prot_P-littoralis_Contig205.11.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig205.11.1
Unique Nameprot_P-littoralis_Contig205.11.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length209
Homology
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: D7G2Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z2_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 1.120e-93
Identity = 138/168 (82.14%), Postives = 150/168 (89.29%), Query Frame = 0
Query:   41 SGSVVTLVSMDGDGFVVESSAIMVSKLLDAMLDGPSENDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTEPPIGS 208
            S   VTLVSMDGDGFVVE+SAI VSKLL AM+DGP+EN  KEIPL NMRSNVVAKVVEFCQH++ DPMT IPKP+Q+GKTV DHVQEWYSTFV+ L DEMLFE+LLA NYLDL PLLELCAATVGLRAMNKTP+E++ EFNIKE FSPEVERTLR ENKWSTEPPIGS
Sbjct:   35 SSGAVTLVSMDGDGFVVEASAIEVSKLLKAMVDGPTENAAKEIPLTNMRSNVVAKVVEFCQHHQTDPMTDIPKPVQFGKTVGDHVQEWYSTFVKALKDEMLFEMLLAANYLDLSPLLELCAATVGLRAMNKTPEEIQREFNIKEPFSPEVERTLRQENKWSTEPPIGS 202          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A836CJ49_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ49_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.590e-58
Identity = 91/174 (52.30%), Postives = 125/174 (71.84%), Query Frame = 0
Query:   35 DQQQPYSGSVVTLVSMDGDGFVVESSAIMVSKLLDAMLDGPSENDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTEPPIGS 208
            D ++      VTLV+M GD F V+ + I +S+++  ML+   E    EIPLP +R  V+AKVV++C H + +PMT+IP+PI+YG+TV+DHVQ WY+ FV  L  E LFEL+L+ NYLD+ PLL+L +A  GL  MNKTPDE+R+   I++ F+PEVER LRDE +WSTEPP+ S
Sbjct:    5 DAKRADGAGTVTLVAMGGDTFTVDRNVISLSQVIRVMLEDDGECVATEIPLPTVRGPVLAKVVDYCVHYQTEPMTEIPRPIKYGRTVADHVQPWYAEFVDALDKETLFELILSCNYLDVKPLLDLTSAVAGLMLMNKTPDEIRATLGIEQPFAPEVERQLRDEIRWSTEPPVRS 178          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A7S3XK24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK24_HETAK)

HSP 1 Score: 175 bits (443), Expect = 1.020e-51
Identity = 87/178 (48.88%), Postives = 119/178 (66.85%), Query Frame = 0
Query:   35 DQQQPYSGSVVTLVSMDGDGFVVESSAIMVSKLLDAMLDGPSE--NDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGD----EMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTEPPI 206
            + ++  +G  V L++ DGD F V    + +S+L+  M D   +  +D +EIPLPN++S V+ KV+EFC+H   + M +IP+PI+YG  V+D VQ+WY  FV  L      EMLF+L+LA NYLD+ PLL+L  ATVGL  MNKTPD++R  F I E FSPE+   L  ENKWSTEPP+
Sbjct:   28 EPEEEETGPFVNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEEFSPELYDQLLKENKWSTEPPV 205          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A7S3UW02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW02_HETAK)

HSP 1 Score: 171 bits (434), Expect = 2.480e-50
Identity = 83/177 (46.89%), Postives = 119/177 (67.23%), Query Frame = 0
Query:   36 QQQPYSGSVVTLVSMDGDGFVVESSAIMVSKLLDAMLDGP--SENDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGD----EMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTEPPI 206
            Q++  +G  V L++ DGD F V    +M+S+L+  M+D     ++D +EIPLPN++SNV+ KV+EFC++   D M  IP+PI+YG  V+D VQ+WY  +V  L +    EMLF+L+LA NYLD+  LL+L +AT+GL  MNKTPD++R    + E FSPE+   L  E KWSTEP +
Sbjct:   31 QEEEETGPFVNLITQDGDSFTVSRDIVMISELIKTMIDESLGEDDDPQEIPLPNLKSNVLVKVIEFCKYYHKDKMATIPRPIKYGLQVADVVQDWYGEYVDALVNNKEFEMLFDLVLAANYLDIKSLLDLASATIGLLIMNKTPDQIRETLGLDEEFSPEMHEQLMQEMKWSTEPAV 207          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.890e-46
Identity = 83/160 (51.88%), Postives = 112/160 (70.00%), Query Frame = 0
Query:   45 VTLVSMDGDGFVVESSAIMVSKLLDAMLDGPSEND-VKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTE 203
            V LVS +GD F VE+    +S+L+  ML    E D V+EIPLPN++S+V+ KV+EFC+H K DPMT+I KP++   T+S+ VQEWY+TFV  +  E+LFEL+LA NY+D+ PLL+L  ATV      KTP+E+R  FNI   F+PE E  +R+ENKW  E
Sbjct:   24 VQLVSQEGDNFQVEAKVAKMSELVKTMLPDEDEGDEVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLK-SSTMSEVVQEWYATFVD-VEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREENKWCEE 181          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.410e-44
Identity = 79/161 (49.07%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   41 SGSVVTLVSMDGDGFVVESSAIMVSKLLDAML-DGPSENDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKW 200
            SG VV LVS +GD + VE S   +S+L+  ML D    ++ +EIPLPN+++NV+AKV+EFC+H+K DPM  I KP++    + + VQ+WY+ FV  +  E+LFEL+LA NY+D+ PLL+L  ATV      KTP+E+R  FNI   F+PE E  +R+ENKW
Sbjct:   10 SGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDDDDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLK-SANMHEVVQDWYANFVN-VDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKW 168          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: W7TPG8_9STRA (Glycoprotein fp21 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPG8_9STRA)

HSP 1 Score: 155 bits (392), Expect = 7.530e-43
Identity = 79/161 (49.07%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   41 SGSVVTLVSMDGDGFVVESSAIMVSKLLDAML-DGPSENDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKW 200
            SG VV LVS +GD + VE S   +S+L+  ML D    ++ +EIPLPN+++NV+AKV+EFC+H+K DPM  I KP++    + + VQ+WY+ FV  +  E+LFEL+LA NY+D+ PLL+L  ATV      KTP+E+R  FNI   F+PE E  +R+ENKW
Sbjct:   58 SGKVVHLVSQEGDQYEVEVSVCKMSELVKTMLPDDDDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLK-SANMHEVVQDWYANFVN-VDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEEEAQVREENKW 216          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A6V1AYU4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6V1AYU4_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.160e-42
Identity = 75/161 (46.58%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   45 VTLVSMDGDGFVVESSAIMVSKLLDAML--DGPSENDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTE 203
            + LVS +GD F V      +S+L+ +M+  D  +E++V EIPLPN+++ V+ KV+EFCQH+K +PMT+I KP++  + ++D VQ WY+ +V  +   +LFEL+LA NY+D+ PLL+L  ATV      KTP+E+R+ FNI   FSPE E  +R+ENKW  E
Sbjct:   10 INLVSKEGDSFKVPVDVAQMSELVKSMMEDDNDTEDEVTEIPLPNVKATVLQKVIEFCQHHKEEPMTEIEKPLK-SQNMADVVQVWYANYVD-VEQVVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRTTFNISNDFSPEEEAQVREENKWCEE 168          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A7S1CWR1_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWR1_CYCTE)

HSP 1 Score: 149 bits (377), Expect = 6.470e-42
Identity = 74/160 (46.25%), Postives = 111/160 (69.38%), Query Frame = 0
Query:   45 VTLVSMDGDGFVVESSAIMVSKLLDAMLD-GPSENDVKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTE 203
            V L+S +GD F V +    +S+L+ +M++   S+ DV EIPLPN+++ ++ KV+EFC+H+K +PMT+I KP++  + ++D VQ+WY+ FV  +   +LFEL+LA NY+D+ PLL+L  ATV      KTP+E+R  FNI   FSPE E  +R+ENKW  E
Sbjct:   48 VNLISKEGDSFEVPTQVAKMSELVKSMMEEDASDEDVAEIPLPNVKAAILKKVIEFCEHHKQEPMTEIEKPLK-SQNMADVVQKWYADFVD-VEQVILFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRQTFNITNDFSPEEEAQVREENKWCEE 205          
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Match: A0A7S0C259_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C259_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.410e-42
Identity = 77/164 (46.95%), Postives = 109/164 (66.46%), Query Frame = 0
Query:   41 SGSVVTLVSMDGDGFVVESSAIMVSKLLDAMLDGPSEND-VKEIPLPNMRSNVVAKVVEFCQHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNYLDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKWSTE 203
            S   V LVS +GD + V      +S+L+  M+D   E+D V+EIPLPN+++ V++KV+EFC H+  DPMT+I KP++    +S+ VQ+WY+ FV  +   +LFEL+LA NY+D+ PLL+L  ATV      KTP+E+R  FNI   FSPE E  +R+ENKW  E
Sbjct:    6 SKQAVNLVSKEGDTYEVPLKVAKMSELVKTMMDEDGEDDEVQEIPLPNVKATVLSKVIEFCTHHGQDPMTEIEKPLK-SAIMSEVVQKWYADFVN-VEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRQTFNISNDFSPEEEAQVREENKWCEE 167          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig205.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z2_ECTSI1.120e-9382.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJ49_9STRA2.590e-5852.30Skp1 family, dimerization domain-containing protei... [more]
A0A7S3XK24_HETAK1.020e-5148.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3UW02_HETAK2.480e-5046.89Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SQM9_9STRA1.890e-4651.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D5I6_9STRA1.410e-4449.07Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TPG8_9STRA7.530e-4349.07Glycoprotein fp21 n=1 Tax=Nannochloropsis gaditana... [more]
A0A6V1AYU4_9STRA2.160e-4246.58Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S1CWR1_CYCTE6.470e-4246.25Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S0C259_9STRA8.410e-4246.95Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001232S-phase kinase-associated protein 1-likeSMARTSM00512skp1_3coord: 42..153
e-value: 1.7E-15
score: 67.5
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 41..203
e-value: 3.2E-40
score: 139.8
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 44..107
IPR016072SKP1 component, dimerisationPFAMPF01466Skp1coord: 155..200
e-value: 2.8E-12
score: 46.5
IPR016073SKP1 component, POZ domainPFAMPF03931Skp1_POZcoord: 44..104
e-value: 5.9E-15
score: 55.2
NoneNo IPR availablePIRSRPIRSR028729-50PIRSR028729-50coord: 44..203
e-value: 8.6E-30
score: 101.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..42
NoneNo IPR availablePANTHERPTHR11165:SF114SKP1-LIKE PROTEIN 13coord: 44..202
IPR016897S-phase kinase-associated protein 1PANTHERPTHR11165SKP1coord: 44..202
IPR036296SKP1-like, dimerisation domain superfamilySUPERFAMILY81382Skp1 dimerisation domain-likecoord: 126..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig205contigP-littoralis_Contig205:75984..90219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig205.11.1mRNA_P-littoralis_Contig205.11.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig205 74188..90388 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig205.11.1 ID=prot_P-littoralis_Contig205.11.1|Name=mRNA_P-littoralis_Contig205.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=209bp
MAKDAAPSLEGQKTPSSASSATGGNTGSSSSGGTDQQQPYSGSVVTLVSM
DGDGFVVESSAIMVSKLLDAMLDGPSENDVKEIPLPNMRSNVVAKVVEFC
QHNKMDPMTKIPKPIQYGKTVSDHVQEWYSTFVQGLGDEMLFELLLAGNY
LDLPPLLELCAATVGLRAMNKTPDEVRSEFNIKEAFSPEVERTLRDENKW
STEPPIGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001232SKP1-like
IPR011333SKP1/BTB/POZ_sf
IPR016072Skp1_comp_dimer
IPR016073Skp1_comp_POZ
IPR016897SKP1
IPR036296SKP1-like_dim_sf