prot_P-littoralis_Contig203.79.8 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig203.79.8
Unique Nameprot_P-littoralis_Contig203.79.8
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length614
Homology
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BLAST of mRNA_P-littoralis_Contig203.79.8 vs. uniprot
Match: D8LQX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX9_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.950e-35
Identity = 263/535 (49.16%), Postives = 287/535 (53.64%), Query Frame = 0 
Query:    1 MQILKKLLNGP------VLLEEKQKKNKNAGLSPEKRDGMDVVGGRDSD-DGGRGGGPLGGHGGSEGRGSTDGTGRGGHEETPGDHTNGGGEMPLNNFGYPMGYAGGPGGPXGVGLGGYPMGGNPAAYGLLDFAAFHHGGPGGPASLHMPPPYQNYAPPPVGSAGGGVGSGFKGVGGYGAPFSSRMAPNPAASGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILTLNMGEGIDGPRAGAXXXXNAASFLGGIGGGLLKLSMDENGLREMRDNMAAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRPFPGPLSPFGHLPPDMQAYGPLNPGSPLAAQHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGQGDYGMVAEGVDDGDGRIVGGMEIVGHQLDQWQRKTLVDDVNDKFAGRELVQVPAFDQ 528
            MQILKKLLNGP       + +EK++K    G   E        GG+ S+ D G      GG     GRG     G GGH+  PG+    GG MPLN +GYP+         X      YPMGG     G+ DF++F HG PGGP+     PPY NY  PP G+  GG    FKGVG                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               XXXXXXXX+LTL M +  DGP  GA    +AASFL        KLSMDENGL+EMRDNMAAA  XXXXXXXXXXX             XXXXXXXXXXXX                    AGRPFPGPLSPFGHLPPDMQAYGPLNPGS      H                 XXXXXXX           XXXXXXXX      P +G  G  +EG  D DGR+VGGMEIVGHQL+QWQRK LVDD  DKFAGRELVQ+ A DQ
Sbjct:    1 MQILKKLLNGPGGAAGGKMFKEKRRKGAWPGSDKEMEGNGPFPGGKGSNGDAGAATSTRGGFDKVGGRG-----GGGGHDAAPGEAVGIGG-MPLN-YGYPLXXXXXX---XXXXXXXYPMGGGFG--GIPDFSSFQHGVPGGPSI----PPYPNYPQPPGGAPAGG----FKGVG-------------------MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANQSAGMGIISGKPAGDGRNKPPGDLDQGGXXXXXXXXMLTLTMDKEADGPTKGAGGG-SAASFLXXXXX-XXKLSMDENGLKEMRDNMAAAXXXXXXXXXXXXXDASAAEAAVGTAGXXXXXXXXXXXXVDAVAGPSGAA---------AGRPFPGPLSPFGHLPPDMQAYGPLNPGSSPHPNPHQQAYPFPPYSPTALIGGXXXXXXXAGAPTMEISLDXXXXXXXX-----APQRGPGG--SEGAGDSDGRVVGGMEIVGHQLEQWQRKMLVDDGTDKFAGRELVQLDATDQ 478
[Close]
BLAST of mRNA_P-littoralis_Contig203.79.8 vs. uniprot
Match: A0A6H5L035_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L035_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 4.480e-25
Identity = 79/145 (54.48%), Postives = 84/145 (57.93%), Query Frame = 0 
Query:  384 AGRPFPGPLSPFGHLPPDMQAYGPLNPGSPLAAQHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGQGDYGMVAEGVDDGDGRIVGGMEIVGHQLDQWQRKTLVDDVNDKFAGRELVQVPAFDQ 528
            AGRPFPGPLSPFGHLPPDMQAYGPLNPGS      H                     XXXXXXX                     P +G  G  +EGV D DGR+VGGMEIVGHQL+ WQRK LVDD  DKFAGRELVQ+ A DQ
Sbjct:  340 AGRPFPGPLSPFGHLPPDMQAYGPLNPGS----SPHPNPHQQAYPFLPYSPTALIGGXXXXXXXGAGAPTMEISLDGGSGGGVGAPQRGPGG--SEGVGDSDGRVVGGMEIVGHQLELWQRKMLVDDGTDKFAGRELVQLGATDQ 478
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.79.8 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQX9_ECTSI2.950e-3549.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L035_9PHAE4.480e-2554.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 594..614
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 526..589
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 527..589
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..428

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig203contigP-littoralis_Contig203:315155..326942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig203.79.8mRNA_P-littoralis_Contig203.79.8Pylaiella littoralis U1_48mRNAP-littoralis_Contig203 315155..326942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig203.79.8 ID=prot_P-littoralis_Contig203.79.8|Name=mRNA_P-littoralis_Contig203.79.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=614bp
MQILKKLLNGPVLLEEKQKKNKNAGLSPEKRDGMDVVGGRDSDDGGRGGG
PLGGHGGSEGRGSTDGTGRGGHEETPGDHTNGGGEMPLNNFGYPMGYAGG
PGGPGGVGLGGYPMGGNPAAYGLLDFAAFHHGGPGGPASLHMPPPYQNYA
PPPVGSAGGGVGSGFKGVGGYGAPFSSRMAPNPAASGAPAASQQEQSQAA
AYAAAYAAAATSHAAANTHSAAAVGRMTTPSNQAGDDGRNHASGAEQGGK
GGPAGGFSGGGGGSGGGGGGGILTLNMGEGIDGPRAGAGGGGNAASFLGG
IGGGLLKLSMDENGLREMRDNMAAAAKIVKQHHAGGGSSEASTEVGASAG
GAGGTAGGGGGEGGGGGAATAGAGCESAAAAAAAGRPFPGPLSPFGHLPP
DMQAYGPLNPGSPLAAQHHHHHHHEYAYPFPPYSPTPLLGTGSGLPPPDG
VTSMEMSLGGGGGGGGGLPGQGDYGMVAEGVDDGDGRIVGGMEIVGHQLD
QWQRKTLVDDVNDKFAGRELVQVPAFDQTSGGGQRLAGSTQGFSSAPPPT
AATTSGSASGSGRANVADATTTAIGSTRPSSLPAPTPVLTYDSLVAQQQQ
QHELQLQQQQQQQQ
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