prot_P-littoralis_Contig21.187.4 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: A0A6H5L4T7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T7_9PHAE) HSP 1 Score: 541 bits (1393), Expect = 2.940e-191 Identity = 285/372 (76.61%), Postives = 315/372 (84.68%), Query Frame = 0
Query: 1 MDRYLGATMFCKECVAESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVIEGGRDQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKKLGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLLVCSCWNPAACGSKGNXXXXXXXXXXXXXXXXXXXAEEDDGSRKQAQE-DSLDVGPLAVSAAAGASTNALKRPFRAMYEQRGRLFTVEFLERRAAQGVTLETLKPALV 371
MDRY+G+TMFCKECVAESDI+VDPRAGEIICRTCAVVIGERCIDDGAEW+T+A+DS+NGR DPNRCG AAASPLLSAKSGMNT+IEGG+D KLTA+LQ+LQG+AV+ES SERALK+DFF KVREFG+RLGLTHAMQE ACLLLRKAEDSGLFK KKAERG AICVAVTLLTCRQWRR QTMKEM+T+FNV +KALNKAVKKL NLEIE+ PSLRGEHHIP LCDKLGLP FVSVAA+HAAQQAS+WDLV GMKPSAVAAAAVLLVCSCWNPAACG A + ++ A E ++ DV P AVS A G + A+KRPFRAMYEQRGRLFTVEFLERRAA+ VTLETLKP L+
Sbjct: 1 MDRYMGSTMFCKECVAESDIYVDPRAGEIICRTCAVVIGERCIDDGAEWQTYAEDSNNGRADPNRCG--AAASPLLSAKSGMNTLIEGGQDSKLTAKLQKLQGMAVKESASERALKMDFFGKVREFGNRLGLTHAMQEHACLLLRKAEDSGLFKVKKAERGVAICVAVTLLTCRQWRRGQTMKEMSTMFNVSLKALNKAVKKLSNLEIERAPSLRGEHHIPLLCDKLGLPPFVSVAARHAAQQASRWDLVDGMKPSAVAAAAVLLVCSCWNPAACGD-------------GVVDRRSKKARKTQQQQQAAVEGETWDVRPAAVSEAGGTTVMAMKRPFRAMYEQRGRLFTVEFLERRAAKEVTLETLKPILM 357
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: T1KYS9_TETUR (Transcription initiation factor IIB n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KYS9_TETUR) HSP 1 Score: 110 bits (274), Expect = 5.940e-24 Identity = 85/271 (31.37%), Postives = 142/271 (52.40%), Query Frame = 0
Query: 4 YLGATMFCKECVAESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVI------EGGRDQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKK-LGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLLVC 267
Y A + C+E ++ + D RAG++IC C +V+G+R ID G+EWRTF+++ +N DP+R G AA +PL+ + ++T+I G K +++ Q S SER+L ++ F ++ + ++ L + E A LL ++ DS + K +AI A ++CRQ +T KE+ + V K + + K L LE G+ + + C LGL + + AA H A++A + D+V G P +VAAAA+ + C
Sbjct: 3 YRKAKIGCRE-HPDATLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKANA--DPSRVG--AAENPLME-NNDLSTIIARAEPNSSGEGFKYSSKKQM--------SSSERSL-LNGFKEISDMADKINLAKTIVERANLLFKQVHDS---RTTKGRSNDAIASACLYISCRQEGVPRTFKEICAVSKVSKKEIGRCFKLILKALETNVDTITTGDFMV-RFCSNLGLSSAIQKAATHIARKAVELDIVPGRSPISVAAAAIYMAC 254
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: A0A6P7VZH4_IXOSC (Transcription initiation factor IIB n=24 Tax=Ixodoidea TaxID=297308 RepID=A0A6P7VZH4_IXOSC) HSP 1 Score: 109 bits (272), Expect = 1.440e-23 Identity = 88/266 (33.08%), Postives = 139/266 (52.26%), Query Frame = 0
Query: 6 GATMFCKECVAESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVIEGGR-----DQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKK-LGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLL 265
A +FC + ++ + D RAG++IC C +V+G+R +D G EWR F ++ SN +DP R G A+ +PLL+ S + T+I G D+ TA+ Q + + S S+RAL V+ F ++ R+ LT + + + LL ++ D K K +AI A + CRQ +T KE+ + V K + + K L LE G+ + + C LGLP+ V AA H A++A + D+V G P +VAAAA+ +
Sbjct: 9 NARVFCPD-HPDAALVEDYRAGDMICPQCGLVVGDRIVDVGTEWRVFPNEKSN--NDPARVG--ASENPLLNG-SDLATMIGKGTGDASFDESGTAKYQNRKTM----SSSDRAL-VNAFREISNMADRINLTKTIVDRSNLLFKQVHDG---KTLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSKVSKKEIGRCFKLILKALETSVDLITTGDF-MSRFCSNLGLPSSVQKAATHIARKAVELDVVSGRSPISVAAAAIYM 259
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: TF2B_DICDI (Transcription initiation factor IIB n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=TF2B_DICDI) HSP 1 Score: 108 bits (269), Expect = 4.500e-23 Identity = 76/261 (29.12%), Postives = 124/261 (47.51%), Query Frame = 0
Query: 9 MFCKEC-VAESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVIEGGRDQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKKLGNL--EIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLLV 266
++C C + + DI D G++ICR C VV+G+R +D+ +EWRTF++ S G D PNR G +PLL + TV +G +D RLQ + + A K ++ + L +Q+ A L R +D K K + + A + CRQ ++T KE+A + NVP K +++ K + + ++ E + C L LP V A+H ++ A +V G P +V AA++ +V
Sbjct: 21 LWCMVCRIQDPDIIEDYAKGDLICRGCGVVVGDRIVDEHSEWRTFSNSESTGAD-PNRVG--GPINPLLRDSALSTTVGKGSKDSGTLTRLQNKSALGTGDRNLLAAFK-----EIGRMADHMNLPQTVQDRANELFRFMDDK---KSTKGRSVDGMVAAALYIACRQEHLSRTFKEIAALTNVPKKEISRCYKIMKETFASVLNLQTISSEDFTSRFCSTLKLPNDVKKGAEHVSKMAMDMGIVAGKSPISVTAASIYMV 270
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: F0ZB51_DICPU (Uncharacterized protein gtf2b n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZB51_DICPU) HSP 1 Score: 108 bits (270), Expect = 5.090e-23 Identity = 77/261 (29.50%), Postives = 125/261 (47.89%), Query Frame = 0
Query: 9 MFCKEC-VAESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVIEGGRDQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKKLGNL--EIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLLV 266
++CK C V + DI D G++ICR C VV+G+R +D+ +EWRTF++ S G D PNR G +PLL + T+ +G RD RLQ + + A K ++ + L +Q+ A L R +D K K + + A + CRQ ++T KE+A + NVP K +++ K + + ++ E + C L LP V ++H ++ A +V G P +V AA++ +V
Sbjct: 46 LWCKICRVNDPDIIEDYAKGDLICRECGVVVGDRIVDEHSEWRTFSNSESTGAD-PNRVG--GPINPLLRDSALSTTIGKGSRDSSSLNRLQNKSALGTGDRNLLAAFK-----EIGRMADHMNLPQTVQDRANELFRFMDDK---KSTKGRSVDGMVAAALYIACRQEHLSRTFKEIAALTNVPKKEISRCYKIMKETFSSVLNLQTISTEDFTSRFCSTLKLPIEVKKISEHVSKTAMDMGIVAGKSPISVTAASIYMV 295
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: A0A1D1UXA2_RAMVA (Transcription initiation factor IIB n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UXA2_RAMVA) HSP 1 Score: 107 bits (267), Expect = 7.210e-23 Identity = 85/263 (32.32%), Postives = 134/263 (50.95%), Query Frame = 0
Query: 17 ESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCG-------ECAAASPLLSAKSGMNTVIEGGRDQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERG---EAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKK-LGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLLVCS 268
E+ + D RAG+++C C +V+G+R ID G EWRTF+++S G DDP+R G E A S ++ A SG G D + + + + I S +RAL F ++ R+ + ++ + A +L ++ ++ KA RG EAI A + CR+ +T KE+ I V K + + K L N++ G++ + + C LGLP V AA H A++A+ DL GG P+ VAAAA+ L C+
Sbjct: 18 EAILVEDYRAGDLVCPMCGLVVGDRVIDVGTEWRTFSNES--GGDDPSRVGGPENPLFEGAELSTMIGAASG-----PAGLDSQGFNKYRNRKTI----SPQDRALTTGF-REITTMAERINMARSIVDQAHMLFKQVYET------KAMRGRATEAIASACLYIACRKEGVPRTFKEICAISRVTKKEIGRCFKLILRNVDTSVDLITTGDY-MSRFCSNLGLPQTVQRAATHIARKATDMDLAGGRAPTTVAAAAIFLACA 261
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: A0A8B6EZI2_MYTGA (Transcription initiation factor IIB n=3 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6EZI2_MYTGA) HSP 1 Score: 107 bits (267), Expect = 7.600e-23 Identity = 82/259 (31.66%), Postives = 128/259 (49.42%), Query Frame = 0
Query: 18 SDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVI----------EGGRDQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKK-LGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLL 265
+++ D AG++IC C +V+G+R +D G EWRTF+++ S G DP+R G AA +PLL ++T+I E G+ R S ++RAL ++ F ++ G RL L + + A L ++ D K K +AI A + CRQ +T KE+ + + K + + K L NLE G+ + + C LGLP V AA H A++A + DLV G P +VAA+A+ +
Sbjct: 21 ANLVEDYHAGDMICPECGLVVGDRVVDVGTEWRTFSNEKSTGNKDPSRVG--AAENPLLDG-GDLSTMIQVDPTSMSYDEHGKPMYKNRRTM---------SSADRAL-INAFREIGNMGDRLNLPKMIADRANNLFKQVNDG---KALKGRSNDAIAAACMYIACRQEGVPRTFKEICAVSKISKKEIGRVFKLILKNLETNVELITTGDF-MSRFCSNLGLPTSVQKAATHIARKAVEMDLVAGRSPISVAASAIYM 262
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: UPI0006B0CFC9 (transcription initiation factor IIB-like n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0CFC9) HSP 1 Score: 104 bits (260), Expect = 6.720e-22 Identity = 87/265 (32.83%), Postives = 135/265 (50.94%), Query Frame = 0
Query: 7 ATMFCKECVAESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVIEGGR-----DQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKK-LGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLL 265
A +FC ++ + D RAG++IC C +VIG+R +D G EWRTF ++ S +DP R G AA +PLL+ S ++TV+ G D+ A+ Q + + S S+RAL + F ++ R+ LT + + A L ++ D K K +AI + + CRQ +T KE+ + V K + + K L LE G+ + + C LGLP V AA H A++A + D+V G P +VAAAA+ +
Sbjct: 9 AKIFCPA-HPDAPLIEDYRAGDMICPECGLVIGDRVVDVGTEWRTFNNEKST--NDPTRVG--AAENPLLNG-SDLSTVVGRGTGDASFDESGVAKYQNRRTM----SSSDRAL-TNAFREINNMADRINLTKTIVDRANSLFKQVHDG---KTLKGRSNDAIASSCLYIACRQEGVPRTFKEICAVSKVSKKEIGRCFKLILKALETSVDLITTGDF-MSRFCSNLGLPNTVQRAATHIARKAVELDIVPGRSPISVAAAAIYM 258
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: UPI000C6DCA9B (transcription initiation factor IIB-like isoform X1 n=2 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DCA9B) HSP 1 Score: 104 bits (260), Expect = 7.180e-22 Identity = 85/249 (34.14%), Postives = 130/249 (52.21%), Query Frame = 0
Query: 23 DPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPLLSAKSGMNTVI-----EGGRDQKLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKK-LGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLL 265
D RAG++IC C +V+G+R ID G+EWRTF+D+ ++ DP R G AA +PLL+ S ++TVI E D+ + Q + + S S+RAL ++ F ++ R+ L + + A L ++ D K K +AI A + CRQ +T KE+ + V K + + K L LE G+ + + C LGLPA V AA H A++A + D+V G P +VAAAA+ +
Sbjct: 28 DYRAGDMICPHCGLVVGDRVIDVGSEWRTFSDEKADS--DPCRVG--AAENPLLNG-SDLSTVIGRGSGEASFDESGLPKYQNRRTM----SSSDRAL-INAFREINNMADRINLPKTIVDRANNLFKQVHDG---KTLKGRSNDAIASACLYIACRQEGVPRTFKEICAVSKVSKKEIGRCFKLILKALETSVDLITTGDF-MSRFCSNLGLPASVQKAATHIARKAVEADIVPGRSPISVAAAAIYM 262
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Match: A0A0B6ZVU2_9EUPU (Transcription initiation factor IIB (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZVU2_9EUPU) HSP 1 Score: 104 bits (259), Expect = 9.900e-22 Identity = 87/271 (32.10%), Postives = 133/271 (49.08%), Query Frame = 0
Query: 3 RYLGATMFCKECVAESDIFVDPRAGEIICRTCAVVIGERCIDDGAEWRTFADDSSNGRDDPNRCGECAAASPL-----LSAKSGMNTVIEGGRDQ--KLTARLQRLQGIAVRESKSERALKVDFFAKVREFGHRLGLTHAMQEDACLLLRKAEDSGLFKFKKAERGEAICVAVTLLTCRQWRRAQTMKEMATIFNVPMKALNKAVKK-LGNLEIEKGPSLRGEHHIPQLCDKLGLPAFVSVAAKHAAQQASKWDLVGGMKPSAVAAAAVLL 265
R+L A +FC+E ++++ D AG++IC C +V+G+R ID G+EWRTF SN +D + AA +PL +S M T + RD+ K + +R Q S S+RAL + + + RL L + + A L ++ DS K K +AI A + CRQ +T KE+ + + K + + K L NLE G+ + + C LGL + AA H A++A DLV G P +VAAAA+ +
Sbjct: 7 RHLAAQVFCRE-HPDAELVEDYHAGDMICPVCGLVVGDRVIDVGSEWRTF----SNEKDSKDNSRVGAAENPLFEGGDMSTMIAMGTGNDSLRDEFGKPMYKNRRTQ-----MSSSDRALHTAY-RDIGQMADRLNLPKMLVDRASTLFKQVHDS---KLLKGRSNDAISSACMYIACRQDGVPRTFKEICAVSKISKKEIGRVFKLILKNLETNVNLITTGDF-MSRFCSNLGLSPTIQKAATHIARKAVDMDLVPGRSPISVAAAAIYM 262 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig21.187.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig21.187.4 ID=prot_P-littoralis_Contig21.187.4|Name=mRNA_P-littoralis_Contig21.187.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=372bpback to top |