prot_P-littoralis_Contig6.133.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig6.133.1
Unique Nameprot_P-littoralis_Contig6.133.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length317
Homology
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BLAST of mRNA_P-littoralis_Contig6.133.1 vs. uniprot
Match: A0A6H5L4H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H4_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 7.360e-91
Identity = 177/299 (59.20%), Postives = 213/299 (71.24%), Query Frame = 0 
Query:    1 IRTFKITGPKLLVPTCRRDIVEKLGLFITDGECSCLLWESIAGRLQRWSVPPRLARVLRKCLADLPGDRVSTMAEVCKLLRGIAAGDAHDEGETAAVSTAKDDG--EKAASERLRTGMVLSEIGVCLCSRGQIEEAERYYKMALLSSDNVVEAFYNLGLLYIKPAFSKFQEAQQVFDAATERMSDRNPYRKASIEHSRAAKRKSNYYQSQEMMRALSGKYGSDSSKGSRDRGSMGAGGXXXXXXXARTIGEPARENHIKRDGSPGISHRQSFPPDQQKV-SSSFKSRGSPSRASASDAT 296
            IR FKI GP +LVPTCRRDIVEKLGLFITDGE SC LW SIAG LQRWS+P  LA+VLR+CLAD P DR S+M EVC+LLRGIAAGD   + E +AVS A D       AS+RLRTGM+L++IGVCLCS+G+ EE+ERYYK+ALLSS+ V EA            F+KF+EAQQ+FDAATERMS  +P RK SIEHS+AA+RKSNY+QSQE+M+ALSG Y   SS  SRDRG      XXXXXXX          + +  + + G + + SF P+Q+   S+S KS G   R+SAS AT
Sbjct:   73 IRAFKIDGPHMLVPTCRRDIVEKLGLFITDGELSCKLWHSIAGGLQRWSMPFSLAQVLRRCLADSPKDRFSSMEEVCRLLRGIAAGDGGRDDEDSAVSAASDYSCDPDVASDRLRTGMILNDIGVCLCSKGETEESERYYKLALLSSEGVFEAXXXXXXXXXXXXFNKFREAQQMFDAATERMSHGDPRRKFSIEHSKAAERKSNYHQSQEIMKALSGSYNCVSSNSSRDRGXX----XXXXXXXXXXXXXXXXXSGVMSESADGDNRQASFLPEQKHAGSTSVKSLG---RSSASSAT 364
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BLAST of mRNA_P-littoralis_Contig6.133.1 vs. uniprot
Match: D8LN11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN11_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 2.440e-63
Identity = 116/168 (69.05%), Postives = 137/168 (81.55%), Query Frame = 0 
Query:    1 IRTFKITGPKLLVPTCRRDIVEKLGLFITDGECSCLLWESIAGRLQRWSVPPRLARVLRKCLADLPGDRVSTMAEVCKLLRGIAAGDAHDEGETAAVSTAKDDG--EKAASERLRTGMVLSEIGVCLCSRGQIEEAERYYKMALLSSDNVVEAFYNLGLLYIKPAFSK 166
            IR FKI GP +LVPTCRRDIVEKLGLFITDGE SC LW+SIAG LQRWS+P  LA+VLR+CLAD P DR S+M EVC+LLRGIAAGD   + E +AVS A D    E  AS+R+RTGM+L++IGVCL S+G+ EE+ERYYKMALLSS++V EA+YNLGLLY   AF+K
Sbjct: 1675 IRAFKIDGPHMLVPTCRRDIVEKLGLFITDGELSCKLWDSIAGGLQRWSMPFSLAQVLRRCLADSPKDRYSSMEEVCRLLRGIAAGDGGRDDEASAVSAASDYSCDENVASDRVRTGMILNDIGVCLSSKGETEESERYYKMALLSSEDVFEAYYNLGLLYSTAAFNK 1842
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig6.133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4H4_9PHAE7.360e-9159.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN11_ECTSI2.440e-6369.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 84..224
e-value: 5.3E-10
score: 40.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 106..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig6contigP-littoralis_Contig6:497517..500076 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig6.133.1mRNA_P-littoralis_Contig6.133.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig6 497517..500076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig6.133.1 ID=prot_P-littoralis_Contig6.133.1|Name=mRNA_P-littoralis_Contig6.133.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=317bp
IRTFKITGPKLLVPTCRRDIVEKLGLFITDGECSCLLWESIAGRLQRWSV
PPRLARVLRKCLADLPGDRVSTMAEVCKLLRGIAAGDAHDEGETAAVSTA
KDDGEKAASERLRTGMVLSEIGVCLCSRGQIEEAERYYKMALLSSDNVVE
AFYNLGLLYIKPAFSKFQEAQQVFDAATERMSDRNPYRKASIEHSRAAKR
KSNYYQSQEMMRALSGKYGSDSSKGSRDRGSMGAGGGAGGGAGARTIGEP
ARENHIKRDGSPGISHRQSFPPDQQKVSSSFKSRGSPSRASASDATHRSG
MDVAEVSRSLQSMSRER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf