prot_P-littoralis_Contig596.12.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig596.12.2
Unique Nameprot_P-littoralis_Contig596.12.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length419
Homology
BLAST of mRNA_P-littoralis_Contig596.12.2 vs. uniprot
Match: A0A6H5L7U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7U9_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.020e-26
Identity = 95/219 (43.38%), Postives = 116/219 (52.97%), Query Frame = 0
Query:  219 EFRGLLAKGGGDSGRKGPRNAAAEAAVAPAYGGGYVRVMCSRRKAAVGAGRAKRRGSLGRGAGT---------GVRRDAXXXXXXXXXXXXXXXGRKA--------GLSQNNERPPLKVSRSLFIEIENKASEPPRKAPPARGRAFSKRQHNGVVVH--------GRTSASGENADDEQGDSDDEAVCGCAKKCLRLADAWYHTLIGSTAKVKFSEVDQ 412
            E RGLL  GG        R  +A A +    GG        RRKAA+GAGRAKRR SLG   G          G R  A                 K         G    + R P+KVSRSLFIEIENKASEPPR+  PA G    +R+H   ++         GR  A+GE+ADD+   SDDEA+CGCA++CLR+ D+WYH L G+TA+VKFSE+DQ
Sbjct:  143 ESRGLLVDGGVS------RTVSAAAPIGGGIGG-------RRRKAAMGAGRAKRRPSLGADGGCCEASGRFGGGGRSTAHCRQQGAGRTAAGRESGKEVGGLVGSPGGGSGSSRRPVKVSRSLFIEIENKASEPPRR--PAAG--SRRRRHRASLLGNLPRARLLGRDDAAGEDADDQGECSDDEAMCGCAERCLRVVDSWYHKLKGTTAEVKFSELDQ 344          
BLAST of mRNA_P-littoralis_Contig596.12.2 vs. uniprot
Match: D7FYD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD5_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 3.770e-25
Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 0
Query:  315 RPPLKVSRSLFIEIENKASEPPRKAPPARGRAFSKRQHNGVVVH--------GRTSASGENADDEQGDSDDEAVCGCAKKCLRLADAWYHTLIGSTAKVKFSEVDQ 412
            R P+KVSRSLFIEIENKASEPPR+  PA G    +R+H   ++         GR  A+GE+ADDE   SDDEA+CGCA++CLR+ D+WYH L G+TAKVKFSE+DQ
Sbjct:  163 RRPVKVSRSLFIEIENKASEPPRR--PAAG--SRRRRHRASLLGNLPRARFLGRVDAAGEDADDEGERSDDEAMCGCAERCLRVVDSWYHKLTGTTAKVKFSELDQ 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig596.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7U9_9PHAE1.020e-2643.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD5_ECTSI3.770e-2559.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 276..353
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig596contigP-littoralis_Contig596:56349..58873 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig596.12.2mRNA_P-littoralis_Contig596.12.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig596 54579..66473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig596.12.2 ID=prot_P-littoralis_Contig596.12.2|Name=mRNA_P-littoralis_Contig596.12.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=419bp
MVCRIGSGAAQQQQQQQQPCCSSTTASTAMKRTSSASCSTSSSSSYACTV
TPPMTLPSRGWGDGGSEGSGGSRRSSGFSCHSYSSVGNSGSSSSSSCGCG
CGVHGSSGHGSWTSGGSVYGSGSACSERGGAGGGGKGGGQQQQQQLKWFD
LPDGFSSAEEETWGSEGEIEETALAGRRHALVTGGPSRHLGANTNTKHNG
GMPSINDEKEEGQAGECGEFRGLLAKGGGDSGRKGPRNAAAEAAVAPAYG
GGYVRVMCSRRKAAVGAGRAKRRGSLGRGAGTGVRRDAAAAAAAGSSSSS
SSSGRKAGLSQNNERPPLKVSRSLFIEIENKASEPPRKAPPARGRAFSKR
QHNGVVVHGRTSASGENADDEQGDSDDEAVCGCAKKCLRLADAWYHTLIG
STAKVKFSEVDQGLPSMV*
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