prot_P-littoralis_Contig60.129.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig60.129.3
Unique Nameprot_P-littoralis_Contig60.129.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length699
Homology
BLAST of mRNA_P-littoralis_Contig60.129.3 vs. uniprot
Match: D8LGY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY1_ECTSI)

HSP 1 Score: 525 bits (1352), Expect = 1.050e-176
Identity = 285/371 (76.82%), Postives = 307/371 (82.75%), Query Frame = 0
Query:  324 ASPPSRFRAARGNPGPMRRASKASTPHRAPFRPPGVGSFLNSAWRSFLRLEGCCEASWVGKGSAHVLAGALASSHSVVAGVVVSLAVWASCARRLSGSEDDWKQVARITIEVAVLWYCHALPHGLGAGRPLRGNFGTGKAGDLLGAMWHFLGQGAFIRFVAASGRLVNLNVLEANGLLLGLSHLGNAVAGSRMRRVVGGTEVSAAXXXXXXXXXXXXXXTAHTYQLRGFFSRTNGIFGEKRLLSLPFDCADTLLALQGILSATEREVVRKNGVLASAFRDFAGQPSNTLDAHSLGAVGARNLMGMGFITARVRMFGRPALSLGWTEKASNMCMVGDPICGSLLQKLLDPTCVILKGRGHLYDAYLACVGCL 694
            ASPPSR R     PG + RA       R   R    G     A RS +   G CEA+ VGK + HV+AGALASSHSVVAG VV LAVWASCA+RL+G+EDDWKQVARITIEVA++WYCHALPHGLGAGRPLRGNFGTGKAGDLLGAMWHFLGQG FIR VAASGR+V+LNVLEANG+LLGLSHLGN +AGSRMRRVVG T     XXXXXXX        AH YQLRGFFSRTNGIFGE+ +LS+PFD ADTLLALQGILSATEREVV+KNGVLASAFRDFA Q +NTLDAHSLGAVGARNLMGMGFI ARVRMFGRPALSLGWTEKA+NMCM GDPICGSLLQKLLDPTCV+LKGRGH YDAY+ACV CL
Sbjct:  211 ASPPSRTRR----PGRIGRAKARLKRSR---RSGAHGLVSTGACRSLVAPGGWCEATSVGKATVHVVAGALASSHSVVAGFVVGLAVWASCAKRLTGAEDDWKQVARITIEVAIMWYCHALPHGLGAGRPLRGNFGTGKAGDLLGAMWHFLGQGTFIRLVAASGRVVSLNVLEANGILLGLSHLGNGLAGSRMRRVVGATAXXXXXXXXXXXE-------AHAYQLRGFFSRTNGIFGERPILSMPFDTADTLLALQGILSATEREVVQKNGVLASAFRDFAAQSANTLDAHSLGAVGARNLMGMGFIAARVRMFGRPALSLGWTEKATNMCMEGDPICGSLLQKLLDPTCVMLKGRGHFYDAYVACVACL 567          
BLAST of mRNA_P-littoralis_Contig60.129.3 vs. uniprot
Match: A0A835ZF00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF00_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.630e-79
Identity = 157/323 (48.61%), Postives = 196/323 (60.68%), Query Frame = 0
Query:  367 WRSFLRLEGCCEASWVGKGSAHVLAGALASSHSVVAGVVVSLAVWASCARRLSGSEDDWKQVARITIEVAVLWYCHALPHGLGAGRPLRGNFGTGKAGDLLGAMWHFLGQGAFIRFVAASGRLVNLNVLEANGLLLGLSHLGNAVAGSRMRRV-VGGTEVSAAXXXXXXXXXXXXXXTAHTYQLRGFFSRTNGIFGEKRLLSLPFDCADTLLALQGILSATEREVVRKNGVLASAFRDFAGQPSNTLDAHSLGAVGARNLMGMGFITARVRMFGRPALSLGWTEKASNMCMVGDPICGSLLQKLLDPTCVILKGRGHLYDAYL 688
            W  +   E    ++W  +  + VL   LAS+  ++A VVV  AV  SCA     + + W+Q AR+T+EVA+L Y H LP GLG    LR +    +   L GA  H+ GQ      VAA+ R V LN+ EAN LLLG SH+GNA AGSR+  + +GG    A                   YQLRGFF RT G+F  +R+LSLPFDC DT+L  QGILSATERE+      +  AFR +AG P + LDAHSLG +GARNL GMG + A VR+F RP +SLGWT   S++CMVGDPICGS L KLLDPTC +L G GH+Y  YL
Sbjct:  450 WSDYWFAEQLLRSAWPVRIVSDVLLSTLASASPLLASVVVGAAVCVSCA----AAGEHWQQAARVTVEVAILRYLHCLPCGLGVAAELREHTCARQLQPLAGAALHYAGQRGCAVAVAAAARRVRLNLFEANALLLGASHVGNACAGSRLWCLDLGGGSDDAVG-----------------YQLRGFFCRTRGVFAARRVLSLPFDCVDTVLGCQGILSATERELACTTSAVGEAFRAWAGAPLSVLDAHSLGTLGARNLKGMGLVAAPVRLFARPFMSLGWTHGTSSICMVGDPICGSFLAKLLDPTCCLLPGSGHIYSKYL 751          
BLAST of mRNA_P-littoralis_Contig60.129.3 vs. uniprot
Match: A0A7S1XTN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTN3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 6.500e-15
Identity = 62/168 (36.90%), Postives = 79/168 (47.02%), Query Frame = 0
Query:  501 LLGLSHLGNAVAGSRMRRVVGGTEVSAAXXXXXXXXXXXXXXTAHTYQLRGFFSRTNGIFGEK--------------RLLSLPFDCADTLLALQGILSATEREVVRKNGVLASAFRDFAGQPSNTLDAHSLGAVGARNLMGMGFITA---RVRMFGRPALSLGWTEKA 651
            LL  S +GN   G R+RR                        T   ++LRGFF R  GI  E                +LSLPFD AD LL LQGILSATE +V+R    LA   R   G+ +  + AHSLGA+GARNL   G +     R+ +  +P +S+GW   A
Sbjct:    2 LLATSFVGNLCVGGRLRR----------------------DATGEHFELRGFFCRLRGICDEAFWAPVLGPASTCIAAVLSLPFDVADLLLNLQGILSATELDVLRGGSQLARDLRAGGGEEAVHVYAHSLGALGARNLATAGALAGENVRLWLLAQPWISVGWLAAA 147          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.129.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGY1_ECTSI1.050e-17676.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZF00_9STRA1.630e-7948.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XTN3_9STRA6.500e-1536.90Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:559510..567579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.129.3mRNA_P-littoralis_Contig60.129.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig60 557533..567766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig60.129.3 ID=prot_P-littoralis_Contig60.129.3|Name=mRNA_P-littoralis_Contig60.129.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=699bp
MHNFFSLTTDVRYTVQHQTIADSMVWVICLASCLLAVTSSRLISSGVSCH
GSASISASARHRPVEALITQQRPHHHNCFLNAGRLVGSKFGSSSRHYQRM
TRGYGGRDGRTGVLQGSVRPRQRRTTRLDFFAPSSVRPHRHHPRRQLSIM
GRRAACGGGFVKPANPTTSSDRSTETDNAKARVGTVRTNCLPPPAKKRFS
WARPNRRSATTASSAAPAAAPESLNLAAKKKKDKSSTASSATTAASSSSL
LSLVMMVGSRRRAASTAAVATADKPRSKTKTQPLPTTGAAFRIKLGTTKG
FFTRQQRDRNDNTVDNHNNSTIIASPPSRFRAARGNPGPMRRASKASTPH
RAPFRPPGVGSFLNSAWRSFLRLEGCCEASWVGKGSAHVLAGALASSHSV
VAGVVVSLAVWASCARRLSGSEDDWKQVARITIEVAVLWYCHALPHGLGA
GRPLRGNFGTGKAGDLLGAMWHFLGQGAFIRFVAASGRLVNLNVLEANGL
LLGLSHLGNAVAGSRMRRVVGGTEVSAAAAVVAAVAAAAAAATAHTYQLR
GFFSRTNGIFGEKRLLSLPFDCADTLLALQGILSATEREVVRKNGVLASA
FRDFAGQPSNTLDAHSLGAVGARNLMGMGFITARVRMFGRPALSLGWTEK
ASNMCMVGDPICGSLLQKLLDPTCVILKGRGHLYDAYLACVGCLVVNQ*
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