prot_P-littoralis_Contig204.119.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig204.119.6
Unique Nameprot_P-littoralis_Contig204.119.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1094
Homology
BLAST of mRNA_P-littoralis_Contig204.119.6 vs. uniprot
Match: A0A6H5KJY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY1_9PHAE)

HSP 1 Score: 1038 bits (2684), Expect = 0.000e+0
Identity = 701/1127 (62.20%), Postives = 776/1127 (68.86%), Query Frame = 0
Query:    4 MSTRGGRGGWAGDKTKRFMMVGTKDALPAGAKTGVVAPVPINTPSLRQEIHGSQGDNTGIASINRSSSAGGWGSATGISSASEGKPANHGNAGGRGKGRGDVSSRQGGDDVFTRHFPDLRAGLKQAEKLDAVIKASSKVAPLRKPKPEPAKGQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKPEERRKPAASFADEISSKSRWAERP-QEGGPRARGGRDGDGRGAGASAWEMSKEGGR-GXXXXXXXXXXXXXXXDAFQDK-DRRSFRHNPDRSSMNNTRGKESIFGSGGHVGVANSTQDSKINGGTKTPTTTYVRQHGPPPRKITTPTSTXXXXXQHDHPPASQQPTRSSAYSASTRSSDQSQEDPWDKSTETPSKMR---PS--QQTMDTPPEASPTLNSPSSQSGTYGRAHAPPRRSGPEAQVDEHNSAASTSLSRQDRDTGGEATSRFGGSWGASEQGRGATDKESSGGVERTLSGRWKEPADSLAPPPPPTNTRWKEPKEEPRAGGRRWKVREEGQMGSGRWGRSVEEDGDVDAGSAAASSLAPSSPHSSSWKNSATDGWGLEVGKHARMDGDMSVSPSISKNLEQQ-QXXXXXXXXXXXGTGAAASCEEPAEVSDA------------NEPTGT--AAFDQQQQAQPAIPNASWEPQLPRGAGGGDLWETPGHGRNNRPPQQRSGQGGSSTTGGASQPWGDPWGTSGFGLPSSGNQSSGSMASFLEN--DEPRKERYLPPALRNRTPSQGNQEDSATVPSVDENTGTNPPSLPNVASTDLSAQDLVIPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---APLEDWQQGGTEAPHRSQQDQVGHPVESQPHQQQSIHQGHQGQPA-QPLHLHEHAHLDRGYQRNPVEGFSSFQPQDQVEPALHQFQPEHFQAQAYHNQHQTARVPLPEQHMHPPHYQSDHVSVQRHQFNNQAQIPQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLQGYQQGHQQMDMSRQTSQTPQQMHLQQRHQPMQHPSSAFMVPSQGMGYADPRGGRG-GLGGLPVHLGRSYRD-------VPPAQQQTGMPPSNVYGFQSPETQHKR 1093
            M+ RGGRGGWAGDKTKR+MMVGTKDALPAGAKTGVVAPVPINTPSLRQEI   QG+N G A+INRS S GGWGSA  +SSAS    A    A G GKGR D S RQ GDDVFTRHFPDLRAGL+QAEKLDAV KASSKVAPLRKPK EPAK QGPSLRPRAMLKPTGSAGGGS ATAAAQAAIADAVHNRVATAPKPEERR+P ASFADEIS+KSRWAERP QEGG R RG     GRG G + WEM+KE GR                 DAF +K DRRSFR N +RS+MN+TRG+ESIFGSG HVGVA+STQDS   G + TP+TTYVRQHGPPPRK  TP +T     Q + P  SQQPTRSSAYSAS  S+DQS  DPW KS ET SK R   PS  Q  MD PPEA P  +SPSSQSG+Y R   P R    E Q DE     S S SR D D GGE TSRFGGSWGA EQG+ A DK+SS G+ERT SGRWKEPA SLAPPP PTNTRWKEPKEEPRAG RRWK RE+GQMG GRWGRS  ED D+D  SAA  ++A  +  +SSWK SA DGWG++V KH R D DMS + S S+ LEQQ Q           G GA  S E+PAE  DA            +E T +   +F QQQQA P I  +SWEPQLPRGAGG DLWETP +GR++   QQ  GQ G+ST+GG+SQPW DPWGTSGFGL +SG+Q  GS+ASFL+N  +EPRK+RYLPPALRNR PS  N+E++A +P  D+   TN  SL +VAS D+SAQDLV+ GG                     XXXXXXXXX    PLE+WQQ G +A  RSQ +Q  H VE Q  QQQ +HQ HQ  PA QPLHLHEHA+L+RGYQRNP EGFSSFQPQ Q +P LHQFQ EH                 PEQH+    YQSDH+ VQR  FN Q QIPQ M       XXXXXXXXXXXXXXXX             P  Q Y QG QQ+DMSRQTSQ  QQMH+ Q H  MQHPSSAFM+PSQGMG  DPRG RG GLGGLPV +   YRD          +Q Q GM     YG QSPET HKR
Sbjct:    1 MAARGGRGGWAGDKTKRYMMVGTKDALPAGAKTGVVAPVPINTPSLRQEI---QGENAGTAAINRSGSGGGWGSAV-VSSASANSAAGQSVASGNGKGRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEISTKSRWAERPFQEGGSRVRGA----GRGTGGT-WEMNKERGRDSGQGGRGFERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSATPSTTYVRQHGPPPRKAATPATTPAPAVQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSAETLSKWRSASPSNPQPAMDAPPEAPPMPDSPSSQSGSYVRGDGPGR----EGQADER-VETSVSSSRSDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAGIERTQSGRWKEPAGSLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAGEDADIDDSSAAPPTMASPTSQNSSWKESADDGWGVKVPKHDRGDSDMSATASTSEKLEQQEQPLEGGGGSVEVGAGADVSSEKPAEGLDAXXXXXXXXXXIPSEDTTSFGGSFAQQQQAHPVISKSSWEPQLPRGAGG-DLWETPANGRDHHTQQQGPGQAGASTSGGSSQPWSDPWGTSGFGLSASGDQRPGSIASFLDNAPEEPRKDRYLPPALRNRNPSHENEEEAANIPLADQEIDTNRSSLSDVASADVSAQDLVLSGGGSMRTDSPDGSCAMKAPLYEQXXXXXXXXXXXXVPLEEWQQEGAQASRRSQHNQTAHAVEPQLQQQQPVHQSHQ--PASQPLHLHEHANLNRGYQRNPSEGFSSFQPQMQ-DPGLHQFQAEHXXXXXXXXXXXXXXXXXPEQHLPRHQYQSDHLPVQRQHFN-QVQIPQHMHPPQHSAXXXXXXXXXXXXXXXXHQGH---------PQQQVYHQG-QQLDMSRQTSQA-QQMHMHQHHLQMQHPSSAFMMPSQGMG-TDPRGARGVGLGGLPVQMAAPYRDEQXXXXXXXXSQHQAGMSAPGAYGVQSPETHHKR 1096          
BLAST of mRNA_P-littoralis_Contig204.119.6 vs. uniprot
Match: D8LK50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK50_ECTSI)

HSP 1 Score: 776 bits (2005), Expect = 1.160e-265
Identity = 583/1109 (52.57%), Postives = 624/1109 (56.27%), Query Frame = 0
Query:    4 MSTRGGRGGWAGDKTKRFMMVGTKDALPAGAKTGVVAPVPINTPSLRQEIHGSQGDNTGIASINRSSSAGGWGSATGISSASEGKPANHGNAGGRGKGRGDVSSRQGGDDVFTRHFPDLRAGLKQAEKLDAVIKASSKVAPLRKPKPEPAKGQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKPEERRKPAASFADEISSKSRWAERP-QEGGPRARGGRDGDGRGAGASAWEMSKEGGR-GXXXXXXXXXXXXXXXDAFQDK-DRRSFRHNPDRSSMNNTRGKESIFGSGGHVGVANSTQDSKINGGTKTPTTTYVRQHGPPPRKITTPTSTXXXXXQHDHPPASQQPTRSSAYSASTRSSDQSQEDPWDKSTETPSKMR---PS--QQTMDTPPEASPTLNSPSSQSGTYGRAHAPPRRSGPEAQVDEHNSAASTSLSRQDRDTGGEATSRFGGSWGASEQGRGATDKESSGGVERTLSGRWKEPADSLAPPPPPTNTRWKEPKEEPRAGGRRWKVREEGQMGSGRWGRSVEEDGDVDAGSAAASSLAPSSPHSSSWKNSATDGWGLEVGKHARMDGDMSVSPSISKNLEQQQXXXXXXXXXXXGTGAAASCEEPAEVSDANEPTGTAAFDQQQQAQPAIPNASWEPQLPRGAGGGDLWETPGHGRNNRPPQQRSGQGGSSTTGGASQPWGDPWGTSGFGLPSSGNQSSGSMASFLENDEPRKERYLPPALRNRTPSQGNQEDSATVPSVDENTGTNPPSLPNVASTDLSAQDLVIPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPLEDWQQGGTEAPHRSQQDQVGHPVESQPHQQQSIHQGHQGQPA-QPLHLHEHAHLDRGYQRNPVEGFSSFQPQ--DQVEPALHQFQPEHFQAQAYHNQHQTARVPLPEQHMHPPHYQSDHVSVQRHQFNNQAQIPQQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLQGYQQGHQQMDMSRQTSQTPQQMHLQQRHQPMQHPSSAFMVPSQGMGYADPRGGRG-GLGGLPVHLGRSYRD-------VPPAQQQTGMPPSNVYGFQSPETQHKR 1093
            M+ RGGRGGWAGDKTKR+MMVGTKDA+PAGAKTGVVAPVPINTPSLRQEI   QGDN G A+INRS S GGWGSA   SSAS    A           R D S RQ GDDVFTRHFPDLRAGL+QAEKLDAV KASSKVAPLRKPK EPAK QGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKPEERR+P ASFADEIS+KSRWAERP QEGG R RG     GRG G + WEM+KE GR                 DAF +K DRRSFR N +RS+MN+TRG+ESIFGSG HVGVA+STQDS   G +KTP+TTYVRQHGPPPRK+ TP +T     Q + P  SQQPTRSSAYSAS  S+DQS  DPW KS ETPSK R   PS  Q  MD PPEA    +SPSSQSG+Y RAH PPRRSG E Q DE     S S SR D D GGE TSRFGGSWGA EQG+ A DK+SS G+ERT SGRWKEPA SLAPPP PTNTRWKEPKEEPRAG RRWK RE+GQMG GRWGRS EED D+D                                                                                                                                                                                                            DS                                                       XXXXXXXXXX PLE+WQQGG +A  RSQQ+Q  H VE Q  QQQ +HQ HQ  PA QPLHLHEHA+LDRGYQRNP EGFSSFQPQ     +P LHQFQ EHFQAQAY NQ   +R PLPEQH+    YQSDHV VQR  FN Q QIPQ M       XXXXXXXXXXXXXXXX             P  Q Y QG QQ+DMSRQTSQ  QQMH+ Q H  MQHPSSAFM+PSQGMG  DPRG RG GLGGLPV +   YRD          +Q Q GM     YG QSPET HKR
Sbjct:    1 MAARGGRGGWAGDKTKRYMMVGTKDAVPAGAKTGVVAPVPINTPSLRQEI---QGDNAGTAAINRSGSGGGWGSAV-ASSASANSAAGQXXXXXXXXXRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKPEERRRPMASFADEISTKSRWAERPLQEGGSRGRGA----GRGTGGT-WEMNKERGRDSGQGGRGFERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSKTPSTTYVRQHGPPPRKVATPATTPAPAAQQEQPLVSQQPTRSSAYSASKPSNDQSHGDPWGKSVETPSKWRSASPSNPQPAMDAPPEAPQMPDSPSSQSGSYVRAHGPPRRSGREGQADERGET-SISSSRPDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAGIERTQSGRWKEPAGSLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAEEDADID------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSXXX----------------------------------------------------XXXXXXXXXXVPLEEWQQGGAQASRRSQQNQTAHAVEPQLQQQQPVHQSHQ--PASQPLHLHEHANLDRGYQRNPSEGFSSFQPQKHQMQDPGLHQFQAEHFQAQAYQNQQSASRGPLPEQHLPRHQYQSDHVPVQRQHFN-QVQIPQHMHPPQHSAXXXXXXXXXXXXXXXXHQGH---------PQQQVYHQG-QQLDMSRQTSQA-QQMHMHQHHLQMQHPSSAFMMPSQGMG-TDPRGARGVGLGGLPVQMATPYRDEQXXXXXXXXSQHQAGMSAPGAYGVQSPETHHKR 828          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig204.119.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJY1_9PHAE0.000e+062.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK50_ECTSI1.160e-26552.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1067..1087
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..605
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 806..861
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 635..652
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 908..922
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..1031
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1047..1093
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 884..898
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 743..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 709..725
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 938..1031
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 554..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig204contigP-littoralis_Contig204:401069..413815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig204.119.6mRNA_P-littoralis_Contig204.119.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig204 401020..414468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig204.119.6 ID=prot_P-littoralis_Contig204.119.6|Name=mRNA_P-littoralis_Contig204.119.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1094bp
MSPMSTRGGRGGWAGDKTKRFMMVGTKDALPAGAKTGVVAPVPINTPSLR
QEIHGSQGDNTGIASINRSSSAGGWGSATGISSASEGKPANHGNAGGRGK
GRGDVSSRQGGDDVFTRHFPDLRAGLKQAEKLDAVIKASSKVAPLRKPKP
EPAKGQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATAPKP
EERRKPAASFADEISSKSRWAERPQEGGPRARGGRDGDGRGAGASAWEMS
KEGGRGAAKGGREFDRGGRGGDAFQDKDRRSFRHNPDRSSMNNTRGKESI
FGSGGHVGVANSTQDSKINGGTKTPTTTYVRQHGPPPRKITTPTSTPAPT
PQHDHPPASQQPTRSSAYSASTRSSDQSQEDPWDKSTETPSKMRPSQQTM
DTPPEASPTLNSPSSQSGTYGRAHAPPRRSGPEAQVDEHNSAASTSLSRQ
DRDTGGEATSRFGGSWGASEQGRGATDKESSGGVERTLSGRWKEPADSLA
PPPPPTNTRWKEPKEEPRAGGRRWKVREEGQMGSGRWGRSVEEDGDVDAG
SAAASSLAPSSPHSSSWKNSATDGWGLEVGKHARMDGDMSVSPSISKNLE
QQQQLREGEGEVAIGTGAAASCEEPAEVSDANEPTGTAAFDQQQQAQPAI
PNASWEPQLPRGAGGGDLWETPGHGRNNRPPQQRSGQGGSSTTGGASQPW
GDPWGTSGFGLPSSGNQSSGSMASFLENDEPRKERYLPPALRNRTPSQGN
QEDSATVPSVDENTGTNPPSLPNVASTDLSAQDLVIPGGGGIRAASPDGT
TAAKPPLYEQQDQQQQQQQAPLEDWQQGGTEAPHRSQQDQVGHPVESQPH
QQQSIHQGHQGQPAQPLHLHEHAHLDRGYQRNPVEGFSSFQPQDQVEPAL
HQFQPEHFQAQAYHNQHQTARVPLPEQHMHPPHYQSDHVSVQRHQFNNQA
QIPQQMHAPQQHAQHSLHQPHQQQPPQPQQHGHQSQHGQQGHPSLQGYQQ
GHQQMDMSRQTSQTPQQMHLQQRHQPMQHPSSAFMVPSQGMGYADPRGGR
GGLGGLPVHLGRSYRDVPPAQQQTGMPPSNVYGFQSPETQHKR*
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