prot_P-littoralis_Contig6.57.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig6.57.1
Unique Name	prot_P-littoralis_Contig6.57.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	682

Homology

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BLAST of mRNA_P-littoralis_Contig6.57.1 vs. uniprot
Match: A0A6H5KPG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG0_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 4.850e-6
Identity = 120/312 (38.46%), Postives = 147/312 (47.12%), Query Frame = 0

Query:  403 AVELAQKEQAWIRERAQLLTVIKLQHKRLM-QSSKTSGSSFSSSSPFSSRNNSAFMFKHNSGIATATATTARTEPASP-----RSGSY--GATPPPLPPRALS----PQRQLTSPQPXXXXXXXXXXXXTGGRHENDEAFTFST-----------------------SERTHLLCKVELQREEAAR--VGRRGADGGARXXXXXXXXXXXTRDGAGDTEIAFGVDVAAGAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGLSCTSSGCCADGRLEVVEKNIAVVLRRLNDLEERGSK 677
            AV+L QKEQAW RERAQLLTVIKLQH++LM + S +S  S++  SP              SG +  TA+              RS  Y    TPPPL  R       P + LT P P                ++ DE  + ST                       SERTHLL +VELQRE+AA   VGR  A G  R           +  G+   +        + AV                  XXXXXXXXXXXXXXXXXXXXXX  E +S  S  CC +GRLEV+E+N+  VLRRL++LE+R SK
Sbjct:  288 AVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADGSP--------------SGDSVGTASXXXXXXXXXXXXXXRSSPYVSSVTPPPLQSRQRHRPSRPSQSLTPP-PATREAPIITSRPPRLANDYDEEDSDSTPRAGARPAGXXXXXTAAPVLLSRSERTHLLGRVELQREKAAARGVGRLQA-GRGRGLASAGSVKSRSDSGSSCPD--------SPAVAGPMAAPRGFPAESEDRRXXXXXXXXXXXXXXXXXXXXXXNAETVS-PSRRCCVEGRLEVMERNVKAVLRRLDELEKRKSK 574

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig6.57.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig6.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KPG0_9PHAE	4.850e-6	38.46	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 654..674
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..581
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 483..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 606..642
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 622..642
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 466..481

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig6	contig	P-littoralis_Contig6:200830..225087 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig6.57.1	mRNA_P-littoralis_Contig6.57.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig6 200759..225448 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig6.57.1 ID=prot_P-littoralis_Contig6.57.1|Name=mRNA_P-littoralis_Contig6.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=682bp
MSAELYQRQINWREFISRRQSEQQGLAILDDACGRGAPDRHKNLIKAGGH
HHLGAHTQLMSGSSNNTATSLPKDRAQPYLPTASGGTREQHRQRRRQQQL
HQEPSHQPAQAPSYSSMLAARRTAMGSEVRRNMHLGSCSPTRGRALKISS
LRSTSQTSPDSPPLPPPPLGIVVHFRVRARARAASTTRGRRLSRQAAGNT
GTPRMKAAPARSAQPKLSRKAAEAAAATTTTTRPPPPPETTAITTEAEAA
QRVSAAQEASAAASVVAAGGGSGGCSKKKKIYGEAASASCIAARTTTARA
GLKRSVSRRSAHINKEGQQRTGESMRSAERMAAGRVRERGCHSSSTVTTA
CKAGAATSGGTGAGYTRGDDWGAGGGRRVAVAALLPPAESTGAFAEKSSA
VQAVELAQKEQAWIRERAQLLTVIKLQHKRLMQSSKTSGSSFSSSSPFSS
RNNSAFMFKHNSGIATATATTARTEPASPRSGSYGATPPPLPPRALSPQR
QLTSPQPPPPLLPPSPPPATGGRHENDEAFTFSTSERTHLLCKVELQREE
AARVGRRGADGGARGGGRRRRRRRRTRDGAGDTEIAFGVDVAAGAVTTSA
SAAATMPPRHFSAARGKADGGGSGGTSSSSSGSSSNNGEGLSCTSSGCCA
DGRLEVVEKNIAVVLRRLNDLEERGSKKKGQ*