prot_P-littoralis_Contig604.26.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig604.26.1
Unique Nameprot_P-littoralis_Contig604.26.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length225
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig604.26.1 vs. uniprot
Match: A0A6H5L9N5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9N5_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.570e-22
Identity = 57/158 (36.08%), Postives = 98/158 (62.03%), Query Frame = 0 
Query:   60 TIVITSVAEENLYNADLFVGPHDGGTIISVTALH-EHINRLIVGTLGITVRDLGHFTRGGTPPYCMLIGLDAVLSLARQHWIYEKFSEYQKGLESVTIVKLRSRYN-SRSIVRLVWDNSESPSRSQAQVLNEREWKNSKYRGKSKAL-HGLTDVGLLI 214
            T+V+  V     +N+  +V P+D  +  +V+  H + I++LI G     VRD+G +T G   P+C+ I +  VL+L RQ W+YE+F + + G  ++T+V LRS+++  +  +R+ W+NS S   ++AQV  EREWK +K+ GK+K +  G+ DV + +
Sbjct:  135 TVVLNGVGPNGEFNS--YVSPNDDASYRAVSPGHLKGISKLISGATNCNVRDMGGYTEGAAVPFCVRISMPDVLALMRQSWVYERFCQTKCG--TMTVVVLRSQHSRGKDKLRVAWENSGSLDYTKAQVYTEREWKKTKFAGKTKTMPEGIADVDMAL 288
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig604.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9N5_9PHAE1.570e-2236.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig604contigP-littoralis_Contig604:120869..130842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig604.26.1mRNA_P-littoralis_Contig604.26.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig604 119332..132069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig604.26.1 ID=prot_P-littoralis_Contig604.26.1|Name=mRNA_P-littoralis_Contig604.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=225bp
MALARVRGQSGAAQQIAVELVHRGVAFVKRKAVRVAARTRDRLTRFMFDR
EEPPSGQPMTIVITSVAEENLYNADLFVGPHDGGTIISVTALHEHINRLI
VGTLGITVRDLGHFTRGGTPPYCMLIGLDAVLSLARQHWIYEKFSEYQKG
LESVTIVKLRSRYNSRSIVRLVWDNSESPSRSQAQVLNEREWKNSKYRGK
SKALHGLTDVGLLIHNNGRVLAFL*
back to top