prot_P-littoralis_Contig203.65.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig203.65.1
Unique Nameprot_P-littoralis_Contig203.65.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1427
Homology
BLAST of mRNA_P-littoralis_Contig203.65.1 vs. uniprot
Match: D8LQY7_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY7_ECTSI)

HSP 1 Score: 533 bits (1372), Expect = 2.320e-159
Identity = 374/696 (53.74%), Postives = 424/696 (60.92%), Query Frame = 0
Query:   33 KSRQQDRPRVWEAEAEWRSALPSRLGALAEVATVDDVGEEPSELRKAWMWYDRPAVAKMLNDVADSMAATGFNEEAADLFERCVDIYLCYAGPRGHGGIAQALNDLGYVLWDACANPIFVGQDVAEDLACALIANAEEVFRLALSESYTASGRIHHFAATCLSNLADCASARLAHEEAASLCRWAFQVRHDCLGPKHLDTADTLRKLGGMLHRQGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIRAGASGPNDLAPFCYNLALVVGTNARKGPVEKLEQGQRESEALLTEALMVYQNGLPPDHPEIADCMDKLAGAVAMNGDLSRAEILHXXXXXXXXXXXXXXXXXXXXXXFNLSAVVGGQRGRLGETENILQRCLDAQKRLYGLGHPEVSMVLDKLADVIRARDAASI-------CPPNSNDHXXXXXXXXXXXXXXXXXXSYHHSLTASRRNGMSQSWWDTRSSITSRGSDWFGSGHNSRQSPLDYLGGGDGREAERAFGGGGLDGXXXXXXXXXXXXXXXXXGIAGIGKDGAISEEESGALPAGQVGEGLPSSKGGEQEQEQIGRIVESSGAVRDGGSAXXXXXXXXXXXGDARPPLPRNVTTADDGMQGNIRVGMRFVAASPTKGSGRR---ALQGAKMGSFFDVYSRGNSRRGQSHSSSS 718
            + R+++    WEAE EWRSALP+RL ALA++A+++ +GEEPSELRKAWMW DRP VAKMLNDVADSMAA GF+++AADLFERCV+IYL Y GP GHG IA+ALNDLGYVLWDACANP+F+GQDVAED+AC L+ANAEEVFRLAL E  +  G  H FAATCLSNLADCASARLAHEEA  LC+WA  VR +CLGPK LDTADTLRKLGG+LHRQG L                                                       R +AGA GP+D APFCYNLALVVGTNARKGP EKL+QG RE++AL+TEALMVYQ  LPPDHPE ADCMDKLA AVAM GDL+ AEILH  XXXXXXXXXXXXXXXXXX  FNLSAVVG QRGRLGETENIL+RCL+AQ+RL+G  HPEV +VL KL D+IR     S          PNS           XXXXXXXXXX                       SI  RG   FGS  + R S                        XXXXXXXXXXXXXXXXXG+AGIGKDGAI EE+                         IGR+   +G        XXXXX                     DGMQG IR+G  F +A P          A +   + SFF++YS+GNSR     +SSS
Sbjct:  354 RGREREXXXAWEAEVEWRSALPARLEALAKLASMERIGEEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLVYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCASARLAHEEATLLCQWALHVREECLGPKDLDTADTLRKLGGLLHRQGLLEEARVNYLRARDVFVEVLGPDHEDVGSALNLLAVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHREXXXXXXXXXXXXXXXXXXVLFNLSAVVGAQRGRLGETENILRRCLEAQERLHGPDHPEVDLVLGKLHDIIRFDSVTSAGGSSLFGSVPNSRGRNGFFASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGRSIH-RGGSGFGS-FSGRSSXXXXX-----------------XXXXXXXXXXXXXXXXXXXGLAGIGKDGAIPEED-------------------------IGRVSSEAGXXXXXXXXXXXXX------------XXXXXXXXXDGMQGGIRIGPWFASAPPMXXXXXXXGSAYRRGHLASFFEMYSKGNSRHSGDGTSSS 993          
BLAST of mRNA_P-littoralis_Contig203.65.1 vs. uniprot
Match: A0A6H5LDX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX5_9PHAE)

HSP 1 Score: 535 bits (1377), Expect = 6.950e-157
Identity = 403/847 (47.58%), Postives = 460/847 (54.31%), Query Frame = 0
Query:   42 VWEAEAEWRSALPSRLGALAEVATVDDVGE-------------------------EPSELRKAWMWYDRPAVAKMLNDVADSMAATGFNEEAADLFERCVDIYLCYAGPRGHGGIAQALNDLGYVLWDACANPIFVGQDVAEDLACALIANAEEVFRLALSESYTASGRIHHFAATCLSNLADCA-------------------------------------------------------------------SARLAHEEAASLCRWAFQVRHDCLGPKHLDTADTLRKLGGMLHRQGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIRAGASGPNDLAPFCYNLALVVGTNARKGPVEKLEQGQRESEALLTEALMVYQNGLPPDHPEIADCMDKLAGAVAMNGDLSRAEILHXXXXXXXXXXXXXXXXXXXXXXFNLSAVVGGQRGRLGETENILQRCLDAQKRLYGLGHPEVSMVLDKLADVIRARDAASICPPNSNDHXXXXXXXXXXXXXXXXXXSY-------------HHSLTASRRNGMS-QSWWDTRSSITSRGSDWFGSGHNSRQSPLDYLGG----GDGREAERAFGG------------------------GGLDGXXXXXXXXXXXXXXXXXGIAGIGKDGAISEEESGALPAGQVGEGLPSSKGGEQEQEQIGRIVESSGAVRDGGSAXXXXXXXXXXXGDARPPLPRNVTTADDGMQGNIRVGMRFVAASPTK---GSGRRALQGAKMGSFFDVYSRGNSR--RGQSHSSSSICSLDIGVEKEAGANRGDRSKVTPLRRNSRR 749
             WEAE EWRSALP+RL ALA++A+++ +GE                         EPSELRKAWMW DRP VAKMLNDVADSMAA GF+++AADLFERCV+IYL Y GP GHG IA+ALNDLGYVLWDACANP+F+GQDVAED+AC L+ANAEEVFRLAL E  +  G  H FAATCLSNLADCA                                                                   SARLAHEEA  LC+WA  VR +CLGPKHLDTADTLRKLGG+LHRQG L                                                       R +AGA GP+D APFCYNLALVVGTNARKGP EKL+QG RE++AL+TEALMVYQ  LPPDHPE ADCMDKLA AVAM GDL+ AEILH        XXXXXXXX      FNLSAVVG QRGRLGETENIL+                      KL D+IRARDA SIC  N N H XXXXXXXXXXXXXXXXX               ++ LTASRRNGMS  SWW+  S  ++ GS  FGS  NSR     +  G    G G ++  +  G                             XXXXXXXXXXXXXXXXXG+AGIGKDGAI EE+ G +          SS+ G  +Q   G  V+S                                   DDGMQG IR+G RF +A   +    SG  A +   + SFF++YS+GNSR  RG S SSSSICS D   E   GANRG++  ++P+RRNSRR
Sbjct:  613 AWEAEVEWRSALPARLEALAKLASMERIGEGAFGQVGLTSCLRCLMLAVLPVVAAEPSELRKAWMWNDRPGVAKMLNDVADSMAAAGFHDQAADLFERCVEIYLAYTGPEGHGEIAEALNDLGYVLWDACANPVFIGQDVAEDMACTLMANAEEVFRLALFECGSCPGGDHPFAATCLSNLADCARLTWLTRHAALPPXXXXXXXXXRRAECLWSEEFFEISVVCAKYCSPPSPSPSPPCLLQPETTHSKIQSARLAHEEATLLCQWALHVREECLGPKHLDTADTLRKLGGLLHRQGLLEEARVNYLRACDVFVEVLGPDHEDVGSALNLLAVVVGEQGDYLTAENYHRLALEQRRKAGACGPDDFAPFCYNLALVVGTNARKGPPEKLDQGHREAKALMTEALMVYQRSLPPDHPETADCMDKLAAAVAMTGDLTGAEILHREALSSMEXXXXXXXXRIAEVLFNLSAVVGAQRGRLGETENILRXXXXXXXXXXXXXXXXXXXXXGKLHDIIRARDAVSICHSN-NSHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNPLTASRRNGMSPSSWWEFDSVTSAGGSSLFGSVPNSRGRNGFFASGXXXXGRGPKSRGSPHGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAGIGKDGAIPEEDIGRV----------SSEAGGPQQPPGGEGVDSX--------------------------XXXXXXRKDDGMQGGIRIGARFASAPSMRRRRSSGGSAYRRGHLASFFEMYSKGNSRHRRGDS-SSSSICSFDSPAEDSGGANRGNKKGISPVRRNSRR 1421          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig203.65.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQY7_ECTSI2.320e-15953.74TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LDX5_9PHAE6.950e-15747.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 191..224
e-value: 140.0
score: 4.8
coord: 233..266
e-value: 0.28
score: 20.2
coord: 275..308
e-value: 54.0
score: 8.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 233..266
score: 8.2899
NoneNo IPR availablePFAMPF13424TPR_12coord: 231..302
e-value: 2.3E-15
score: 56.7
NoneNo IPR availablePFAMPF13374TPR_10coord: 369..408
e-value: 0.0044
score: 16.8
coord: 423..452
e-value: 0.001
score: 18.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 472..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1360..1392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1328..1345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..945
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1238..1259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 915..945
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1292..1345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1407..1427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1294..1316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1235..1260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 959..1008
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1134..1208
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 344..420
coord: 127..302
coord: 266..396
coord: 387..467
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 344..420
coord: 127..302
coord: 266..396
coord: 387..467
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 340..471
e-value: 1.9E-23
score: 84.9
coord: 160..339
e-value: 2.4E-34
score: 120.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 187..325
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 345..463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig203contigP-littoralis_Contig203:224145..238577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig203.65.1mRNA_P-littoralis_Contig203.65.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig203 224145..238578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig203.65.1 ID=prot_P-littoralis_Contig203.65.1|Name=mRNA_P-littoralis_Contig203.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1427bp
LAPSSAGVGAGASVFEGAGTAAAAAEAAEAAMKSRQQDRPRVWEAEAEWR
SALPSRLGALAEVATVDDVGEEPSELRKAWMWYDRPAVAKMLNDVADSMA
ATGFNEEAADLFERCVDIYLCYAGPRGHGGIAQALNDLGYVLWDACANPI
FVGQDVAEDLACALIANAEEVFRLALSESYTASGRIHHFAATCLSNLADC
ASARLAHEEAASLCRWAFQVRHDCLGPKHLDTADTLRKLGGMLHRQGELE
EAEAVYMQALDIFSEMLGNDHEDVGSALNLLAVVVGEQGRYLEAENYHRQ
ALGQRIRAGASGPNDLAPFCYNLALVVGTNARKGPVEKLEQGQRESEALL
TEALMVYQNGLPPDHPEIADCMDKLAGAVAMNGDLSRAEILHRESLSIME
RTLDPDDPRIAEVLFNLSAVVGGQRGRLGETENILQRCLDAQKRLYGLGH
PEVSMVLDKLADVIRARDAASICPPNSNDHEHPPGAGAGAGAGGGGGGSY
HHSLTASRRNGMSQSWWDTRSSITSRGSDWFGSGHNSRQSPLDYLGGGDG
REAERAFGGGGLDGGGGNGITGGSGRIGGGSGIAGIGKDGAISEEESGAL
PAGQVGEGLPSSKGGEQEQEQIGRIVESSGAVRDGGSAAVAATAAAAAAG
DARPPLPRNVTTADDGMQGNIRVGMRFVAASPTKGSGRRALQGAKMGSFF
DVYSRGNSRRGQSHSSSSICSLDIGVEKEAGANRGDRSKVTPLRRNSRRG
AAFRRGAGSSSGNRIRKPGRGSKRVGKSGSRVGERGGSGRLGGGSGKNEV
GDAEGKGGRSARGLVAARPKGSSAGASSARRSLSGLERDIPRPRPVSYPA
SVSTRVVRRGSGSAVGGSGIVAGVDLVRGVSRGSIKGKGGGGGGGGRKKS
SKSARRRRSGSRSGSYSEADESSLSELSSPSSESDPLSDGSWSASSSLVS
SSVLSRSRYSSGSGGGEDEYASIGDVPSLHGDEVVQPVGVSERKRQGDDG
NNNNNKNISAFAVNSDHIIDAEYSKATNCWSDGVFETSGDSTSGKSGSGH
ATAAAAAAAAGAAAASLLSRQGHAKTASAAATAALLVAPPFQAAPADAPL
SPDALTARSGLGLVGGVGGTAAATAATVPQTSSADIGKGTSADQPAGGLR
RRAKALTGAFRRRGAPQQPTPDSAAFMAGKAGSAEGGGRPSDGDAAVPSP
HPTGAPMAALGALPAFSLSSTNPAAQVELQLPTNLINREGREKGEDYDEH
RKGGEHRGADAVAAEQGMTSATAAAGRSISLRDAPIPWGANFGRELSENS
SAGSNPDSSGNVDIGDTSDDTEGVAGGMGQRSGSSRSTVRRMLGTPSVNV
TVSDAAVWAPDDEDKGAIGGKGGGGGGGGRRGSTGRRSVGGVLSAVVPMA
AAALSKVNAGLRDGKADRRSSNSSSAT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf