prot_P-littoralis_Contig203.27.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig203.27.3
Unique Name	prot_P-littoralis_Contig203.27.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	303

Homology

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BLAST of mRNA_P-littoralis_Contig203.27.3 vs. uniprot
Match: D8LQZ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQZ3_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 7.310e-31
Identity = 133/323 (41.18%), Postives = 164/323 (50.77%), Query Frame = 0

Query:    1 MGNKASILFGGGTLNDISDTEEAAPLG--CARGSKSTRPVALSAQEQAVADAEAKQYSELFGGKPKVKA---------SVAGGERRSARKPAPXXXXXXXXXXXXXXXXXXQRSDPGLDLHARSAKGXXXXXXXXXXXXXXXXXXXXXX--DSAPASPYRGKASWMGGKPARVGGGGEAEGGKECVAETSQQQQQQDLVKAVSAKITDLEKEKGKTDTGNGEERREGEKTDEGTAQTVAAFYG---DGGYDRAAVANALFAGVEPSAISSKEVMLALG------INGGGLGGVMQGEASVAAAMPVARSTSPRPAPQRNFKLK 301
            MGNKAS+LFG G  N +SDTEE  P G     GSKSTRP A++A+EQA    E  +YSELFGGKPK            +  G   RS   PA     XXXXXXXXXXXXXX            +  G                        DS P SPYRGKA+W  G PA  GG G+  G K+C    +++++Q+ L  A+SAKITDLEK  G    G G     G+  + GT + VAA  G   D    RAAV NALFAG EP+   SKE+++++G                        +    ++TSPRPAPQRN+KLK
Sbjct:    1 MGNKASVLFGTGPQNIMSDTEEG-PSGETAVGGSKSTRPAAMTAEEQA----EQTRYSELFGGKPKXXXXXXXXXGXXASEGRSTRSTTAPAKRKPAXXXXXXXXXXXXXXXXXXXXXXXXXXTESGGATRAPEGEHDRYASGDEGRGEGGDSDPGSPYRGKAAWAVGTPAAAGGKGK--GDKQCAPAVTKEERQKKLAAAISAKITDLEKGAG---DGGGRGAPAGQ--EHGTREPVAAVAGGATDAARARAAVTNALFAGAEPTGRPSKELLVSVGGXXXXXXXXXXXXXXXXXXXXXXXSGVTGKNTSPRPAPQRNYKLK 311

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig203.27.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig203.27.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LQZ3_ECTSI	7.310e-31	41.18	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 179..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..222

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig203	contig	P-littoralis_Contig203:107872..127640 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig203.27.3	mRNA_P-littoralis_Contig203.27.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig203 105079..127706 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig203.27.3 ID=prot_P-littoralis_Contig203.27.3|Name=mRNA_P-littoralis_Contig203.27.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=303bp
MGNKASILFGGGTLNDISDTEEAAPLGCARGSKSTRPVALSAQEQAVADA
EAKQYSELFGGKPKVKASVAGGERRSARKPAPSKKKTAAASHQQQQKKKK
QRSDPGLDLHARSAKGGGGGNNSNTTDGVTAEGGGGGGDSAPASPYRGKA
SWMGGKPARVGGGGEAEGGKECVAETSQQQQQQDLVKAVSAKITDLEKEK
GKTDTGNGEERREGEKTDEGTAQTVAAFYGDGGYDRAAVANALFAGVEPS
AISSKEVMLALGINGGGLGGVMQGEASVAAAMPVARSTSPRPAPQRNFKL
KN*