prot_P-littoralis_Contig60.114.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig60.114.5
Unique Nameprot_P-littoralis_Contig60.114.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length320
Homology
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BLAST of mRNA_P-littoralis_Contig60.114.5 vs. uniprot
Match: A0A6H5KLH0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLH0_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 3.280e-82
Identity = 155/274 (56.57%), Postives = 176/274 (64.23%), Query Frame = 0 
Query:   47 SSIHDDIDECGFHNPLFSSTAGIKAPNDKSLFPSSGIPCAKDGAGSKDEDGNNT--SSSLVMRRHVRKNGRSDGTLVDTTVRHGRGDGPKKASSERQLRRVSSQHVPACVVVKQGDASDAEEILQHCAFHMEAYRVQVENQ-----APGSTTLLFVFHSGQPNQATLEITHTKPRNSAPADPEGILGRLPPSP-SNGTGRVTMTLGGKSVPHLPGEPYSCHIHQVGTVTFNPRKQARREXXXXXXXXXXXXXXKELGYLYILSQEGRTLFTSLS 312
            +   DD+   GFHNPLFS+     AP D+ LFP++           K E+ N    SSS+VMRRH++K+ R DGTLVD T R  R D  +K +SERQ+RRVSS  VPACV VK  DASDA EILQHCAFHMEA+RV  +NQ     AP  TT +FVFH GQPNQATLE+THT P  +      G  G   P P S G GRVTMTLGG +VPH PGEPYSC+I QVG VTFNPRKQAR                   GYLYILSQEGRTLFTSLS
Sbjct:   13 ADAQDDVAVSGFHNPLFSNAVS-GAPKDERLFPTT-----------KGEEANERRKSSSMVMRRHMKKDCRQDGTLVDKTKR--RVDRSQKITSERQMRRVSSLDVPACVAVKSEDASDAGEILQHCAFHMEAFRVHTKNQTVAAGAPTPTTFMFVFHGGQPNQATLEVTHTPPCLTPARGKAGDGGGEEPDPTSEGEGRVTMTLGGNNVPHRPGEPYSCYIRQVGHVTFNPRKQAR-------------------GYLYILSQEGRTLFTSLS 253
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig60.114.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLH0_9PHAE3.280e-8256.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig60contigP-littoralis_Contig60:519533..531896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig60.114.5mRNA_P-littoralis_Contig60.114.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig60 519533..531896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig60.114.5 ID=prot_P-littoralis_Contig60.114.5|Name=mRNA_P-littoralis_Contig60.114.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=320bp
LHRCLRTAEAPSHTLLSARLPHLSEVLRQGNDAGLQRVEYMSAMEGSSIH
DDIDECGFHNPLFSSTAGIKAPNDKSLFPSSGIPCAKDGAGSKDEDGNNT
SSSLVMRRHVRKNGRSDGTLVDTTVRHGRGDGPKKASSERQLRRVSSQHV
PACVVVKQGDASDAEEILQHCAFHMEAYRVQVENQAPGSTTLLFVFHSGQ
PNQATLEITHTKPRNSAPADPEGILGRLPPSPSNGTGRVTMTLGGKSVPH
LPGEPYSCHIHQVGTVTFNPRKQARRERERERERERERERNKELGYLYIL
SQEGRTLFTSLSGRMAREF*
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