203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1089..1110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 715..844
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 963..989
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1250..1323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1028..1048
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..560
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1089..1103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 633..653
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 633..680

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig605contigP-littoralis_Contig605:81412..90862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig605.21.4mRNA_P-littoralis_Contig605.21.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig605 81188..97741 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig605.21.4 ID=prot_P-littoralis_Contig605.21.4|Name=mRNA_P-littoralis_Contig605.21.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1370bp
MSPARVRELLGDSAHGGGGGRGMNSNGEHMKAGGARRGGITRSKSLGGES
SSRFDGEGSSGSSSSSSSGGRSSRRGGGGGGARRLTRSGGSFGSLRGFML
KNPHFDRAYYDDDDYGNDSDRRSSSSKRERGGRGVGCFKANGTQKEGWRE
PAAAAGDCFPLGMMATPTRRGRAPATATALGPGTTLTKTPPASSRRHRRH
RSKESDSSLTSVESFGIVVCGAGAAAVAVAPPVAAAAAEAPALGTGLVAR
AVARVEGGPGDETVRGILARAAAKHMAGEAVSARAHLAEVRKVDGTSSRR
LPHQLVDAGTGEQRERAAGVVTPGGSLGGMGVDSVVAQPSEIIKSFSFSF
SSSSRSNSNASLATSAEGVPVQAEERAPHTAQSPSPSPTGSRLGPILSEK
VFGGWAGPAPGQRPSTLDAAAGAGAGAGAADPPPAAAAVVGVAGSVRSNG
GGGRPESSKPGVRPTASGRAGRGSSGRRGRPSWSSSGDKNAKVSRDLNGG
DTDDIEPDDDDDGRGLSVPGMRALEVVAAAAAKTVQRSSSKLSAAEAEGE
QEGSAGGLASGPNAVSRAAIAAAAAPVKWGREGAEERRAAAAAAAAATVS
SPSGADGLTELFAFDKLRRRGSRVSEYSAATSIMSGSSSTHRRGPSSALG
HASSNGGPPPVAGGGGTNGDGNARRAGINNSNHLIDRLEIRQDEEKGVEL
RGAVMMSPASAAAAVAARMSDGGNGNGNGNSNRHPPSLSHEAVQEAARLG
VATREGQGWRGDRGEAKSHEAPGELSVSLNGGNDDANGGGSRAGGEGGGD
GGDSGKARPRPLSRRKSESSVQFSGREGSLLQDGGGSGYLERGVARASSS
VELKLQQQQQQQQQQQTRHIPIGVCLDSPKLAPACPVSEEQETAPVALVR
GKKGEEDCSEADDDLSAYGVTSFGKVDPQLFFSAGAGNTKFATAKHSTTA
AEGRGSHSLYTSLSAHQSGKGVGGGGGRREAGGETISHVEAGHEFAATAE
ADVLSYRGGGGSTCSVASAYGPRSDLGFAGGGSGGGRRGREEKKRLRRRW
SKRRIRKLGGGGDAIPSEELVERWMRVVLGPRALGLIEDEESCDDDDDDD
DGNGNSGGVAGRRGLAEKLKDGRLLVRLARAVGGARSIGIAEDLEATTPM
MQLVNVHAFMAAARAIGVPSTSLFNPKDLVDGPHGGDCSPAVLKCLAALS
DAVRKNAALDPPRDAYNGPLLGDKEGDYDPAVMNNNRSYQEVAAKFGADD
APAGGGGGGGGNGGDHIFGGFVSKGGSHTKGPGVAGGRRRSDRAGSSGVG
EIPHELGGGGGGGEEGTCACIDPPHPPRAPTLMGVLFHYLDPAASRSLCT
KYLRSVYFLRGKDGEIGHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001715CH-domain
IPR036872CH_dom_sf