prot_P-littoralis_Contig6.159.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.159.1
Unique Nameprot_P-littoralis_Contig6.159.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length971
Homology
BLAST of mRNA_P-littoralis_Contig6.159.1 vs. uniprot
Match: D7FIQ7_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIQ7_ECTSI)

HSP 1 Score: 953 bits (2464), Expect = 0.000e+0
Identity = 634/1014 (62.52%), Postives = 711/1014 (70.12%), Query Frame = 0
Query:    1 MTFAGSFVHGSG----------EEQDIEEFLSQIDDMTSAAAGGSGEVN-LRGGSTS--GGADLFLGSSSPPTQQQVMVGDTDELVFRPDEGRAIADAFPSDWLSDLELLGL------ETSHSSATPPEQPTPAXXXXXXDSTQQQEEK------QHRVVAEYGTENEEILGTEPEILDE-ETAYDSGAAAAGMLMSAGGRMASWATGTPASFVGAAAAALRGDTRGTASGSTVDXXXXXXXXXXXXXXXXXXXXXXXXAGEPPLDWPVTLDMLGMAEAEAQPERTTATAAAPVSDLPNMPPPAGREDPFPDFVEISDPLSVSQFPKPGNAL-SGGSSSGGGDEHAGEGERDSSR-TGAMGQEREQGQRQVLRAPLRTVEVYLRPDVTWESVSDAYMAVMLSRGLVVRQQTEKTVIAEKSADAPGDWATVKLTVGVTRDKLRTLVMQFYADSR--APMLSFAGTIARFSGRAGDGLYMAIRDALVERRIPLSFLATDAEDVSLDPRYVRDLVGMYAHENVVNLTRYALPLEEFVRKEEEQSARLEATLLPQFNANGLEPPRPTRSKPLSAYPLTTRRPPVSSCGLKEAREIMERAREHIDTATTTTTSSPLGKIGVDREDENETVGGDVSVFANGEDEEGGDDGGRSERKGGGVGVGSGSELVADGIRSLIRATWEHVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVVALRDGAGGSAACSTPVGREFAARFRPMAEEAVLCHCKAVHTKRVGQLYLTYNHLCFHSSVLGFTSQRVLPLFTVASISHAPSILGMDVVTLVDRGGEAHSFGITAMEAGFPQRFHNLVKQCLVLSKADASRRAAERGGAAPHDKEPDEEQILARVQRVAKAKQLREARGAASFAYAS--------------TPTAATAIAAAGAASLSPRAADALTGKEATSSGLAGNGGGVVEGRAGGAIGMGXXXXXXXXXXXXXXXXGQEAXXXGAGRXXXXXXXXXXPGSMMAMGIQAFLEESQKRS 970
            M  AGSFVHG+G          EEQDI +F+S IDD    A+GGS   + LRGG +S   G D+FLGS SPP  QQV  G +       D+G+AIADAFP+DWL+D E +GL      ++S +SAT   QP  +     X               QHR       E  E+LG EP+ILD  +  Y SGAAAAGMLMSAGGRM SWA  TPAS V AA  A RGD     S +                           A E PLDW  TLDM+GMAEAE   + T+A A APVS+LP++PPPA RE  FPDFVEI DP +VSQFPKP NAL +  ++ GGGD  AG+G  +S     A GQER  GQR VL APLRTVEVYLRPDVTWESVSD YM VMLSRGLVVR QTEK V AEKSADAPGDWATVKLTVGVTRDKLRTLV+QFYAD+R  AP+LS AGTIARFSGR GD LY AIR+ LVER++PLSFLATDAE+VSLDP YVRDLVGMYAHENVVNLTRYALPLEEFVR+EEE+ ARLEATLLPQ+ A GL PPRPTRSKPLSAYPLTTRRPPVS+CG++EARE+MERAREH+        S P  K GVD +DEN        VFA+G            E +G  VG GS    VA+GIRSLIRATWE VK+WCDEEAEARVRRKDAQVRDRLLAVE HREAL+ ALRDGAGGSAA STP GREFAARFRPMA+EAVLC CKAVH KRVGQLYLT NH+CFHSSVLGFTSQRVLPL TVA+ISHA S+LGMD++TLVDRGG+ HSFGITA+EAGFP+RFH+L+KQCLVL KADASRRAA+R GAA  ++EPDEEQILARVQR+AKAKQLR                           P AA+  +  G     PR  ++   +  T + +   GGGVVEG AGGA+      XXXXXXXXXXXXX    XXX    XXXXXXXXX  GSMMAMGIQAFLEESQKRS
Sbjct:    1 MASAGSFVHGTGASEERVRQSKEEQDIADFMSSIDDT---ASGGSTTTSVLRGGRSSVGKGGDIFLGSLSPPALQQV-TGTSAAGELLADDGKAIADAFPADWLNDFEGIGLGVQGKTDSSAASATATAQPIHSSPQGQXXXXXXXXXXXXXXXXQHRDATIQNNETGEVLGEEPQILDNVDEGYGSGAAAAGMLMSAGGRMVSWAANTPASLVDAATGAFRGDAHHAVSRNA-----------GGDLGNGSAAAASTDADELPLDWQGTLDMVGMAEAETDTKGTSALAVAPVSELPSLPPPAAREGGFPDFVEIRDPRNVSQFPKPDNALVAKAAAGGGGDGQAGQGAXESGEHAAAAGQER--GQRHVLPAPLRTVEVYLRPDVTWESVSDVYMGVMLSRGLVVRHQTEKMVTAEKSADAPGDWATVKLTVGVTRDKLRTLVIQFYADTRKQAPILSLAGTIARFSGRTGDDLYTAIRNVLVERQMPLSFLATDAEEVSLDPHYVRDLVGMYAHENVVNLTRYALPLEEFVRQEEERLARLEATLLPQYRACGLAPPRPTRSKPLSAYPLTTRRPPVSACGVEEAREVMERAREHVRGGGD---SFPPQK-GVDVDDEN--------VFASGGXXXXXXXXXXDEGRGAKVGSGS---SVAEGIRSLIRATWEDVKEWCDEEAEARVRRKDAQVRDRLLAVEGHREALIAALRDGAGGSAASSTPAGREFAARFRPMAKEAVLCQCKAVHAKRVGQLYLTCNHVCFHSSVLGFTSQRVLPLLTVATISHASSVLGMDLLTLVDRGGQEHSFGITAVEAGFPERFHDLLKQCLVLCKADASRRAAQREGAAASEREPDEEQILARVQRLAKAKQLRXXXXXXXXXXXXXXXXXXXXXXXXDMAPPAASPHSRPG----YPRPEESEFAERDTGASV---GGGVVEGGAGGAM------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGSMMAMGIQAFLEESQKRS 969          
BLAST of mRNA_P-littoralis_Contig6.159.1 vs. uniprot
Match: A0A7S2F8A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F8A2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.230e-8
Identity = 47/131 (35.88%), Postives = 70/131 (53.44%), Query Frame = 0
Query:  640 LIRATWEHVKDWCDEEAEARVRRKDAQVRDRLLAVERHREALVVALRDGAGGSAACSTPVGREFAARFRPMAEEAVLCHCKAVHTK-----RVGQLYLTYNHLCFHS--SVLGFTSQRVLPLFTVASISHA 763
            ++RA W  +   C+EEA AR+ RK   V  RL A+E +R A+V  L + +  +      V R F  RFR +A+EA+L  C AV T+     R G++Y+T  HL F     +L   +Q  +P +T+  I  A
Sbjct:   69 VVRALWRLLGSKCEEEARARMARKQKVVTQRLQAIEGYRSAVVSKLANRSQQNRTELIGVERAFRGRFR-VADEALLVDCAAVVTEADGKQRKGRVYVTMGHLWFDDPGGLLTSPTQTPIPFYTIHEIGKA 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIQ7_ECTSI0.000e+062.52GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2F8A2_9STRA6.230e-835.88Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 555..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 910..970
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..628
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..331
NoneNo IPR availablePANTHERPTHR23202:SF64PROLINE-RICH PROTEIN, PUTATIVE-RELATEDcoord: 92..953
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 92..953
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 699..790
e-value: 9.0E-7
score: 30.7
IPR004182GRAM domainPFAMPF02893GRAMcoord: 715..762
e-value: 2.9E-5
score: 23.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:655634..660730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.159.1mRNA_P-littoralis_Contig6.159.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 655383..661501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.159.1 ID=prot_P-littoralis_Contig6.159.1|Name=mRNA_P-littoralis_Contig6.159.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=971bp
MTFAGSFVHGSGEEQDIEEFLSQIDDMTSAAAGGSGEVNLRGGSTSGGAD
LFLGSSSPPTQQQVMVGDTDELVFRPDEGRAIADAFPSDWLSDLELLGLE
TSHSSATPPEQPTPAPALALADSTQQQEEKQHRVVAEYGTENEEILGTEP
EILDEETAYDSGAAAAGMLMSAGGRMASWATGTPASFVGAAAAALRGDTR
GTASGSTVDDGGGGGSGSGSAEPSSATTTTPPAAGEPPLDWPVTLDMLGM
AEAEAQPERTTATAAAPVSDLPNMPPPAGREDPFPDFVEISDPLSVSQFP
KPGNALSGGSSSGGGDEHAGEGERDSSRTGAMGQEREQGQRQVLRAPLRT
VEVYLRPDVTWESVSDAYMAVMLSRGLVVRQQTEKTVIAEKSADAPGDWA
TVKLTVGVTRDKLRTLVMQFYADSRAPMLSFAGTIARFSGRAGDGLYMAI
RDALVERRIPLSFLATDAEDVSLDPRYVRDLVGMYAHENVVNLTRYALPL
EEFVRKEEEQSARLEATLLPQFNANGLEPPRPTRSKPLSAYPLTTRRPPV
SSCGLKEAREIMERAREHIDTATTTTTSSPLGKIGVDREDENETVGGDVS
VFANGEDEEGGDDGGRSERKGGGVGVGSGSELVADGIRSLIRATWEHVKD
WCDEEAEARVRRKDAQVRDRLLAVERHREALVVALRDGAGGSAACSTPVG
REFAARFRPMAEEAVLCHCKAVHTKRVGQLYLTYNHLCFHSSVLGFTSQR
VLPLFTVASISHAPSILGMDVVTLVDRGGEAHSFGITAMEAGFPQRFHNL
VKQCLVLSKADASRRAAERGGAAPHDKEPDEEQILARVQRVAKAKQLREA
RGAASFAYASTPTAATAIAAAGAASLSPRAADALTGKEATSSGLAGNGGG
VVEGRAGGAIGMGGGGGKSVGGDDERSGGGQEAGGGGAGRGGAGRGGGGR
PGSMMAMGIQAFLEESQKRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR004182GRAM